Literature DB >> 22658724

Replication-independent repair of DNA interstrand crosslinks.

Hannah L Williams1, Max E Gottesman, Jean Gautier.   

Abstract

DNA interstrand crosslinks (ICLs) are cytotoxic lesions that covalently link opposite strands of the DNA helix and block DNA unwinding. ICLs are repaired during and outside S phase, and replication-independent ICL repair (RIR) is critical to maintain genomic integrity and to allow transcription in nondividing or slowly dividing cells. Here, we show that the Y family DNA polymerase kappa (Pol κ) is essential for RIR of a site-specific ICL lesion in Xenopus egg extracts, and that both its catalytic activity and UBZ domains are required for this function. We also demonstrate a requirement for PCNA and its modification on lysine 164. Finally, we show that Pol κ participates in ICL repair in mammalian cells, particularly in G0. Our results identify key components of the RIR pathway and begin to unravel its mechanism.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22658724      PMCID: PMC3666337          DOI: 10.1016/j.molcel.2012.05.001

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  52 in total

1.  Purification and characterization of pol kappa, a DNA polymerase encoded by the human DINB1 gene.

Authors:  V L Gerlach; W J Feaver; P L Fischhaber; E C Friedberg
Journal:  J Biol Chem       Date:  2001-01-05       Impact factor: 5.157

Review 2.  Translesion DNA synthesis polymerases in DNA interstrand crosslink repair.

Authors:  The Vinh Ho; Orlando D Schärer
Journal:  Environ Mol Mutagen       Date:  2010-07       Impact factor: 3.216

3.  DNA replication in nucleus-free Xenopus egg extracts.

Authors:  Ronald Lebofsky; Tatsuro Takahashi; Johannes C Walter
Journal:  Methods Mol Biol       Date:  2009

4.  Mutation enhancement by DINB1, a mammalian homologue of the Escherichia coli mutagenesis protein dinB.

Authors:  T Ogi; T Kato; T Kato; H Ohmori
Journal:  Genes Cells       Date:  1999-11       Impact factor: 1.891

Review 5.  Translesion synthesis in mammalian cells.

Authors:  Alan R Lehmann
Journal:  Exp Cell Res       Date:  2006-06-20       Impact factor: 3.905

6.  Fidelity and processivity of DNA synthesis by DNA polymerase kappa, the product of the human DINB1 gene.

Authors:  E Ohashi; K Bebenek; T Matsuda; W J Feaver; V L Gerlach; E C Friedberg; H Ohmori; T A Kunkel
Journal:  J Biol Chem       Date:  2000-12-15       Impact factor: 5.157

Review 7.  Protein-PCNA interactions: a DNA-scanning mechanism?

Authors:  Z Kelman; J Hurwitz
Journal:  Trends Biochem Sci       Date:  1998-07       Impact factor: 13.807

8.  Role for DNA polymerase kappa in the processing of N2-N2-guanine interstrand cross-links.

Authors:  Irina G Minko; Michael B Harbut; Ivan D Kozekov; Albena Kozekova; Petra M Jakobs; Susan B Olson; Robb E Moses; Thomas M Harris; Carmelo J Rizzo; R Stephen Lloyd
Journal:  J Biol Chem       Date:  2008-04-22       Impact factor: 5.157

9.  Three DNA polymerases, recruited by different mechanisms, carry out NER repair synthesis in human cells.

Authors:  Tomoo Ogi; Siripan Limsirichaikul; René M Overmeer; Marcel Volker; Katsuya Takenaka; Ross Cloney; Yuka Nakazawa; Atsuko Niimi; Yoshio Miki; Nicolaas G Jaspers; Leon H F Mullenders; Shunichi Yamashita; Maria I Fousteri; Alan R Lehmann
Journal:  Mol Cell       Date:  2010-03-12       Impact factor: 17.970

10.  Identification of the FANCI protein, a monoubiquitinated FANCD2 paralog required for DNA repair.

Authors:  Agata Smogorzewska; Shuhei Matsuoka; Patrizia Vinciguerra; E Robert McDonald; Kristen E Hurov; Ji Luo; Bryan A Ballif; Steven P Gygi; Kay Hofmann; Alan D D'Andrea; Stephen J Elledge
Journal:  Cell       Date:  2007-04-05       Impact factor: 41.582

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  36 in total

Review 1.  The differences between ICL repair during and outside of S phase.

Authors:  Hannah L Williams; Max E Gottesman; Jean Gautier
Journal:  Trends Biochem Sci       Date:  2013-07-03       Impact factor: 13.807

Review 2.  DNA repair pathways in human multiple myeloma: role in oncogenesis and potential targets for treatment.

Authors:  Claire Gourzones-Dmitriev; Alboukadel Kassambara; Surinder Sahota; Thierry Rème; Jérôme Moreaux; Pascal Bourquard; Dirk Hose; Philippe Pasero; Angelos Constantinou; Bernard Klein
Journal:  Cell Cycle       Date:  2013-08-09       Impact factor: 4.534

3.  DNA Damage Response in Xenopus laevis Cell-Free Extracts.

Authors:  Tomas Aparicio Casado; Jean Gautier
Journal:  Methods Mol Biol       Date:  2021

Review 4.  Cell-free Xenopus egg extracts for studying DNA damage response pathways.

Authors:  Steven Cupello; Christine Richardson; Shan Yan
Journal:  Int J Dev Biol       Date:  2016       Impact factor: 2.203

5.  Regulation of the Rev1-pol ζ complex during bypass of a DNA interstrand cross-link.

Authors:  Magda Budzowska; Thomas G W Graham; Alexandra Sobeck; Shou Waga; Johannes C Walter
Journal:  EMBO J       Date:  2015-06-12       Impact factor: 11.598

6.  Repair and translesion synthesis of O 6-alkylguanine DNA lesions in human cells.

Authors:  Hua Du; Pengcheng Wang; Lin Li; Yinsheng Wang
Journal:  J Biol Chem       Date:  2019-06-05       Impact factor: 5.157

Review 7.  The control of DNA repair by the cell cycle.

Authors:  Nicole Hustedt; Daniel Durocher
Journal:  Nat Cell Biol       Date:  2016-12-23       Impact factor: 28.824

8.  UHRF1 contributes to DNA damage repair as a lesion recognition factor and nuclease scaffold.

Authors:  Yanyan Tian; Manikandan Paramasivam; Gargi Ghosal; Ding Chen; Xi Shen; Yaling Huang; Shamima Akhter; Randy Legerski; Junjie Chen; Michael M Seidman; Jun Qin; Lei Li
Journal:  Cell Rep       Date:  2015-03-26       Impact factor: 9.423

Review 9.  REV1 and DNA polymerase zeta in DNA interstrand crosslink repair.

Authors:  Shilpy Sharma; Christine E Canman
Journal:  Environ Mol Mutagen       Date:  2012-10-13       Impact factor: 3.216

10.  Mouse DNA polymerase kappa has a functional role in the repair of DNA strand breaks.

Authors:  Xiuli Zhang; Lingna Lv; Qian Chen; Fenghua Yuan; Ting Zhang; Yeran Yang; Hui Zhang; Yun Wang; Yan Jia; Liangyue Qian; Benjamin Chen; Yanbin Zhang; Errol C Friedberg; Tie-Shan Tang; Caixia Guo
Journal:  DNA Repair (Amst)       Date:  2013-03-21
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