Literature DB >> 22606141

4,4'-Bipyridine-trans,trans-hexa-2,4-dienedioic acid (1/1).

Suk-Hee Moon, Ki-Min Park.   

Abstract

The title cocrystal, C(10)H(8)N(2)·C(6)H(6)O(4), crystallizes with half-mol-ecules of 4,4'-bipyridine and trans,trans-hexa-2,4-dienedioic acid in the asymmetric unit, as each is located about a crystallographic inversion center. The bipyridine molecule is planar from symmetry. In the dicarboxylic acid molecule, the O-C-C-C torsion angle is -13.0 (2)°. In the crystal, O-H⋯N and C-H⋯O hydrogen bonds generate a three-dimensional network.

Entities:  

Year:  2012        PMID: 22606141      PMCID: PMC3344138          DOI: 10.1107/S1600536812012391

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For cocrystals of carb­oxy­lic acid and pyridine, see: Bhogala & Nangia (2003 ▶); Hou et al. (2008 ▶); Jiang & Hou (2012 ▶). For background to the applications of cocrystals, see: Bhogala & Nangia (2003 ▶); Gao et al. (2004 ▶); Hori et al. (2009 ▶); Weyna et al. (2009 ▶).

Experimental

Crystal data

C10H8N2·C6H6O4 M = 298.29 Triclinic, a = 5.8481 (5) Å b = 7.6348 (6) Å c = 8.4677 (7) Å α = 91.837 (5)° β = 92.584 (5)° γ = 111.907 (4)° V = 349.93 (5) Å3 Z = 1 Mo Kα radiation μ = 0.10 mm−1 T = 173 K 0.40 × 0.26 × 0.24 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.960, T max = 0.976 5973 measured reflections 1517 independent reflections 1336 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.116 S = 1.04 1517 reflections 104 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.24 e Å−3 Δρmin = −0.25 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812012391/sj5219sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812012391/sj5219Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812012391/sj5219Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H8N2·C6H6O4Z = 1
Mr = 298.29F(000) = 156
Triclinic, P1Dx = 1.415 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.8481 (5) ÅCell parameters from 4151 reflections
b = 7.6348 (6) Åθ = 2.4–28.4°
c = 8.4677 (7) ŵ = 0.10 mm1
α = 91.837 (5)°T = 173 K
β = 92.584 (5)°Block, colourless
γ = 111.907 (4)°0.40 × 0.26 × 0.24 mm
V = 349.93 (5) Å3
Bruker APEXII CCD diffractometer1517 independent reflections
Radiation source: fine-focus sealed tube1336 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.031
φ and ω scansθmax = 27.0°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −7→7
Tmin = 0.960, Tmax = 0.976k = −9→9
5973 measured reflectionsl = −10→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.116H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0688P)2 + 0.0753P] where P = (Fo2 + 2Fc2)/3
1517 reflections(Δ/σ)max < 0.001
104 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.05949 (18)1.05053 (14)0.23387 (13)0.0414 (3)
H10.184 (4)0.987 (3)0.271 (3)0.084 (7)*
O20.37461 (17)1.23144 (14)0.09959 (12)0.0394 (3)
C10.1653 (2)1.18769 (18)0.13952 (14)0.0285 (3)
C2−0.0033 (2)1.28402 (18)0.09016 (15)0.0299 (3)
H2−0.17401.22620.10770.036*
C30.0786 (2)1.44912 (17)0.02208 (14)0.0288 (3)
H30.24851.50310.00130.035*
N10.3031 (2)0.85144 (15)0.34658 (13)0.0331 (3)
C40.2266 (3)0.7745 (2)0.48325 (17)0.0374 (3)
H40.11610.81500.53890.045*
C50.3007 (3)0.6385 (2)0.54775 (16)0.0350 (3)
H50.24190.58820.64580.042*
C60.4615 (2)0.57572 (16)0.46878 (14)0.0262 (3)
C70.5464 (3)0.6613 (2)0.32875 (16)0.0351 (3)
H70.66110.62700.27190.042*
C80.4627 (3)0.79683 (19)0.27252 (16)0.0362 (3)
H80.52240.85320.17660.043*
U11U22U33U12U13U23
O10.0346 (5)0.0401 (6)0.0593 (7)0.0222 (4)0.0127 (5)0.0259 (5)
O20.0314 (5)0.0469 (6)0.0488 (6)0.0229 (4)0.0109 (4)0.0174 (5)
C10.0283 (6)0.0293 (6)0.0319 (6)0.0148 (5)0.0032 (5)0.0056 (5)
C20.0260 (6)0.0327 (7)0.0355 (6)0.0156 (5)0.0037 (5)0.0077 (5)
C30.0270 (6)0.0324 (6)0.0316 (6)0.0156 (5)0.0042 (5)0.0067 (5)
N10.0322 (6)0.0287 (6)0.0407 (6)0.0141 (5)−0.0015 (5)0.0074 (4)
C40.0397 (7)0.0387 (7)0.0434 (7)0.0248 (6)0.0073 (6)0.0078 (6)
C50.0406 (7)0.0390 (7)0.0339 (7)0.0234 (6)0.0080 (5)0.0106 (5)
C60.0253 (6)0.0255 (6)0.0291 (6)0.0110 (5)−0.0015 (5)0.0030 (5)
C70.0372 (7)0.0377 (7)0.0373 (7)0.0205 (6)0.0084 (5)0.0114 (6)
C80.0395 (7)0.0351 (7)0.0382 (7)0.0176 (6)0.0055 (6)0.0135 (6)
O1—C11.3162 (15)C4—C51.3839 (18)
O1—H11.06 (2)C4—H40.9500
O2—C11.2096 (16)C5—C61.3907 (17)
C1—C21.4873 (16)C5—H50.9500
C2—C31.3310 (18)C6—C71.3929 (18)
C2—H20.9500C6—C6ii1.492 (2)
C3—C3i1.452 (2)C7—C81.3872 (17)
C3—H30.9500C7—H70.9500
N1—C81.3286 (17)C8—H80.9500
N1—C41.3337 (18)
C1—O1—H1110.3 (13)C5—C4—H4118.5
O2—C1—O1124.23 (11)C4—C5—C6119.86 (12)
O2—C1—C2124.24 (11)C4—C5—H5120.1
O1—C1—C2111.52 (10)C6—C5—H5120.1
C3—C2—C1121.76 (12)C5—C6—C7116.57 (11)
C3—C2—H2119.1C5—C6—C6ii121.53 (14)
C1—C2—H2119.1C7—C6—C6ii121.90 (14)
C2—C3—C3i123.31 (15)C8—C7—C6119.78 (12)
C2—C3—H3118.3C8—C7—H7120.1
C3i—C3—H3118.3C6—C7—H7120.1
C8—N1—C4117.62 (11)N1—C8—C7123.05 (12)
N1—C4—C5123.05 (12)N1—C8—H8118.5
N1—C4—H4118.5C7—C8—H8118.5
O2—C1—C2—C3−13.0 (2)C4—C5—C6—C6ii−177.69 (14)
O1—C1—C2—C3166.14 (12)C5—C6—C7—C8−2.2 (2)
C1—C2—C3—C3i−177.53 (14)C6ii—C6—C7—C8177.72 (14)
C8—N1—C4—C5−1.8 (2)C4—N1—C8—C71.8 (2)
N1—C4—C5—C6−0.3 (2)C6—C7—C8—N10.2 (2)
C4—C5—C6—C72.3 (2)
D—H···AD—HH···AD···AD—H···A
O1—H1···N11.06 (2)1.58 (2)2.6148 (14)164 (2)
C2—H2···O2iii0.952.653.5130 (15)151
C3—H3···O2iv0.952.583.4457 (16)152
C4—H4···O1v0.952.583.4848 (17)160
C8—H8···O2vi0.952.563.3555 (17)141
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N11.06 (2)1.58 (2)2.6148 (14)164 (2)
C2—H2⋯O2i0.952.653.5130 (15)151
C3—H3⋯O2ii0.952.583.4457 (16)152
C4—H4⋯O1iii0.952.583.4848 (17)160
C8—H8⋯O2iv0.952.563.3555 (17)141

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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