| Literature DB >> 21202722 |
Gui-Ge Hou1, Li-Li Liu, Jian-Ping Ma, Ru-Qi Huang, Yu-Bin Dong.
Abstract
The title compound, C(12)H(8)N(4)O(2)·C(8)H(6)O(4), was synthesized from 4-[5-(4-pyrid-yl)-1,3,4-oxadiazol-2-yl]pyridine N-oxide and isophthalic acid. The two mol-ecules are linked through O-H⋯O and O-H⋯N hydrogen bonds. Weak intra-molecular π-π inter-actions between the two hydrogen-bonded chains result in the formation a one-dimensional supra-molecular curved tape (the face-to-face distance between the pyridine N-oxide ring and the benzene ring is 3.7 Å).Entities:
Year: 2008 PMID: 21202722 PMCID: PMC2961495 DOI: 10.1107/S1600536808012622
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H8N4O2·C8H6O4 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 893 reflections | |
| θ = 3.2–21.1º | |
| µ = 0.11 mm−1 | |
| α = 93.003 (4)º | |
| β = 98.481 (3)º | Bar, colourless |
| γ = 112.745 (4)º | 0.30 × 0.15 × 0.06 mm |
| Bruker SMART APEX diffractometer | 1972 reflections with |
| Radiation source: fine-focus sealed tube | |
| Monochromator: graphite | θmax = 25.0º |
| θmin = 3.1º | |
| φ and ω scans | |
| Absorption correction: none | |
| 4661 measured reflections | |
| 3189 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max = 0.001 | |
| 3189 reflections | Δρmax = 0.30 e Å−3 |
| 272 parameters | Δρmin = −0.15 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.7708 (3) | 0.9021 (3) | 0.64281 (9) | 0.0693 (6) | |
| O2 | 1.0221 (3) | 0.8709 (4) | 0.59557 (10) | 0.0861 (7) | |
| O5 | −0.2941 (3) | 0.2221 (4) | −0.02763 (9) | 0.0882 (8) | |
| O3 | 0.8643 (3) | 1.0843 (3) | 0.88695 (9) | 0.0738 (6) | |
| H3 | 0.8309 | 1.1276 | 0.9203 | 0.111* | |
| O4 | 1.1774 (3) | 1.2181 (3) | 0.95238 (9) | 0.0726 (6) | |
| C1 | −0.4071 (4) | 0.2792 (4) | 0.06980 (13) | 0.0592 (8) | |
| H1A | −0.5408 | 0.2374 | 0.0446 | 0.071* | |
| C2 | −0.3697 (4) | 0.3405 (4) | 0.13821 (12) | 0.0528 (7) | |
| H2 | −0.4781 | 0.3399 | 0.1595 | 0.063* | |
| C3 | −0.1721 (4) | 0.4035 (4) | 0.17649 (11) | 0.0427 (6) | |
| C4 | −0.0155 (4) | 0.4016 (4) | 0.14322 (12) | 0.0515 (7) | |
| H4 | 0.1189 | 0.4429 | 0.1678 | 0.062* | |
| C5 | −0.0572 (4) | 0.3385 (4) | 0.07365 (12) | 0.0558 (7) | |
| H5A | 0.0489 | 0.3375 | 0.0513 | 0.067* | |
| C6 | −0.1345 (4) | 0.4706 (4) | 0.24973 (12) | 0.0436 (6) | |
| C7 | 0.0337 (4) | 0.5784 (4) | 0.35129 (11) | 0.0431 (6) | |
| C8 | 0.2083 (4) | 0.6463 (4) | 0.40831 (11) | 0.0415 (6) | |
| C9 | 0.1803 (4) | 0.7064 (4) | 0.47216 (12) | 0.0496 (7) | |
| H9 | 0.0533 | 0.7076 | 0.4782 | 0.059* | |
| C10 | 0.3421 (4) | 0.7639 (4) | 0.52633 (12) | 0.0520 (7) | |
| H10 | 0.3205 | 0.8000 | 0.5694 | 0.062* | |
| C11 | 0.5555 (4) | 0.7154 (4) | 0.45907 (13) | 0.0551 (7) | |
| H11 | 0.6856 | 0.7205 | 0.4542 | 0.066* | |
| C12 | 0.4001 (4) | 0.6505 (4) | 0.40169 (12) | 0.0490 (7) | |
| H12 | 0.4245 | 0.6105 | 0.3596 | 0.059* | |
| C13 | 0.9602 (4) | 0.9161 (4) | 0.64414 (14) | 0.0521 (7) | |
| C14 | 1.0945 (4) | 0.9948 (4) | 0.71368 (11) | 0.0453 (6) | |
| C15 | 1.0149 (4) | 1.0271 (4) | 0.77116 (12) | 0.0451 (6) | |
| H15 | 0.8738 | 0.9975 | 0.7670 | 0.054* | |
| C16 | 1.1455 (4) | 1.1037 (4) | 0.83507 (11) | 0.0436 (6) | |
| C17 | 1.3553 (4) | 1.1470 (4) | 0.84013 (13) | 0.0533 (7) | |
| H17 | 1.4443 | 1.1995 | 0.8822 | 0.064* | |
| C18 | 1.4324 (4) | 1.1130 (4) | 0.78334 (13) | 0.0577 (8) | |
| H18 | 1.5734 | 1.1419 | 0.7874 | 0.069* | |
| C19 | 1.3043 (4) | 1.0369 (4) | 0.72065 (13) | 0.0542 (7) | |
| H19 | 1.3586 | 1.0134 | 0.6827 | 0.065* | |
| C20 | 1.0666 (4) | 1.1418 (4) | 0.89757 (13) | 0.0509 (7) | |
| N1 | −0.2515 (3) | 0.2788 (3) | 0.03830 (10) | 0.0569 (6) | |
| N2 | −0.2670 (3) | 0.4826 (3) | 0.28576 (10) | 0.0511 (6) | |
| N3 | −0.1552 (3) | 0.5550 (3) | 0.35274 (10) | 0.0529 (6) | |
| N4 | 0.5295 (3) | 0.7709 (3) | 0.52071 (10) | 0.0525 (6) | |
| H1 | 0.7016 | 0.8526 | 0.6043 | 0.079* | |
| O6 | 0.0597 (2) | 0.5275 (2) | 0.28698 (7) | 0.0451 (5) |
| O1 | 0.0608 (14) | 0.0982 (17) | 0.0411 (11) | 0.0313 (12) | −0.0073 (9) | −0.0095 (10) |
| O2 | 0.0854 (16) | 0.128 (2) | 0.0449 (12) | 0.0492 (15) | 0.0062 (11) | −0.0239 (12) |
| O5 | 0.0759 (15) | 0.157 (2) | 0.0339 (12) | 0.0592 (15) | −0.0082 (10) | −0.0223 (12) |
| O3 | 0.0545 (13) | 0.1118 (18) | 0.0450 (12) | 0.0277 (12) | 0.0025 (9) | −0.0144 (11) |
| O4 | 0.0630 (13) | 0.1144 (18) | 0.0341 (11) | 0.0374 (12) | −0.0070 (9) | −0.0135 (11) |
| C1 | 0.0494 (17) | 0.077 (2) | 0.0459 (17) | 0.0259 (15) | −0.0048 (13) | −0.0079 (14) |
| C2 | 0.0514 (17) | 0.0658 (19) | 0.0379 (16) | 0.0239 (14) | 0.0000 (12) | −0.0024 (13) |
| C3 | 0.0490 (16) | 0.0424 (16) | 0.0352 (14) | 0.0190 (12) | 0.0020 (12) | 0.0006 (11) |
| C4 | 0.0498 (17) | 0.0596 (19) | 0.0377 (16) | 0.0182 (14) | −0.0013 (12) | −0.0006 (12) |
| C5 | 0.0523 (18) | 0.075 (2) | 0.0405 (16) | 0.0282 (15) | 0.0051 (13) | 0.0002 (14) |
| C6 | 0.0501 (17) | 0.0421 (16) | 0.0331 (14) | 0.0167 (13) | −0.0027 (12) | 0.0002 (11) |
| C7 | 0.0534 (17) | 0.0443 (16) | 0.0326 (15) | 0.0210 (13) | 0.0079 (12) | 0.0010 (11) |
| C8 | 0.0474 (16) | 0.0436 (16) | 0.0313 (14) | 0.0182 (12) | 0.0019 (11) | 0.0009 (11) |
| C9 | 0.0487 (16) | 0.0590 (18) | 0.0375 (15) | 0.0193 (14) | 0.0060 (12) | −0.0018 (12) |
| C10 | 0.0591 (19) | 0.0614 (19) | 0.0319 (15) | 0.0225 (15) | 0.0052 (13) | −0.0025 (12) |
| C11 | 0.0491 (17) | 0.066 (2) | 0.0508 (18) | 0.0258 (15) | 0.0033 (14) | 0.0032 (14) |
| C12 | 0.0551 (18) | 0.0575 (18) | 0.0338 (15) | 0.0228 (14) | 0.0073 (13) | −0.0006 (12) |
| C13 | 0.0625 (19) | 0.0471 (18) | 0.0468 (18) | 0.0236 (14) | 0.0068 (14) | 0.0024 (13) |
| C14 | 0.0574 (17) | 0.0467 (17) | 0.0315 (14) | 0.0233 (13) | 0.0020 (12) | −0.0004 (11) |
| C15 | 0.0472 (15) | 0.0468 (16) | 0.0417 (15) | 0.0221 (13) | 0.0003 (12) | 0.0039 (12) |
| C16 | 0.0492 (16) | 0.0482 (16) | 0.0329 (14) | 0.0220 (13) | −0.0005 (12) | 0.0029 (11) |
| C17 | 0.0537 (18) | 0.0604 (19) | 0.0428 (16) | 0.0251 (15) | −0.0042 (13) | −0.0001 (13) |
| C18 | 0.0508 (17) | 0.073 (2) | 0.0485 (18) | 0.0270 (16) | 0.0037 (14) | 0.0004 (15) |
| C19 | 0.0609 (19) | 0.0605 (19) | 0.0458 (17) | 0.0285 (15) | 0.0126 (14) | 0.0029 (13) |
| C20 | 0.0509 (18) | 0.0600 (19) | 0.0408 (16) | 0.0251 (14) | −0.0007 (13) | 0.0014 (13) |
| N1 | 0.0585 (16) | 0.0779 (18) | 0.0301 (13) | 0.0295 (13) | −0.0054 (11) | −0.0088 (11) |
| N2 | 0.0505 (14) | 0.0635 (16) | 0.0366 (13) | 0.0230 (12) | 0.0021 (10) | −0.0024 (10) |
| N3 | 0.0525 (15) | 0.0684 (16) | 0.0351 (13) | 0.0244 (12) | 0.0016 (10) | −0.0013 (10) |
| N4 | 0.0582 (15) | 0.0540 (15) | 0.0382 (13) | 0.0189 (12) | −0.0012 (11) | 0.0011 (10) |
| O6 | 0.0486 (11) | 0.0548 (11) | 0.0293 (9) | 0.0211 (9) | 0.0009 (8) | −0.0035 (7) |
| O1—C13 | 1.306 (3) | C8—C12 | 1.377 (3) |
| O1—H1 | 0.8221 | C8—C9 | 1.382 (3) |
| O2—C13 | 1.195 (3) | C9—C10 | 1.366 (3) |
| O5—N1 | 1.303 (2) | C9—H9 | 0.9300 |
| O3—C20 | 1.312 (3) | C10—N4 | 1.333 (3) |
| O3—H3 | 0.8200 | C10—H10 | 0.9300 |
| O4—C20 | 1.205 (3) | C11—N4 | 1.326 (3) |
| C1—N1 | 1.347 (3) | C11—C12 | 1.380 (3) |
| C1—C2 | 1.358 (3) | C11—H11 | 0.9300 |
| C1—H1A | 0.9300 | C12—H12 | 0.9300 |
| C2—C3 | 1.381 (3) | C13—C14 | 1.497 (3) |
| C2—H2 | 0.9300 | C14—C19 | 1.384 (3) |
| C3—C4 | 1.378 (3) | C14—C15 | 1.391 (3) |
| C3—C6 | 1.457 (3) | C15—C16 | 1.398 (3) |
| C4—C5 | 1.380 (3) | C15—H15 | 0.9300 |
| C4—H4 | 0.9300 | C16—C17 | 1.385 (3) |
| C5—N1 | 1.343 (3) | C16—C20 | 1.487 (3) |
| C5—H5A | 0.9300 | C17—C18 | 1.372 (3) |
| C6—N2 | 1.287 (3) | C17—H17 | 0.9300 |
| C6—O6 | 1.358 (3) | C18—C19 | 1.372 (3) |
| C7—N3 | 1.290 (3) | C18—H18 | 0.9300 |
| C7—O6 | 1.366 (3) | C19—H19 | 0.9300 |
| C7—C8 | 1.454 (3) | N2—N3 | 1.400 (3) |
| C13—O1—H1 | 109.3 | C8—C12—C11 | 118.4 (2) |
| C20—O3—H3 | 109.5 | C8—C12—H12 | 120.8 |
| N1—C1—C2 | 120.3 (2) | C11—C12—H12 | 120.8 |
| N1—C1—H1A | 119.8 | O2—C13—O1 | 124.3 (3) |
| C2—C1—H1A | 119.8 | O2—C13—C14 | 122.8 (3) |
| C1—C2—C3 | 120.7 (2) | O1—C13—C14 | 112.8 (2) |
| C1—C2—H2 | 119.7 | C19—C14—C15 | 119.2 (2) |
| C3—C2—H2 | 119.7 | C19—C14—C13 | 118.7 (2) |
| C4—C3—C2 | 118.0 (2) | C15—C14—C13 | 122.0 (2) |
| C4—C3—C6 | 122.1 (2) | C14—C15—C16 | 120.4 (2) |
| C2—C3—C6 | 119.9 (2) | C14—C15—H15 | 119.8 |
| C3—C4—C5 | 120.3 (2) | C16—C15—H15 | 119.8 |
| C3—C4—H4 | 119.8 | C17—C16—C15 | 118.9 (2) |
| C5—C4—H4 | 119.8 | C17—C16—C20 | 119.1 (2) |
| N1—C5—C4 | 119.7 (2) | C15—C16—C20 | 122.0 (2) |
| N1—C5—H5A | 120.1 | C18—C17—C16 | 120.3 (2) |
| C4—C5—H5A | 120.1 | C18—C17—H17 | 119.8 |
| N2—C6—O6 | 113.3 (2) | C16—C17—H17 | 119.8 |
| N2—C6—C3 | 127.5 (2) | C19—C18—C17 | 120.8 (3) |
| O6—C6—C3 | 119.1 (2) | C19—C18—H18 | 119.6 |
| N3—C7—O6 | 112.1 (2) | C17—C18—H18 | 119.6 |
| N3—C7—C8 | 127.9 (2) | C18—C19—C14 | 120.2 (2) |
| O6—C7—C8 | 120.0 (2) | C18—C19—H19 | 119.9 |
| C12—C8—C9 | 118.4 (2) | C14—C19—H19 | 119.9 |
| C12—C8—C7 | 122.7 (2) | O4—C20—O3 | 123.4 (2) |
| C9—C8—C7 | 118.8 (2) | O4—C20—C16 | 123.4 (2) |
| C10—C9—C8 | 119.0 (2) | O3—C20—C16 | 113.2 (2) |
| C10—C9—H9 | 120.5 | O5—N1—C5 | 120.9 (2) |
| C8—C9—H9 | 120.5 | O5—N1—C1 | 118.2 (2) |
| N4—C10—C9 | 123.4 (2) | C5—N1—C1 | 120.9 (2) |
| N4—C10—H10 | 118.3 | C6—N2—N3 | 105.6 (2) |
| C9—C10—H10 | 118.3 | C7—N3—N2 | 106.81 (19) |
| N4—C11—C12 | 123.7 (2) | C11—N4—C10 | 117.1 (2) |
| N4—C11—H11 | 118.2 | C6—O6—C7 | 102.14 (18) |
| C12—C11—H11 | 118.2 | ||
| N1—C1—C2—C3 | 0.2 (4) | C14—C15—C16—C20 | 179.5 (2) |
| C1—C2—C3—C4 | −0.2 (4) | C15—C16—C17—C18 | −0.7 (4) |
| C1—C2—C3—C6 | 179.4 (2) | C20—C16—C17—C18 | 179.9 (2) |
| C2—C3—C4—C5 | 0.1 (4) | C16—C17—C18—C19 | 0.4 (4) |
| C6—C3—C4—C5 | −179.5 (2) | C17—C18—C19—C14 | 0.6 (4) |
| C3—C4—C5—N1 | 0.0 (4) | C15—C14—C19—C18 | −1.2 (4) |
| C4—C3—C6—N2 | 178.5 (3) | C13—C14—C19—C18 | 178.7 (2) |
| C2—C3—C6—N2 | −1.1 (4) | C17—C16—C20—O4 | 3.7 (4) |
| C4—C3—C6—O6 | −2.0 (4) | C15—C16—C20—O4 | −175.7 (3) |
| C2—C3—C6—O6 | 178.4 (2) | C17—C16—C20—O3 | −176.5 (2) |
| N3—C7—C8—C12 | 174.8 (2) | C15—C16—C20—O3 | 4.1 (4) |
| O6—C7—C8—C12 | −4.2 (4) | C4—C5—N1—O5 | 178.7 (2) |
| N3—C7—C8—C9 | −4.2 (4) | C4—C5—N1—C1 | 0.0 (4) |
| O6—C7—C8—C9 | 176.9 (2) | C2—C1—N1—O5 | −178.8 (2) |
| C12—C8—C9—C10 | −1.1 (4) | C2—C1—N1—C5 | 0.0 (4) |
| C7—C8—C9—C10 | 177.9 (2) | O6—C6—N2—N3 | 0.5 (3) |
| C8—C9—C10—N4 | 2.0 (4) | C3—C6—N2—N3 | −179.9 (2) |
| C9—C8—C12—C11 | −0.3 (4) | O6—C7—N3—N2 | 0.4 (3) |
| C7—C8—C12—C11 | −179.3 (2) | C8—C7—N3—N2 | −178.6 (2) |
| N4—C11—C12—C8 | 1.2 (4) | C6—N2—N3—C7 | −0.5 (3) |
| O2—C13—C14—C19 | 6.8 (4) | C12—C11—N4—C10 | −0.5 (4) |
| O1—C13—C14—C19 | −173.4 (2) | C9—C10—N4—C11 | −1.1 (4) |
| O2—C13—C14—C15 | −173.3 (3) | N2—C6—O6—C7 | −0.3 (3) |
| O1—C13—C14—C15 | 6.5 (4) | C3—C6—O6—C7 | −179.9 (2) |
| C19—C14—C15—C16 | 0.9 (4) | N3—C7—O6—C6 | 0.0 (3) |
| C13—C14—C15—C16 | −179.0 (2) | C8—C7—O6—C6 | 179.0 (2) |
| C14—C15—C16—C17 | 0.1 (4) |
| H··· | ||||
| O1—H1···N4 | 0.82 | 1.82 | 2.640 (2) | 171 |
| O3—H3···O5i | 0.82 | 1.72 | 2.521 (3) | 163 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯N4 | 0.82 | 1.82 | 2.640 (2) | 171 |
| O3—H3⋯O5i | 0.82 | 1.72 | 2.521 (3) | 163 |
Symmetry code: (i) .