| Literature DB >> 23476215 |
Paola Castro-Montes1, Jorge A Guerrero-Alvarez, Herbert Hopfl, Jose J Campos-Gaxiola, Adriana Cruz-Enriquez.
Abstract
The title 2:1 co-crystal, 2C12H10N2·C8H6O4, crystallizes with one mol-ecule of 4-[(E)-2-(pyridin-2-yl)ethen-yl]pyridine (A) and one half-mol-ecule of terephthalic acid (B) in the asymmetric unit. In the crystal, the components are linked through heterodimeric COOH⋯Npyridine synthons, forming linear aggregates of composition -A-B-A-B-. Further linkage through weak C-H⋯O and C-H⋯π inter-actions gives two-dimensional hydrogen-bonded undulating sheets propagating in the [100] and [010] directions. These layers are connected through additional weak C-H⋯O contacts, forming a three-dimensional structure.Entities:
Year: 2012 PMID: 23476215 PMCID: PMC3588979 DOI: 10.1107/S1600536812046284
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H10N2·0.5C8H6O4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 4971 reflections |
| θ = 2.5–27.1° | |
| µ = 0.09 mm−1 | |
| β = 111.440 (2)° | Block, colourless |
| 0.48 × 0.41 × 0.34 mm | |
| Bruker SMART CCD area-detector diffractometer | 2328 independent reflections |
| Radiation source: fine-focus sealed tube | 2119 reflections with |
| Graphite monochromator | |
| phi and ω scans | θmax = 25.0°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 12715 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2328 reflections | (Δ/σ)max < 0.001 |
| 184 parameters | Δρmax = 0.14 e Å−3 |
| 1 restraint | Δρmin = −0.20 e Å−3 |
| Experimental. Spectroscopic and TGA data for the title
compound: IR (KBr): 3056, 2944, 1706, 1683, 1606, 1581, 1504, 1425, 1290 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.7604 (3) | 0.03567 (5) | 0.8732 (2) | 0.0626 (4) | |
| H1' | 0.752 (4) | 0.0508 (7) | 0.969 (3) | 0.094* | |
| O2 | 1.0571 (2) | 0.07552 (4) | 0.9137 (2) | 0.0646 (4) | |
| C1 | 0.9678 (3) | 0.02216 (5) | 0.6602 (3) | 0.0419 (4) | |
| C2 | 0.8138 (3) | −0.00755 (6) | 0.5490 (3) | 0.0497 (5) | |
| H2 | 0.6876 | −0.0128 | 0.5824 | 0.060* | |
| C3 | 1.1549 (3) | 0.02934 (6) | 0.6094 (3) | 0.0502 (5) | |
| H3 | 1.2603 | 0.0491 | 0.6830 | 0.060* | |
| C4 | 0.9339 (3) | 0.04711 (6) | 0.8289 (3) | 0.0478 (5) | |
| N1 | 0.7178 (3) | 0.08162 (5) | 0.1678 (2) | 0.0525 (4) | |
| N2 | 0.6102 (3) | 0.20912 (5) | 0.9682 (3) | 0.0577 (5) | |
| C5 | 0.5534 (3) | 0.07399 (6) | 0.2373 (3) | 0.0525 (5) | |
| H5 | 0.4559 | 0.0521 | 0.1784 | 0.063* | |
| C6 | 0.5203 (3) | 0.09677 (6) | 0.3915 (3) | 0.0515 (5) | |
| H6 | 0.4020 | 0.0903 | 0.4346 | 0.062* | |
| C7 | 0.6625 (3) | 0.12946 (6) | 0.4837 (3) | 0.0471 (5) | |
| C8 | 0.8332 (3) | 0.13732 (7) | 0.4096 (3) | 0.0567 (5) | |
| H8 | 0.9330 | 0.1590 | 0.4651 | 0.068* | |
| C9 | 0.8553 (4) | 0.11300 (7) | 0.2539 (3) | 0.0580 (5) | |
| H9 | 0.9714 | 0.1188 | 0.2067 | 0.070* | |
| C10 | 0.6360 (3) | 0.15554 (6) | 0.6476 (3) | 0.0519 (5) | |
| H10 | 0.7328 | 0.1781 | 0.6911 | 0.062* | |
| C11 | 0.4900 (3) | 0.15052 (6) | 0.7397 (3) | 0.0509 (5) | |
| H11 | 0.3948 | 0.1277 | 0.6996 | 0.061* | |
| C12 | 0.4641 (3) | 0.17767 (5) | 0.8998 (3) | 0.0472 (5) | |
| C13 | 0.2917 (3) | 0.17128 (6) | 0.9726 (3) | 0.0545 (5) | |
| H13 | 0.1941 | 0.1490 | 0.9238 | 0.065* | |
| C14 | 0.2652 (4) | 0.19789 (7) | 1.1171 (3) | 0.0628 (6) | |
| H14 | 0.1481 | 0.1942 | 1.1654 | 0.075* | |
| C15 | 0.4136 (4) | 0.22994 (7) | 1.1891 (3) | 0.0656 (6) | |
| H15 | 0.4008 | 0.2484 | 1.2880 | 0.079* | |
| C16 | 0.5813 (4) | 0.23397 (7) | 1.1110 (4) | 0.0682 (6) | |
| H16 | 0.6827 | 0.2557 | 1.1613 | 0.082* |
| O1 | 0.0692 (9) | 0.0688 (10) | 0.0642 (9) | −0.0138 (7) | 0.0414 (8) | −0.0204 (7) |
| O2 | 0.0679 (9) | 0.0625 (9) | 0.0677 (9) | −0.0156 (7) | 0.0300 (8) | −0.0246 (7) |
| C1 | 0.0449 (10) | 0.0379 (9) | 0.0434 (10) | 0.0019 (7) | 0.0166 (8) | 0.0039 (7) |
| C2 | 0.0455 (10) | 0.0521 (11) | 0.0588 (11) | −0.0072 (8) | 0.0276 (9) | −0.0060 (9) |
| C3 | 0.0508 (11) | 0.0474 (10) | 0.0553 (11) | −0.0111 (8) | 0.0228 (9) | −0.0094 (8) |
| C4 | 0.0498 (10) | 0.0485 (11) | 0.0452 (10) | 0.0027 (8) | 0.0174 (8) | 0.0011 (8) |
| N1 | 0.0618 (10) | 0.0534 (9) | 0.0457 (9) | 0.0075 (8) | 0.0237 (8) | 0.0007 (7) |
| N2 | 0.0646 (11) | 0.0492 (9) | 0.0602 (10) | −0.0050 (8) | 0.0238 (8) | −0.0120 (8) |
| C5 | 0.0594 (12) | 0.0499 (11) | 0.0494 (11) | −0.0002 (9) | 0.0215 (9) | −0.0047 (8) |
| C6 | 0.0560 (11) | 0.0508 (11) | 0.0521 (11) | −0.0006 (9) | 0.0250 (9) | −0.0039 (8) |
| C7 | 0.0525 (11) | 0.0440 (10) | 0.0443 (10) | 0.0072 (8) | 0.0170 (8) | 0.0036 (8) |
| C8 | 0.0592 (12) | 0.0568 (12) | 0.0559 (11) | −0.0050 (9) | 0.0232 (10) | −0.0035 (9) |
| C9 | 0.0620 (12) | 0.0632 (13) | 0.0576 (12) | 0.0011 (10) | 0.0323 (10) | 0.0025 (10) |
| C10 | 0.0596 (11) | 0.0439 (10) | 0.0522 (11) | −0.0025 (8) | 0.0205 (9) | −0.0047 (8) |
| C11 | 0.0594 (11) | 0.0433 (10) | 0.0499 (11) | −0.0015 (9) | 0.0199 (9) | −0.0059 (8) |
| C12 | 0.0555 (11) | 0.0399 (10) | 0.0439 (10) | 0.0051 (8) | 0.0154 (8) | 0.0020 (7) |
| C13 | 0.0643 (12) | 0.0461 (11) | 0.0548 (11) | 0.0005 (9) | 0.0239 (10) | 0.0014 (8) |
| C14 | 0.0770 (14) | 0.0600 (13) | 0.0610 (12) | 0.0113 (11) | 0.0367 (11) | 0.0038 (10) |
| C15 | 0.0885 (16) | 0.0541 (12) | 0.0562 (12) | 0.0142 (11) | 0.0288 (11) | −0.0072 (10) |
| C16 | 0.0810 (15) | 0.0527 (12) | 0.0669 (13) | −0.0062 (11) | 0.0224 (12) | −0.0188 (10) |
| O1—C4 | 1.305 (2) | C7—C8 | 1.384 (3) |
| O1—H1' | 0.8401 (10) | C7—C10 | 1.465 (3) |
| O2—C4 | 1.210 (2) | C8—C9 | 1.376 (3) |
| C1—C3 | 1.381 (2) | C8—H8 | 0.9300 |
| C1—C2 | 1.386 (3) | C9—H9 | 0.9300 |
| C1—C4 | 1.491 (3) | C10—C11 | 1.314 (3) |
| C2—C3i | 1.371 (3) | C10—H10 | 0.9300 |
| C2—H2 | 0.9300 | C11—C12 | 1.463 (3) |
| C3—C2i | 1.371 (3) | C11—H11 | 0.9300 |
| C3—H3 | 0.9300 | C12—C13 | 1.380 (3) |
| N1—C5 | 1.325 (2) | C13—C14 | 1.369 (3) |
| N1—C9 | 1.330 (3) | C13—H13 | 0.9300 |
| N2—C16 | 1.332 (3) | C14—C15 | 1.368 (3) |
| N2—C12 | 1.342 (2) | C14—H14 | 0.9300 |
| C5—C6 | 1.369 (3) | C15—C16 | 1.368 (3) |
| C5—H5 | 0.9300 | C15—H15 | 0.9300 |
| C6—C7 | 1.386 (3) | C16—H16 | 0.9300 |
| C6—H6 | 0.9300 | ||
| C4—O1—H1' | 108.9 (19) | C7—C8—H8 | 120.0 |
| C3—C1—C2 | 118.76 (17) | N1—C9—C8 | 122.86 (19) |
| C3—C1—C4 | 119.37 (16) | N1—C9—H9 | 118.6 |
| C2—C1—C4 | 121.86 (16) | C8—C9—H9 | 118.6 |
| C3i—C2—C1 | 120.91 (17) | C11—C10—C7 | 126.94 (18) |
| C3i—C2—H2 | 119.5 | C11—C10—H10 | 116.5 |
| C1—C2—H2 | 119.5 | C7—C10—H10 | 116.5 |
| C2i—C3—C1 | 120.33 (17) | C10—C11—C12 | 125.68 (18) |
| C2i—C3—H3 | 119.8 | C10—C11—H11 | 117.2 |
| C1—C3—H3 | 119.8 | C12—C11—H11 | 117.2 |
| O2—C4—O1 | 124.02 (17) | N2—C12—C13 | 122.00 (17) |
| O2—C4—C1 | 122.08 (17) | N2—C12—C11 | 117.51 (17) |
| O1—C4—C1 | 113.89 (16) | C13—C12—C11 | 120.47 (17) |
| C5—N1—C9 | 117.55 (16) | C14—C13—C12 | 119.7 (2) |
| C16—N2—C12 | 116.65 (18) | C14—C13—H13 | 120.2 |
| N1—C5—C6 | 123.07 (18) | C12—C13—H13 | 120.2 |
| N1—C5—H5 | 118.5 | C15—C14—C13 | 119.0 (2) |
| C6—C5—H5 | 118.5 | C15—C14—H14 | 120.5 |
| C5—C6—C7 | 120.20 (18) | C13—C14—H14 | 120.5 |
| C5—C6—H6 | 119.9 | C14—C15—C16 | 117.86 (19) |
| C7—C6—H6 | 119.9 | C14—C15—H15 | 121.1 |
| C8—C7—C6 | 116.35 (17) | C16—C15—H15 | 121.1 |
| C8—C7—C10 | 120.33 (18) | N2—C16—C15 | 124.8 (2) |
| C6—C7—C10 | 123.31 (17) | N2—C16—H16 | 117.6 |
| C9—C8—C7 | 119.96 (19) | C15—C16—H16 | 117.6 |
| C9—C8—H8 | 120.0 | ||
| C3—C1—C2—C3i | −0.4 (3) | C7—C8—C9—N1 | 0.2 (3) |
| C4—C1—C2—C3i | 178.17 (17) | C8—C7—C10—C11 | −176.30 (19) |
| C2—C1—C3—C2i | 0.4 (3) | C6—C7—C10—C11 | 5.1 (3) |
| C4—C1—C3—C2i | −178.21 (17) | C7—C10—C11—C12 | −178.50 (17) |
| C3—C1—C4—O2 | 5.2 (3) | C16—N2—C12—C13 | 0.2 (3) |
| C2—C1—C4—O2 | −173.37 (18) | C16—N2—C12—C11 | 178.75 (18) |
| C3—C1—C4—O1 | −175.43 (17) | C10—C11—C12—N2 | −4.2 (3) |
| C2—C1—C4—O1 | 6.0 (3) | C10—C11—C12—C13 | 174.40 (19) |
| C9—N1—C5—C6 | 0.0 (3) | N2—C12—C13—C14 | 0.8 (3) |
| N1—C5—C6—C7 | −0.3 (3) | C11—C12—C13—C14 | −177.69 (18) |
| C5—C6—C7—C8 | 0.5 (3) | C12—C13—C14—C15 | −1.2 (3) |
| C5—C6—C7—C10 | 179.21 (18) | C13—C14—C15—C16 | 0.5 (3) |
| C6—C7—C8—C9 | −0.5 (3) | C12—N2—C16—C15 | −0.9 (3) |
| C10—C7—C8—C9 | −179.21 (18) | C14—C15—C16—N2 | 0.6 (4) |
| C5—N1—C9—C8 | 0.1 (3) |
| H··· | ||||
| O1—H1′···N1ii | 0.84 | 1.77 | 2.604 (2) | 177 |
| C9—H9···O2iii | 0.93 | 2.67 | 3.285 (3) | 125 |
| C13—H13···O2iv | 0.93 | 2.52 | 3.396 (2) | 157 |
| C5—H5···O2v | 0.93 | 2.64 | 3.135 (2) | 114 |
| C16—H16··· | 0.93 | 2.86 | 3.627 (3) | 141 |
Hydrogen-bond geometry (Å, °)
Cg is the centroid of the N2/C12–C16 pyridine ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1′⋯N1i | 0.84 | 1.77 | 2.604 (2) | 177 |
| C9—H9⋯O2ii | 0.93 | 2.67 | 3.285 (3) | 125 |
| C13—H13⋯O2iii | 0.93 | 2.52 | 3.396 (2) | 157 |
| C5—H5⋯O2iv | 0.93 | 2.64 | 3.135 (2) | 114 |
| C16—H16⋯ | 0.93 | 2.86 | 3.627 (3) | 141 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .