Literature DB >> 23476215

4-[(E)-2-(Pyridin-2-yl)ethen-yl]pyridine-terephthalic acid (2/1).

Paola Castro-Montes1, Jorge A Guerrero-Alvarez, Herbert Hopfl, Jose J Campos-Gaxiola, Adriana Cruz-Enriquez.   

Abstract

The title 2:1 co-crystal, 2C12H10N2·C8H6O4, crystallizes with one mol-ecule of 4-[(E)-2-(pyridin-2-yl)ethen-yl]pyridine (A) and one half-mol-ecule of terephthalic acid (B) in the asymmetric unit. In the crystal, the components are linked through heterodimeric COOHNpyridine synthons, forming linear aggregates of composition -A-B-A-B-. Further linkage through weak C-H⋯O and C-H⋯π inter-actions gives two-dimensional hydrogen-bonded undulating sheets propagating in the [100] and [010] directions. These layers are connected through additional weak C-H⋯O contacts, forming a three-dimensional structure.

Entities:  

Year:  2012        PMID: 23476215      PMCID: PMC3588979          DOI: 10.1107/S1600536812046284

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For reports on supra­molecular crystal engineering and potential applications of co-crystals, see: Desiraju (1995 ▶); Simon & Bassoul (2000 ▶); Bhogala & Nangia (2003 ▶); Weyna et al. (2009 ▶); Yan et al. (2012 ▶). For background to related co-crystals, see: Santra et al. (2008 ▶); Moon & Park (2012 ▶); Ebenezer & Muthiah (2012 ▶).

Experimental

Crystal data

C12H10N2·0.5C8H6O4 M = 265.28 Monoclinic, a = 6.3821 (8) Å b = 32.301 (4) Å c = 6.8721 (8) Å β = 111.440 (2)° V = 1318.6 (3) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.48 × 0.41 × 0.34 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.96, T max = 0.97 12715 measured reflections 2328 independent reflections 2119 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.149 S = 1.17 2328 reflections 184 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.14 e Å−3 Δρmin = −0.20 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT-Plus (Bruker 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 2012 ▶) and Mercury (Macrae et al. 2008 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812046284/su2525sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812046284/su2525Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812046284/su2525Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H10N2·0.5C8H6O4F(000) = 556
Mr = 265.28Dx = 1.336 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 4971 reflections
a = 6.3821 (8) Åθ = 2.5–27.1°
b = 32.301 (4) ŵ = 0.09 mm1
c = 6.8721 (8) ÅT = 293 K
β = 111.440 (2)°Block, colourless
V = 1318.6 (3) Å30.48 × 0.41 × 0.34 mm
Z = 4
Bruker SMART CCD area-detector diffractometer2328 independent reflections
Radiation source: fine-focus sealed tube2119 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.033
phi and ω scansθmax = 25.0°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −7→7
Tmin = 0.96, Tmax = 0.97k = −38→38
12715 measured reflectionsl = −8→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.055Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.149H atoms treated by a mixture of independent and constrained refinement
S = 1.17w = 1/[σ2(Fo2) + (0.0769P)2 + 0.2452P] where P = (Fo2 + 2Fc2)/3
2328 reflections(Δ/σ)max < 0.001
184 parametersΔρmax = 0.14 e Å3
1 restraintΔρmin = −0.20 e Å3
Experimental. Spectroscopic and TGA data for the title compound: IR (KBr): 3056, 2944, 1706, 1683, 1606, 1581, 1504, 1425, 1290 y 731 cm-1. 1H-RMN (200 MHz, DMSO-d6, TMS): δ 8.59 (m, 3H), 8.04 (s, 4H), 7.83 (td, J = 0.8, 4 Hz, 1H), 7.61 (m, 5H), 7.32 (m, 1H). TGA Calcd. for 2 C12H10N2: 68.69. Found: 69.27% (303 - 533 K).
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.7604 (3)0.03567 (5)0.8732 (2)0.0626 (4)
H1'0.752 (4)0.0508 (7)0.969 (3)0.094*
O21.0571 (2)0.07552 (4)0.9137 (2)0.0646 (4)
C10.9678 (3)0.02216 (5)0.6602 (3)0.0419 (4)
C20.8138 (3)−0.00755 (6)0.5490 (3)0.0497 (5)
H20.6876−0.01280.58240.060*
C31.1549 (3)0.02934 (6)0.6094 (3)0.0502 (5)
H31.26030.04910.68300.060*
C40.9339 (3)0.04711 (6)0.8289 (3)0.0478 (5)
N10.7178 (3)0.08162 (5)0.1678 (2)0.0525 (4)
N20.6102 (3)0.20912 (5)0.9682 (3)0.0577 (5)
C50.5534 (3)0.07399 (6)0.2373 (3)0.0525 (5)
H50.45590.05210.17840.063*
C60.5203 (3)0.09677 (6)0.3915 (3)0.0515 (5)
H60.40200.09030.43460.062*
C70.6625 (3)0.12946 (6)0.4837 (3)0.0471 (5)
C80.8332 (3)0.13732 (7)0.4096 (3)0.0567 (5)
H80.93300.15900.46510.068*
C90.8553 (4)0.11300 (7)0.2539 (3)0.0580 (5)
H90.97140.11880.20670.070*
C100.6360 (3)0.15554 (6)0.6476 (3)0.0519 (5)
H100.73280.17810.69110.062*
C110.4900 (3)0.15052 (6)0.7397 (3)0.0509 (5)
H110.39480.12770.69960.061*
C120.4641 (3)0.17767 (5)0.8998 (3)0.0472 (5)
C130.2917 (3)0.17128 (6)0.9726 (3)0.0545 (5)
H130.19410.14900.92380.065*
C140.2652 (4)0.19789 (7)1.1171 (3)0.0628 (6)
H140.14810.19421.16540.075*
C150.4136 (4)0.22994 (7)1.1891 (3)0.0656 (6)
H150.40080.24841.28800.079*
C160.5813 (4)0.23397 (7)1.1110 (4)0.0682 (6)
H160.68270.25571.16130.082*
U11U22U33U12U13U23
O10.0692 (9)0.0688 (10)0.0642 (9)−0.0138 (7)0.0414 (8)−0.0204 (7)
O20.0679 (9)0.0625 (9)0.0677 (9)−0.0156 (7)0.0300 (8)−0.0246 (7)
C10.0449 (10)0.0379 (9)0.0434 (10)0.0019 (7)0.0166 (8)0.0039 (7)
C20.0455 (10)0.0521 (11)0.0588 (11)−0.0072 (8)0.0276 (9)−0.0060 (9)
C30.0508 (11)0.0474 (10)0.0553 (11)−0.0111 (8)0.0228 (9)−0.0094 (8)
C40.0498 (10)0.0485 (11)0.0452 (10)0.0027 (8)0.0174 (8)0.0011 (8)
N10.0618 (10)0.0534 (9)0.0457 (9)0.0075 (8)0.0237 (8)0.0007 (7)
N20.0646 (11)0.0492 (9)0.0602 (10)−0.0050 (8)0.0238 (8)−0.0120 (8)
C50.0594 (12)0.0499 (11)0.0494 (11)−0.0002 (9)0.0215 (9)−0.0047 (8)
C60.0560 (11)0.0508 (11)0.0521 (11)−0.0006 (9)0.0250 (9)−0.0039 (8)
C70.0525 (11)0.0440 (10)0.0443 (10)0.0072 (8)0.0170 (8)0.0036 (8)
C80.0592 (12)0.0568 (12)0.0559 (11)−0.0050 (9)0.0232 (10)−0.0035 (9)
C90.0620 (12)0.0632 (13)0.0576 (12)0.0011 (10)0.0323 (10)0.0025 (10)
C100.0596 (11)0.0439 (10)0.0522 (11)−0.0025 (8)0.0205 (9)−0.0047 (8)
C110.0594 (11)0.0433 (10)0.0499 (11)−0.0015 (9)0.0199 (9)−0.0059 (8)
C120.0555 (11)0.0399 (10)0.0439 (10)0.0051 (8)0.0154 (8)0.0020 (7)
C130.0643 (12)0.0461 (11)0.0548 (11)0.0005 (9)0.0239 (10)0.0014 (8)
C140.0770 (14)0.0600 (13)0.0610 (12)0.0113 (11)0.0367 (11)0.0038 (10)
C150.0885 (16)0.0541 (12)0.0562 (12)0.0142 (11)0.0288 (11)−0.0072 (10)
C160.0810 (15)0.0527 (12)0.0669 (13)−0.0062 (11)0.0224 (12)−0.0188 (10)
O1—C41.305 (2)C7—C81.384 (3)
O1—H1'0.8401 (10)C7—C101.465 (3)
O2—C41.210 (2)C8—C91.376 (3)
C1—C31.381 (2)C8—H80.9300
C1—C21.386 (3)C9—H90.9300
C1—C41.491 (3)C10—C111.314 (3)
C2—C3i1.371 (3)C10—H100.9300
C2—H20.9300C11—C121.463 (3)
C3—C2i1.371 (3)C11—H110.9300
C3—H30.9300C12—C131.380 (3)
N1—C51.325 (2)C13—C141.369 (3)
N1—C91.330 (3)C13—H130.9300
N2—C161.332 (3)C14—C151.368 (3)
N2—C121.342 (2)C14—H140.9300
C5—C61.369 (3)C15—C161.368 (3)
C5—H50.9300C15—H150.9300
C6—C71.386 (3)C16—H160.9300
C6—H60.9300
C4—O1—H1'108.9 (19)C7—C8—H8120.0
C3—C1—C2118.76 (17)N1—C9—C8122.86 (19)
C3—C1—C4119.37 (16)N1—C9—H9118.6
C2—C1—C4121.86 (16)C8—C9—H9118.6
C3i—C2—C1120.91 (17)C11—C10—C7126.94 (18)
C3i—C2—H2119.5C11—C10—H10116.5
C1—C2—H2119.5C7—C10—H10116.5
C2i—C3—C1120.33 (17)C10—C11—C12125.68 (18)
C2i—C3—H3119.8C10—C11—H11117.2
C1—C3—H3119.8C12—C11—H11117.2
O2—C4—O1124.02 (17)N2—C12—C13122.00 (17)
O2—C4—C1122.08 (17)N2—C12—C11117.51 (17)
O1—C4—C1113.89 (16)C13—C12—C11120.47 (17)
C5—N1—C9117.55 (16)C14—C13—C12119.7 (2)
C16—N2—C12116.65 (18)C14—C13—H13120.2
N1—C5—C6123.07 (18)C12—C13—H13120.2
N1—C5—H5118.5C15—C14—C13119.0 (2)
C6—C5—H5118.5C15—C14—H14120.5
C5—C6—C7120.20 (18)C13—C14—H14120.5
C5—C6—H6119.9C14—C15—C16117.86 (19)
C7—C6—H6119.9C14—C15—H15121.1
C8—C7—C6116.35 (17)C16—C15—H15121.1
C8—C7—C10120.33 (18)N2—C16—C15124.8 (2)
C6—C7—C10123.31 (17)N2—C16—H16117.6
C9—C8—C7119.96 (19)C15—C16—H16117.6
C9—C8—H8120.0
C3—C1—C2—C3i−0.4 (3)C7—C8—C9—N10.2 (3)
C4—C1—C2—C3i178.17 (17)C8—C7—C10—C11−176.30 (19)
C2—C1—C3—C2i0.4 (3)C6—C7—C10—C115.1 (3)
C4—C1—C3—C2i−178.21 (17)C7—C10—C11—C12−178.50 (17)
C3—C1—C4—O25.2 (3)C16—N2—C12—C130.2 (3)
C2—C1—C4—O2−173.37 (18)C16—N2—C12—C11178.75 (18)
C3—C1—C4—O1−175.43 (17)C10—C11—C12—N2−4.2 (3)
C2—C1—C4—O16.0 (3)C10—C11—C12—C13174.40 (19)
C9—N1—C5—C60.0 (3)N2—C12—C13—C140.8 (3)
N1—C5—C6—C7−0.3 (3)C11—C12—C13—C14−177.69 (18)
C5—C6—C7—C80.5 (3)C12—C13—C14—C15−1.2 (3)
C5—C6—C7—C10179.21 (18)C13—C14—C15—C160.5 (3)
C6—C7—C8—C9−0.5 (3)C12—N2—C16—C15−0.9 (3)
C10—C7—C8—C9−179.21 (18)C14—C15—C16—N20.6 (4)
C5—N1—C9—C80.1 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1′···N1ii0.841.772.604 (2)177
C9—H9···O2iii0.932.673.285 (3)125
C13—H13···O2iv0.932.523.396 (2)157
C5—H5···O2v0.932.643.135 (2)114
C16—H16···Cgvi0.932.863.627 (3)141
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the N2/C12–C16 pyridine ring.

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1′⋯N1i 0.841.772.604 (2)177
C9—H9⋯O2ii 0.932.673.285 (3)125
C13—H13⋯O2iii 0.932.523.396 (2)157
C5—H5⋯O2iv 0.932.643.135 (2)114
C16—H16⋯Cg v 0.932.863.627 (3)141

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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