| Literature DB >> 22590400 |
M Sukeri M Yusof, Nur Farhana Embong, Bohari M Yamin, Nurziana Ngah.
Abstract
The asymmetric unit of the title compound, C(11)H(12)Cl(2)N(2)OS, contains two crystallographically independent mol-ecules with different conformations: the benzene ring and the thio-urea fragment form dihedral angles of 74.32 (11) and 89.39 (11)°. One amino group in each mol-ecule is involved in intra-molecular N-H⋯O and inter-molecular N-H⋯O hydrogen bonding: the latter links pairs of independent mol-ecules into dimers. In the crystal, weak N-H⋯S inter-actions link these dimers into chains propagating along the c axis.Entities:
Year: 2012 PMID: 22590400 PMCID: PMC3344638 DOI: 10.1107/S160053681201759X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H12Cl2N2OS | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 6026 reflections |
| θ = 1.5–25.0° | |
| µ = 0.62 mm−1 | |
| β = 109.399 (4)° | Block, yellow |
| 0.42 × 0.41 × 0.39 mm | |
| Bruker SMART APEX CCD area-detector diffractometer | 4727 independent reflections |
| Radiation source: fine-focus sealed tube | 3802 reflections with |
| Graphite monochromator | |
| Detector resolution: 83.66 pixels mm-1 | θmax = 25.0°, θmin = 1.5° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 14457 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4727 reflections | (Δ/σ)max < 0.001 |
| 307 parameters | Δρmax = 0.40 e Å−3 |
| 0 restraints | Δρmin = −0.33 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | −0.02869 (4) | −0.00674 (6) | 0.33632 (3) | 0.04643 (17) | |
| S2 | 0.23770 (4) | 0.49698 (6) | 0.02320 (4) | 0.04616 (17) | |
| Cl1 | −0.08277 (6) | −0.17066 (6) | 0.15579 (5) | 0.0684 (2) | |
| Cl2 | 0.52142 (7) | 0.18550 (11) | 0.47501 (6) | 0.1086 (4) | |
| Cl3 | 0.38361 (6) | 0.18324 (8) | 0.09743 (5) | 0.0738 (2) | |
| Cl4 | −0.23405 (6) | 0.18796 (9) | −0.20368 (5) | 0.0792 (3) | |
| O1 | 0.20202 (12) | 0.12434 (18) | 0.23359 (10) | 0.0555 (5) | |
| O2 | 0.05946 (12) | 0.18451 (16) | 0.07274 (10) | 0.0543 (5) | |
| N1 | 0.01342 (13) | 0.07137 (17) | 0.21195 (10) | 0.0385 (4) | |
| H1A | 0.0562 | 0.0916 | 0.1904 | 0.046* | |
| N2 | 0.14546 (13) | 0.04033 (17) | 0.32535 (11) | 0.0400 (4) | |
| H2A | 0.1648 | 0.0114 | 0.3722 | 0.048* | |
| N3 | 0.21846 (13) | 0.32495 (18) | 0.11973 (11) | 0.0430 (5) | |
| H3A | 0.1852 | 0.2670 | 0.1311 | 0.052* | |
| N4 | 0.08539 (13) | 0.35124 (17) | 0.00731 (11) | 0.0382 (4) | |
| H4A | 0.0585 | 0.3957 | −0.0334 | 0.046* | |
| C1 | −0.14018 (18) | −0.0300 (2) | 0.13660 (14) | 0.0450 (6) | |
| C2 | −0.2387 (2) | −0.0240 (3) | 0.09106 (16) | 0.0620 (8) | |
| H2 | −0.2740 | −0.0952 | 0.0724 | 0.074* | |
| C3 | −0.2839 (2) | 0.0878 (3) | 0.07364 (18) | 0.0734 (9) | |
| H3 | −0.3500 | 0.0921 | 0.0431 | 0.088* | |
| C4 | −0.2326 (2) | 0.1928 (3) | 0.10078 (19) | 0.0683 (8) | |
| H4 | −0.2636 | 0.2682 | 0.0878 | 0.082* | |
| C5 | −0.13441 (19) | 0.1870 (2) | 0.14771 (16) | 0.0540 (6) | |
| H5 | −0.0997 | 0.2584 | 0.1669 | 0.065* | |
| C6 | −0.08857 (16) | 0.0750 (2) | 0.16572 (13) | 0.0394 (5) | |
| C7 | 0.04504 (15) | 0.03795 (19) | 0.28697 (13) | 0.0358 (5) | |
| C8 | 0.21855 (16) | 0.0824 (2) | 0.29900 (14) | 0.0437 (5) | |
| C9 | 0.31985 (18) | 0.0696 (3) | 0.35824 (16) | 0.0608 (7) | |
| H9A | 0.3219 | 0.1128 | 0.4056 | 0.073* | |
| H9B | 0.3322 | −0.0161 | 0.3715 | 0.073* | |
| C10 | 0.39933 (19) | 0.1170 (3) | 0.33112 (17) | 0.0644 (8) | |
| H10A | 0.3885 | 0.2036 | 0.3200 | 0.077* | |
| H10B | 0.3955 | 0.0764 | 0.2825 | 0.077* | |
| C11 | 0.5010 (2) | 0.0994 (4) | 0.38907 (18) | 0.0743 (9) | |
| H11A | 0.5491 | 0.1226 | 0.3647 | 0.089* | |
| H11B | 0.5107 | 0.0135 | 0.4027 | 0.089* | |
| C12 | 0.39626 (18) | 0.2933 (2) | 0.16893 (14) | 0.0487 (6) | |
| C13 | 0.48814 (19) | 0.3193 (3) | 0.22162 (17) | 0.0610 (7) | |
| H13 | 0.5437 | 0.2795 | 0.2183 | 0.073* | |
| C14 | 0.4967 (2) | 0.4046 (3) | 0.27902 (18) | 0.0690 (8) | |
| H14 | 0.5584 | 0.4223 | 0.3149 | 0.083* | |
| C15 | 0.4150 (2) | 0.4644 (3) | 0.28422 (18) | 0.0700 (8) | |
| H15 | 0.4217 | 0.5219 | 0.3235 | 0.084* | |
| C16 | 0.32314 (19) | 0.4390 (3) | 0.23107 (16) | 0.0562 (7) | |
| H16 | 0.2679 | 0.4798 | 0.2343 | 0.067* | |
| C17 | 0.31345 (16) | 0.3533 (2) | 0.17331 (13) | 0.0435 (6) | |
| C18 | 0.17954 (15) | 0.3847 (2) | 0.05298 (12) | 0.0355 (5) | |
| C19 | 0.02925 (16) | 0.2559 (2) | 0.01862 (13) | 0.0398 (5) | |
| C20 | −0.07275 (16) | 0.2507 (2) | −0.03992 (15) | 0.0455 (6) | |
| H20A | −0.0723 | 0.2884 | −0.0883 | 0.055* | |
| H20B | −0.1165 | 0.2979 | −0.0202 | 0.055* | |
| C21 | −0.11259 (18) | 0.1228 (2) | −0.05729 (15) | 0.0527 (6) | |
| H21A | −0.1075 | 0.0822 | −0.0084 | 0.063* | |
| H21B | −0.0726 | 0.0776 | −0.0817 | 0.063* | |
| C22 | −0.2184 (2) | 0.1201 (3) | −0.11039 (17) | 0.0689 (8) | |
| H22A | −0.2588 | 0.1636 | −0.0854 | 0.083* | |
| H22B | −0.2410 | 0.0360 | −0.1180 | 0.083* |
| S1 | 0.0392 (3) | 0.0612 (4) | 0.0382 (3) | −0.0085 (3) | 0.0118 (3) | −0.0020 (3) |
| S2 | 0.0413 (3) | 0.0525 (4) | 0.0396 (3) | −0.0108 (3) | 0.0067 (3) | 0.0051 (3) |
| Cl1 | 0.0886 (5) | 0.0397 (4) | 0.0721 (5) | −0.0045 (3) | 0.0203 (4) | −0.0071 (3) |
| Cl2 | 0.0732 (6) | 0.1360 (9) | 0.0916 (7) | −0.0178 (6) | −0.0060 (5) | −0.0378 (6) |
| Cl3 | 0.0698 (5) | 0.0801 (5) | 0.0665 (5) | 0.0138 (4) | 0.0159 (4) | −0.0065 (4) |
| Cl4 | 0.0651 (5) | 0.0973 (6) | 0.0554 (4) | −0.0125 (4) | −0.0066 (4) | 0.0048 (4) |
| O1 | 0.0387 (9) | 0.0765 (12) | 0.0466 (10) | −0.0065 (9) | 0.0076 (8) | 0.0167 (9) |
| O2 | 0.0442 (9) | 0.0552 (10) | 0.0505 (10) | −0.0112 (8) | −0.0018 (8) | 0.0148 (9) |
| N1 | 0.0307 (9) | 0.0449 (11) | 0.0362 (10) | −0.0047 (8) | 0.0062 (8) | 0.0032 (8) |
| N2 | 0.0336 (10) | 0.0486 (11) | 0.0332 (10) | −0.0001 (8) | 0.0050 (8) | 0.0053 (8) |
| N3 | 0.0321 (10) | 0.0524 (12) | 0.0382 (10) | −0.0086 (8) | 0.0031 (8) | 0.0081 (9) |
| N4 | 0.0333 (9) | 0.0435 (10) | 0.0326 (9) | −0.0016 (8) | 0.0039 (8) | 0.0036 (8) |
| C1 | 0.0467 (13) | 0.0463 (13) | 0.0381 (13) | −0.0081 (11) | 0.0089 (11) | −0.0007 (10) |
| C2 | 0.0508 (15) | 0.077 (2) | 0.0480 (15) | −0.0241 (15) | 0.0033 (13) | −0.0025 (14) |
| C3 | 0.0405 (15) | 0.104 (3) | 0.0628 (19) | −0.0010 (17) | −0.0006 (13) | 0.0162 (18) |
| C4 | 0.0504 (16) | 0.073 (2) | 0.072 (2) | 0.0178 (15) | 0.0067 (15) | 0.0119 (16) |
| C5 | 0.0520 (15) | 0.0462 (14) | 0.0574 (16) | 0.0027 (12) | 0.0095 (13) | 0.0021 (12) |
| C6 | 0.0350 (11) | 0.0460 (13) | 0.0337 (11) | −0.0014 (10) | 0.0066 (9) | 0.0044 (10) |
| C7 | 0.0345 (11) | 0.0316 (11) | 0.0374 (12) | −0.0011 (9) | 0.0067 (9) | −0.0026 (9) |
| C8 | 0.0360 (12) | 0.0510 (14) | 0.0399 (13) | −0.0020 (10) | 0.0071 (10) | 0.0040 (11) |
| C9 | 0.0411 (14) | 0.087 (2) | 0.0479 (15) | −0.0073 (14) | 0.0059 (12) | 0.0124 (14) |
| C10 | 0.0419 (14) | 0.093 (2) | 0.0562 (17) | 0.0013 (14) | 0.0129 (13) | 0.0058 (16) |
| C11 | 0.0378 (14) | 0.113 (3) | 0.0657 (19) | 0.0026 (16) | 0.0092 (13) | −0.0008 (18) |
| C12 | 0.0416 (13) | 0.0552 (15) | 0.0441 (14) | −0.0034 (11) | 0.0074 (11) | 0.0109 (11) |
| C13 | 0.0343 (13) | 0.0751 (19) | 0.0650 (18) | 0.0009 (13) | 0.0049 (12) | 0.0169 (16) |
| C14 | 0.0412 (15) | 0.084 (2) | 0.0635 (19) | −0.0182 (15) | −0.0068 (13) | 0.0083 (17) |
| C15 | 0.0652 (19) | 0.075 (2) | 0.0554 (18) | −0.0198 (16) | 0.0008 (15) | −0.0108 (15) |
| C16 | 0.0448 (14) | 0.0633 (17) | 0.0530 (16) | −0.0035 (12) | 0.0065 (12) | −0.0016 (13) |
| C17 | 0.0339 (12) | 0.0532 (14) | 0.0364 (12) | −0.0063 (10) | 0.0024 (10) | 0.0096 (11) |
| C18 | 0.0302 (10) | 0.0407 (12) | 0.0327 (11) | 0.0019 (9) | 0.0066 (9) | −0.0030 (9) |
| C19 | 0.0346 (11) | 0.0408 (12) | 0.0403 (13) | −0.0014 (10) | 0.0073 (10) | −0.0017 (10) |
| C20 | 0.0321 (11) | 0.0481 (14) | 0.0492 (14) | −0.0023 (10) | 0.0041 (10) | 0.0025 (11) |
| C21 | 0.0456 (14) | 0.0565 (15) | 0.0486 (15) | −0.0126 (12) | 0.0058 (12) | 0.0036 (12) |
| C22 | 0.0501 (16) | 0.089 (2) | 0.0587 (17) | −0.0276 (15) | 0.0064 (13) | −0.0009 (16) |
| S1—C7 | 1.671 (2) | C5—H5 | 0.9300 |
| S2—C18 | 1.673 (2) | C8—C9 | 1.502 (3) |
| Cl1—C1 | 1.727 (3) | C9—C10 | 1.481 (4) |
| Cl2—C11 | 1.758 (3) | C9—H9A | 0.9700 |
| Cl3—C12 | 1.732 (3) | C9—H9B | 0.9700 |
| Cl4—C22 | 1.788 (3) | C10—C11 | 1.504 (4) |
| O1—C8 | 1.217 (3) | C10—H10A | 0.9700 |
| O2—C19 | 1.215 (3) | C10—H10B | 0.9700 |
| N1—C7 | 1.332 (3) | C11—H11A | 0.9700 |
| N1—C6 | 1.429 (3) | C11—H11B | 0.9700 |
| N1—H1A | 0.8600 | C12—C13 | 1.379 (4) |
| N2—C8 | 1.371 (3) | C12—C17 | 1.386 (3) |
| N2—C7 | 1.381 (3) | C13—C14 | 1.371 (4) |
| N2—H2A | 0.8600 | C13—H13 | 0.9300 |
| N3—C18 | 1.323 (3) | C14—C15 | 1.375 (5) |
| N3—C17 | 1.423 (3) | C14—H14 | 0.9300 |
| N3—H3A | 0.8600 | C15—C16 | 1.381 (4) |
| N4—C19 | 1.376 (3) | C15—H15 | 0.9300 |
| N4—C18 | 1.382 (3) | C16—C17 | 1.377 (4) |
| N4—H4A | 0.8600 | C16—H16 | 0.9300 |
| C1—C6 | 1.374 (3) | C19—C20 | 1.499 (3) |
| C1—C2 | 1.385 (4) | C20—C21 | 1.505 (4) |
| C2—C3 | 1.371 (5) | C20—H20A | 0.9700 |
| C2—H2 | 0.9300 | C20—H20B | 0.9700 |
| C3—C4 | 1.365 (5) | C21—C22 | 1.507 (4) |
| C3—H3 | 0.9300 | C21—H21A | 0.9700 |
| C4—C5 | 1.388 (4) | C21—H21B | 0.9700 |
| C4—H4 | 0.9300 | C22—H22A | 0.9700 |
| C5—C6 | 1.379 (3) | C22—H22B | 0.9700 |
| C7—N1—C6 | 122.78 (18) | C10—C11—Cl2 | 112.7 (2) |
| C7—N1—H1A | 118.6 | C10—C11—H11A | 109.1 |
| C6—N1—H1A | 118.6 | Cl2—C11—H11A | 109.1 |
| C8—N2—C7 | 128.89 (19) | C10—C11—H11B | 109.1 |
| C8—N2—H2A | 115.6 | Cl2—C11—H11B | 109.1 |
| C7—N2—H2A | 115.6 | H11A—C11—H11B | 107.8 |
| C18—N3—C17 | 122.27 (19) | C13—C12—C17 | 120.6 (3) |
| C18—N3—H3A | 118.9 | C13—C12—Cl3 | 119.9 (2) |
| C17—N3—H3A | 118.9 | C17—C12—Cl3 | 119.53 (19) |
| C19—N4—C18 | 128.30 (19) | C14—C13—C12 | 119.2 (3) |
| C19—N4—H4A | 115.8 | C14—C13—H13 | 120.4 |
| C18—N4—H4A | 115.8 | C12—C13—H13 | 120.4 |
| C6—C1—C2 | 120.3 (2) | C13—C14—C15 | 120.8 (3) |
| C6—C1—Cl1 | 120.41 (18) | C13—C14—H14 | 119.6 |
| C2—C1—Cl1 | 119.3 (2) | C15—C14—H14 | 119.6 |
| C3—C2—C1 | 119.5 (3) | C14—C15—C16 | 120.0 (3) |
| C3—C2—H2 | 120.3 | C14—C15—H15 | 120.0 |
| C1—C2—H2 | 120.3 | C16—C15—H15 | 120.0 |
| C4—C3—C2 | 120.6 (3) | C17—C16—C15 | 119.9 (3) |
| C4—C3—H3 | 119.7 | C17—C16—H16 | 120.1 |
| C2—C3—H3 | 119.7 | C15—C16—H16 | 120.1 |
| C3—C4—C5 | 120.1 (3) | C16—C17—C12 | 119.6 (2) |
| C3—C4—H4 | 120.0 | C16—C17—N3 | 119.9 (2) |
| C5—C4—H4 | 120.0 | C12—C17—N3 | 120.5 (2) |
| C6—C5—C4 | 119.7 (3) | N3—C18—N4 | 116.67 (19) |
| C6—C5—H5 | 120.2 | N3—C18—S2 | 123.45 (16) |
| C4—C5—H5 | 120.2 | N4—C18—S2 | 119.88 (16) |
| C1—C6—C5 | 119.8 (2) | O2—C19—N4 | 122.5 (2) |
| C1—C6—N1 | 121.4 (2) | O2—C19—C20 | 123.3 (2) |
| C5—C6—N1 | 118.8 (2) | N4—C19—C20 | 114.20 (19) |
| N1—C7—N2 | 116.99 (19) | C19—C20—C21 | 113.5 (2) |
| N1—C7—S1 | 124.22 (16) | C19—C20—H20A | 108.9 |
| N2—C7—S1 | 118.80 (16) | C21—C20—H20A | 108.9 |
| O1—C8—N2 | 122.7 (2) | C19—C20—H20B | 108.9 |
| O1—C8—C9 | 124.0 (2) | C21—C20—H20B | 108.9 |
| N2—C8—C9 | 113.3 (2) | H20A—C20—H20B | 107.7 |
| C10—C9—C8 | 113.9 (2) | C20—C21—C22 | 112.7 (2) |
| C10—C9—H9A | 108.8 | C20—C21—H21A | 109.1 |
| C8—C9—H9A | 108.8 | C22—C21—H21A | 109.1 |
| C10—C9—H9B | 108.8 | C20—C21—H21B | 109.1 |
| C8—C9—H9B | 108.8 | C22—C21—H21B | 109.1 |
| H9A—C9—H9B | 107.7 | H21A—C21—H21B | 107.8 |
| C9—C10—C11 | 113.9 (2) | C21—C22—Cl4 | 112.16 (19) |
| C9—C10—H10A | 108.8 | C21—C22—H22A | 109.2 |
| C11—C10—H10A | 108.8 | Cl4—C22—H22A | 109.2 |
| C9—C10—H10B | 108.8 | C21—C22—H22B | 109.2 |
| C11—C10—H10B | 108.8 | Cl4—C22—H22B | 109.2 |
| H10A—C10—H10B | 107.7 | H22A—C22—H22B | 107.9 |
| C6—C1—C2—C3 | 1.5 (4) | C17—C12—C13—C14 | 0.6 (4) |
| Cl1—C1—C2—C3 | −178.0 (2) | Cl3—C12—C13—C14 | −178.5 (2) |
| C1—C2—C3—C4 | 0.0 (5) | C12—C13—C14—C15 | −0.3 (4) |
| C2—C3—C4—C5 | −1.2 (5) | C13—C14—C15—C16 | −0.2 (5) |
| C3—C4—C5—C6 | 1.0 (5) | C14—C15—C16—C17 | 0.5 (5) |
| C2—C1—C6—C5 | −1.8 (4) | C15—C16—C17—C12 | −0.2 (4) |
| Cl1—C1—C6—C5 | 177.8 (2) | C15—C16—C17—N3 | 178.4 (2) |
| C2—C1—C6—N1 | −179.2 (2) | C13—C12—C17—C16 | −0.4 (4) |
| Cl1—C1—C6—N1 | 0.4 (3) | Cl3—C12—C17—C16 | 178.7 (2) |
| C4—C5—C6—C1 | 0.5 (4) | C13—C12—C17—N3 | −179.0 (2) |
| C4—C5—C6—N1 | 178.0 (2) | Cl3—C12—C17—N3 | 0.1 (3) |
| C7—N1—C6—C1 | −76.9 (3) | C18—N3—C17—C16 | 89.7 (3) |
| C7—N1—C6—C5 | 105.7 (3) | C18—N3—C17—C12 | −91.7 (3) |
| C6—N1—C7—N2 | −178.95 (19) | C17—N3—C18—N4 | −177.8 (2) |
| C6—N1—C7—S1 | 1.4 (3) | C17—N3—C18—S2 | 1.4 (3) |
| C8—N2—C7—N1 | 6.1 (3) | C19—N4—C18—N3 | −6.3 (3) |
| C8—N2—C7—S1 | −174.26 (19) | C19—N4—C18—S2 | 174.38 (18) |
| C7—N2—C8—O1 | −0.9 (4) | C18—N4—C19—O2 | −1.8 (4) |
| C7—N2—C8—C9 | 180.0 (2) | C18—N4—C19—C20 | 176.4 (2) |
| O1—C8—C9—C10 | 2.1 (4) | O2—C19—C20—C21 | −33.5 (3) |
| N2—C8—C9—C10 | −178.8 (3) | N4—C19—C20—C21 | 148.3 (2) |
| C8—C9—C10—C11 | −177.6 (3) | C19—C20—C21—C22 | 174.7 (2) |
| C9—C10—C11—Cl2 | −66.2 (4) | C20—C21—C22—Cl4 | 61.0 (3) |
| H··· | ||||
| N1—H1 | 0.86 | 2.01 | 2.675 (3) | 133 |
| N3—H3 | 0.86 | 1.98 | 2.652 (3) | 134 |
| N1—H1 | 0.86 | 2.37 | 3.070 (3) | 138 |
| N3—H3 | 0.86 | 2.37 | 3.073 (3) | 139 |
| N2—H2 | 0.86 | 2.58 | 3.404 (2) | 160 |
| N4—H4 | 0.86 | 2.58 | 3.433 (2) | 174 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.01 | 2.675 (3) | 133 |
| N3—H3 | 0.86 | 1.98 | 2.652 (3) | 134 |
| N1—H1 | 0.86 | 2.37 | 3.070 (3) | 138 |
| N3—H3 | 0.86 | 2.37 | 3.073 (3) | 139 |
| N2—H2 | 0.86 | 2.58 | 3.404 (2) | 160 |
| N4—H4 | 0.86 | 2.58 | 3.433 (2) | 174 |
Symmetry codes: (i) ; (ii) .