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Literature DB >> 22582053

Biochemical characterization of a novel haloalkane dehalogenase from a cold-adapted bacterium.

Ivana Drienovska¹, Eva Chovancova, Tana Koudelakova, Jiri Damborsky, Radka Chaloupkova.

Abstract

A haloalkane dehalogenase, DpcA, from Psychrobacter cryohalolentis K5, representing a novel psychrophilic member of the haloalkane dehalogenase family, was identified and biochemically characterized. DpcA exhibited a unique temperature profile with exceptionally high activities at low temperatures. The psychrophilic properties of DpcA make this enzyme promising for various environmental applications.

Entities: Chemical Species

Mesh：

Substances：

Year: 2012 PMID： 22582053 PMCID： PMC3416366 DOI： 10.1128/AEM.00485-12

Source DB: PubMed Journal: Appl Environ Microbiol ISSN： 0099-2240 Impact factor: 4.792

31 in total

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Journal: Curr Opin Chem Biol Date: 2001-04 Impact factor: 8.822

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Authors: Ricardo Cavicchioli; Khawar S Siddiqui; David Andrews; Kevin R Sowers
Journal: Curr Opin Biotechnol Date: 2002-06 Impact factor: 9.740

Review 3. Extremophiles as a source for novel enzymes.

Authors: Bertus van den Burg
Journal: Curr Opin Microbiol Date: 2003-06 Impact factor: 7.934

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Authors: Dick B Janssen
Journal: Curr Opin Chem Biol Date: 2004-04 Impact factor: 8.822

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Journal: FEMS Microbiol Rev Date: 2004-02 Impact factor: 16.408

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Authors: Zbynek Prokop; Frantisek Oplustil; Joseph DeFrank; Jirí Damborský
Journal: Biotechnol J Date: 2006-12 Impact factor: 4.677

7. Purification and characterization of a haloalkane dehalogenase of a new substrate class from a gamma-hexachlorocyclohexane-degrading bacterium, Sphingomonas paucimobilis UT26.

Authors: Y Nagata; K Miyauchi; J Damborsky; K Manova; A Ansorgova; M Takagi
Journal: Appl Environ Microbiol Date: 1997-09 Impact factor: 4.792

8. Biochemical characteristics of the novel haloalkane dehalogenase DatA, isolated from the plant pathogen Agrobacterium tumefaciens C58.

Authors: Khomaini Hasan; Andrea Fortova; Tana Koudelakova; Radka Chaloupkova; Mayuko Ishitsuka; Yuji Nagata; Jiri Damborsky; Zbynek Prokop
Journal: Appl Environ Microbiol Date: 2010-12-30 Impact factor: 4.792

9. The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata.

Authors: Konstantinos Liolios; I-Min A Chen; Konstantinos Mavromatis; Nektarios Tavernarakis; Philip Hugenholtz; Victor M Markowitz; Nikos C Kyrpides
Journal: Nucleic Acids Res Date: 2009-11-13 Impact factor: 16.971

10. MUSCLE: a multiple sequence alignment method with reduced time and space complexity.

Authors: Robert C Edgar
Journal: BMC Bioinformatics Date: 2004-08-19 Impact factor: 3.169

11 in total

1. Crystallographic analysis of new psychrophilic haloalkane dehalogenases: DpcA from Psychrobacter cryohalolentis K5 and DmxA from Marinobacter sp. ELB17.

Authors: Katsiaryna Tratsiak; Oksana Degtjarik; Ivana Drienovska; Lukas Chrast; Pavlina Rezacova; Michal Kuty; Radka Chaloupkova; Jiri Damborsky; Ivana Kuta Smatanova
Journal: Acta Crystallogr Sect F Struct Biol Cryst Commun Date: 2013-05-25

Review 2. Psychrophilic enzymes: structural adaptation, pharmaceutical and industrial applications.

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Journal: Appl Microbiol Biotechnol Date: 2021-01-11 Impact factor: 4.813

3. A Haloalkane Dehalogenase from a Marine Microbial Consortium Possessing Exceptionally Broad Substrate Specificity.

Authors: Tomas Buryska; Petra Babkova; Ondrej Vavra; Jiri Damborsky; Zbynek Prokop
Journal: Appl Environ Microbiol Date: 2018-01-02 Impact factor: 4.792

4. A Haloalkane Dehalogenase from Saccharomonospora viridis Strain DSM 43017, a Compost Bacterium with Unusual Catalytic Residues, Unique (S)-Enantiopreference, and High Thermostability.

Authors: Klaudia Chmelova; Eva Sebestova; Veronika Liskova; Andy Beier; David Bednar; Zbynek Prokop; Radka Chaloupkova; Jiri Damborsky
Journal: Appl Environ Microbiol Date: 2020-08-18 Impact factor: 4.792

Review 5. Halophiles: biology, adaptation, and their role in decontamination of hypersaline environments.

Authors: Mohamed Faraj Edbeib; Roswanira Abdul Wahab; Fahrul Huyop
Journal: World J Microbiol Biotechnol Date: 2016-06-25 Impact factor: 3.312

6. Biochemical characterization of two haloalkane dehalogenases: DccA from Caulobacter crescentus and DsaA from Saccharomonospora azurea.

Authors: Lauren Carlucci; Edward Zhou; Vladimir N Malashkevich; Steven C Almo; Emily C Mundorff
Journal: Protein Sci Date: 2016-02-21 Impact factor: 6.725

7. Culture-dependent and independent approaches for identifying novel halogenases encoded by Crambe crambe (marine sponge) microbiota.

Authors: Başak Öztürk; Lenny de Jaeger; Hauke Smidt; Detmer Sipkema
Journal: Sci Rep Date: 2013-09-27 Impact factor: 4.379