Literature DB >> 22578495

A-to-I RNA editing: effects on proteins key to neural excitability.

Joshua J C Rosenthal1, Peter H Seeburg.   

Abstract

RNA editing by adenosine deamination is a process used to diversify the proteome. The expression of ADARs, the editing enzymes, is ubiquitous among true metazoans, and so adenosine deamination is thought to be universal. By changing codons at the level of mRNA, protein function can be altered, perhaps in response to physiological demand. Although the number of editing sites identified in recent years has been rising exponentially, their effects on protein function, in general, are less well understood. This review assesses the state of the field and highlights particular cases where the biophysical alterations and functional effects caused by RNA editing have been studied in detail.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22578495      PMCID: PMC3724421          DOI: 10.1016/j.neuron.2012.04.010

Source DB:  PubMed          Journal:  Neuron        ISSN: 0896-6273            Impact factor:   17.173


  57 in total

1.  Three distinct and sequential steps in the release of sodium ions by the Na+/K+-ATPase.

Authors:  M Holmgren; J Wagg; F Bezanilla; R F Rakowski; P De Weer; D C Gadsby
Journal:  Nature       Date:  2000-02-24       Impact factor: 49.962

2.  Mechanisms for activation and antagonism of an AMPA-sensitive glutamate receptor: crystal structures of the GluR2 ligand binding core.

Authors:  N Armstrong; E Gouaux
Journal:  Neuron       Date:  2000-10       Impact factor: 17.173

3.  Potassium channel receptor site for the inactivation gate and quaternary amine inhibitors.

Authors:  M Zhou; J H Morais-Cabral; S Mann; R MacKinnon
Journal:  Nature       Date:  2001-06-07       Impact factor: 49.962

Review 4.  The intricate relationship between RNA structure, editing, and splicing.

Authors:  Leila E Rieder; Robert A Reenan
Journal:  Semin Cell Dev Biol       Date:  2011-12-08       Impact factor: 7.727

5.  RNA editing modulates the binding of drugs and highly unsaturated fatty acids to the open pore of Kv potassium channels.

Authors:  Niels Decher; Anne K Streit; Markus Rapedius; Michael F Netter; Stefanie Marzian; Petra Ehling; Günter Schlichthörl; Tobias Craan; Vijay Renigunta; Annemarie Köhler; Richard C Dodel; Ricardo A Navarro-Polanco; Regina Preisig-Müller; Gerhard Klebe; Thomas Budde; Thomas Baukrowitz; Jürgen Daut
Journal:  EMBO J       Date:  2010-05-11       Impact factor: 11.598

6.  A-to-I pre-mRNA editing in Drosophila is primarily involved in adult nervous system function and integrity.

Authors:  M J Palladino; L P Keegan; M A O'Connell; R A Reenan
Journal:  Cell       Date:  2000-08-18       Impact factor: 41.582

7.  RNA editing underlies temperature adaptation in K+ channels from polar octopuses.

Authors:  Sandra Garrett; Joshua J C Rosenthal
Journal:  Science       Date:  2012-01-05       Impact factor: 47.728

8.  Profound downregulation of the RNA editing enzyme ADAR2 in ALS spinal motor neurons.

Authors:  Takuto Hideyama; Takenari Yamashita; Hitoshi Aizawa; Shoji Tsuji; Akiyoshi Kakita; Hitoshi Takahashi; Shin Kwak
Journal:  Neurobiol Dis       Date:  2011-12-28       Impact factor: 5.996

9.  Widespread RNA and DNA sequence differences in the human transcriptome.

Authors:  Mingyao Li; Isabel X Wang; Yun Li; Alan Bruzel; Allison L Richards; Jonathan M Toung; Vivian G Cheung
Journal:  Science       Date:  2011-05-19       Impact factor: 47.728

10.  Functional conservation in human and Drosophila of Metazoan ADAR2 involved in RNA editing: loss of ADAR1 in insects.

Authors:  Liam P Keegan; Leeane McGurk; Juan Pablo Palavicini; James Brindle; Simona Paro; Xianghua Li; Joshua J C Rosenthal; Mary A O'Connell
Journal:  Nucleic Acids Res       Date:  2011-05-27       Impact factor: 16.971

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  87 in total

1.  Antagonistic and stimulative roles of ADAR1 in RNA silencing.

Authors:  Kazuko Nishikura; Masayuki Sakurai; Kantaro Ariyoshi; Hiromitsu Ota
Journal:  RNA Biol       Date:  2013-07-30       Impact factor: 4.652

2.  Correction of mutations within the cystic fibrosis transmembrane conductance regulator by site-directed RNA editing.

Authors:  Maria Fernanda Montiel-Gonzalez; Isabel Vallecillo-Viejo; Guillermo A Yudowski; Joshua J C Rosenthal
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-09       Impact factor: 11.205

3.  Human coding RNA editing is generally nonadaptive.

Authors:  Guixia Xu; Jianzhi Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-24       Impact factor: 11.205

4.  RNA ligation in neurons by RtcB inhibits axon regeneration.

Authors:  Sara Guckian Kosmaczewski; Sung Min Han; Bingjie Han; Benjamin Irving Meyer; Huma S Baig; Wardah Athar; Alexander T Lin-Moore; Michael R Koelle; Marc Hammarlund
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-22       Impact factor: 11.205

Review 5.  Novel RNA modifications in the nervous system: form and function.

Authors:  John S Satterlee; Maria Basanta-Sanchez; Sandra Blanco; Jin Billy Li; Kate Meyer; Jonathan Pollock; Ghazaleh Sadri-Vakili; Agnieszka Rybak-Wolf
Journal:  J Neurosci       Date:  2014-11-12       Impact factor: 6.167

6.  The dsRBP and inactive editor ADR-1 utilizes dsRNA binding to regulate A-to-I RNA editing across the C. elegans transcriptome.

Authors:  Michael C Washburn; Boyko Kakaradov; Balaji Sundararaman; Emily Wheeler; Shawn Hoon; Gene W Yeo; Heather A Hundley
Journal:  Cell Rep       Date:  2014-02-06       Impact factor: 9.423

7.  A unique gene expression signature associated with serotonin 2C receptor RNA editing in the prefrontal cortex and altered in suicide.

Authors:  Antonio Fabio Di Narzo; Alexey Kozlenkov; Panos Roussos; Ke Hao; Yasmin Hurd; David A Lewis; Etienne Sibille; Larry J Siever; Eugene Koonin; Stella Dracheva
Journal:  Hum Mol Genet       Date:  2014-04-29       Impact factor: 6.150

8.  Reovirus-mediated induction of ADAR1 (p150) minimally alters RNA editing patterns in discrete brain regions.

Authors:  Jennifer L Hood; Michael V Morabito; Charles R Martinez; James A Gilbert; Elizabeth A Ferrick; Gregory D Ayers; James D Chappell; Terence S Dermody; Ronald B Emeson
Journal:  Mol Cell Neurosci       Date:  2014-06-04       Impact factor: 4.314

9.  Noncoding regions of C. elegans mRNA undergo selective adenosine to inosine deamination and contain a small number of editing sites per transcript.

Authors:  Emily C Wheeler; Michael C Washburn; Francois Major; Douglas B Rusch; Heather A Hundley
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

10.  Dynamic regulation of RNA editing in human brain development and disease.

Authors:  Taeyoung Hwang; Chul-Kee Park; Anthony K L Leung; Yuan Gao; Thomas M Hyde; Joel E Kleinman; Anandita Rajpurohit; Ran Tao; Joo Heon Shin; Daniel R Weinberger
Journal:  Nat Neurosci       Date:  2016-06-27       Impact factor: 24.884

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