Literature DB >> 23949595

Antagonistic and stimulative roles of ADAR1 in RNA silencing.

Kazuko Nishikura1, Masayuki Sakurai, Kantaro Ariyoshi, Hiromitsu Ota.   

Abstract

Adenosine deaminases acting on RNA (ADARs) are involved in RNA editing that converts adenosine residues to inosine specifically in double-stranded RNAs (dsRNA). This A-to-I RNA editing pathway and the RNA interference (RNAi) pathway seem to interact antagonistically by competing for their common dsRNA substrates. For instance, A-to-I editing of certain microRNA (miRNA) precursors by ADAR1 and ADAR2 inhibits their processing to mature miRNAs. Recent studies unexpectedly revealed the presence of a completely different type of interaction between the RNA editing mechanism and the RNAi machinery. ADAR1 forms a complex via direct protein-protein interaction with Dicer, an RNase III gene family member involved in the RNAi mechanism. ADAR1 in the Dicer complex promotes pre-miRNA cleavage by Dicer and facilitates loading of miRNA onto RNA-induced silencing complexes, giving rise to an unsuspected stimulative function of ADAR1 on miRNA processing and RNAi mechanisms. ADAR1 differentiates its functions in RNA editing and RNAi by formation of either ADAR1-ADAR1 homodimer or Dicer-ADAR1 heterodimer complexes. Expression of miRNAs is globally inhibited in ADAR1-null mouse embryos, which, in turn, alters expression of their target genes and may contribute to their embryonic lethal phenotype.

Entities:  

Keywords:  ADAR1; Dicer; RISC; RNA editing; RNAi; apoptosis; dsRNA; embryo development; miRNA biogenesis; miRNA targets

Mesh:

Substances:

Year:  2013        PMID: 23949595      PMCID: PMC3817143          DOI: 10.4161/rna.25947

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  60 in total

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Authors:  B L Bass
Journal:  Cell       Date:  2000-04-28       Impact factor: 41.582

Review 2.  RNA editing by adenosine deaminases that act on RNA.

Authors:  Brenda L Bass
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

3.  Mutations in RNAi rescue aberrant chemotaxis of ADAR mutants.

Authors:  Leath A Tonkin; Brenda L Bass
Journal:  Science       Date:  2003-12-05       Impact factor: 47.728

4.  RNAi is antagonized by A-->I hyper-editing.

Authors:  A D Scadden; C W Smith
Journal:  EMBO Rep       Date:  2001-11-21       Impact factor: 8.807

5.  RNA editing by ADARs is important for normal behavior in Caenorhabditis elegans.

Authors:  Leath A Tonkin; Lisa Saccomanno; Daniel P Morse; Thomas Brodigan; Michael Krause; Brenda L Bass
Journal:  EMBO J       Date:  2002-11-15       Impact factor: 11.598

6.  Requirement of dimerization for RNA editing activity of adenosine deaminases acting on RNA.

Authors:  Dan-Sung C Cho; Weidong Yang; Joshua T Lee; Ramin Shiekhattar; John M Murray; Kazuko Nishikura
Journal:  J Biol Chem       Date:  2003-03-04       Impact factor: 5.157

Review 7.  The dsRNA binding protein family: critical roles, diverse cellular functions.

Authors:  Laura R Saunders; Glen N Barber
Journal:  FASEB J       Date:  2003-06       Impact factor: 5.191

8.  Liver disintegration in the mouse embryo caused by deficiency in the RNA-editing enzyme ADAR1.

Authors:  Jochen C Hartner; Carolin Schmittwolf; Andreas Kispert; Albrecht M Müller; Miyoko Higuchi; Peter H Seeburg
Journal:  J Biol Chem       Date:  2003-11-12       Impact factor: 5.157

9.  Stress-induced apoptosis associated with null mutation of ADAR1 RNA editing deaminase gene.

Authors:  Qingde Wang; Mana Miyakoda; Weidong Yang; Jaspal Khillan; David L Stachura; Mitchell J Weiss; Kazuko Nishikura
Journal:  J Biol Chem       Date:  2003-11-12       Impact factor: 5.157

10.  Effects of ADARs on small RNA processing pathways in C. elegans.

Authors:  M Bryan Warf; Brent A Shepherd; W Evan Johnson; Brenda L Bass
Journal:  Genome Res       Date:  2012-06-06       Impact factor: 9.043

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  11 in total

1.  MicroRNA-411 and Its 5'-IsomiR Have Distinct Targets and Functions and Are Differentially Regulated in the Vasculature under Ischemia.

Authors:  Reginald V C T van der Kwast; Tamar Woudenberg; Paul H A Quax; A Yaël Nossent
Journal:  Mol Ther       Date:  2019-10-07       Impact factor: 11.454

2.  Inosine RNA modifications are enriched at the codon wobble position in mouse oocytes and eggs†.

Authors:  Pavla Brachova; Nehemiah S Alvarez; Xiaoman Hong; Sumedha Gunewardena; Kailey A Vincent; Keith E Latham; Lane K Christenson
Journal:  Biol Reprod       Date:  2019-11-21       Impact factor: 4.285

Review 3.  A-to-I editing of coding and non-coding RNAs by ADARs.

Authors:  Kazuko Nishikura
Journal:  Nat Rev Mol Cell Biol       Date:  2015-12-09       Impact factor: 94.444

Review 4.  All I's on the RADAR: role of ADAR in gene regulation.

Authors:  Galina Shevchenko; Kevin V Morris
Journal:  FEBS Lett       Date:  2018-05-25       Impact factor: 4.124

5.  Five novel mutations in the ADAR1 gene associated with dyschromatosis symmetrica hereditaria.

Authors:  Qi Liu; Zhen Wang; Yuhong Wu; Lihua Cao; Qingzhu Tang; Xuesha Xing; Hongwei Ma; Shifa Zhang; Yang Luo
Journal:  BMC Med Genet       Date:  2014-06-20       Impact factor: 2.103

Review 6.  A-to-I RNA Editing: Current Knowledge Sources and Computational Approaches with Special Emphasis on Non-Coding RNA Molecules.

Authors:  Giovanni Nigita; Dario Veneziano; Alfredo Ferro
Journal:  Front Bioeng Biotechnol       Date:  2015-03-25

7.  Detection of canonical A-to-G editing events at 3' UTRs and microRNA target sites in human lungs using next-generation sequencing.

Authors:  Ramani Soundararajan; Timothy M Stearns; Anthony L Griswold; Arpit Mehta; Alexander Czachor; Jutaro Fukumoto; Richard F Lockey; Benjamin L King; Narasaiah Kolliputi
Journal:  Oncotarget       Date:  2015-11-03

8.  Adar RNA editing-dependent and -independent effects are required for brain and innate immune functions in Drosophila.

Authors:  Patricia Deng; Anzer Khan; Dionna Jacobson; Nagraj Sambrani; Leeanne McGurk; Xianghua Li; Aswathy Jayasree; Jan Hejatko; Galit Shohat-Ophir; Mary A O'Connell; Jin Billy Li; Liam P Keegan
Journal:  Nat Commun       Date:  2020-03-27       Impact factor: 14.919

9.  Genome-Wide Characterization of RNA Editing Sites in Primary Gastric Adenocarcinoma through RNA-seq Data Analysis.

Authors:  Javad Behroozi; Shirin Shahbazi; Mohammad Reza Bakhtiarizadeh; Habibollah Mahmoodzadeh
Journal:  Int J Genomics       Date:  2020-12-18       Impact factor: 2.326

10.  ADAR1 controls apoptosis of stressed cells by inhibiting Staufen1-mediated mRNA decay.

Authors:  Masayuki Sakurai; Yusuke Shiromoto; Hiromitsu Ota; Chunzi Song; Andrew V Kossenkov; Jayamanna Wickramasinghe; Louise C Showe; Emmanuel Skordalakes; Hsin-Yao Tang; David W Speicher; Kazuko Nishikura
Journal:  Nat Struct Mol Biol       Date:  2017-04-24       Impact factor: 15.369

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