Literature DB >> 22577259

Di-Cysteine S,S-Tetrazine: A Potential Ultra-fast Photochemical Trigger to Explore the Early Events of Peptide/Protein Folding.

Matthew J Tucker1, Mohannad Abdo, Joel R Courter, Jianxin Chen, Amos B Smith, Robin M Hochstrasser.   

Abstract

The tetrazine chromophore holds promise as an effective photochemical trigger to achieve structural release, directed at the determination of peptide/protein motions that occur early in the folding processes. The photochemistry of 3,6-di-cysteine-S,S-tetrazines was examined by femtosecond IR transient absorption spectroscopy. Excitation of the tetrazine chromophore by visible and near UV light in the end yields chemically inert, structurally unobtrusive photoproducts that are not expected to interfere with the conformational dynamics of peptides and proteins. Dicysteine S,S-tetrazine is suggested to undergo photocleavage via a photochemical pathway different than the parent molecule s-tetrazine, based on kinetic measurements that reveal a stepwise reaction pathway of photofragmentation, whereby the initial ring cleavage event occurs prior to the formation of the SCN groups.

Entities:  

Year:  2012        PMID: 22577259      PMCID: PMC3345895          DOI: 10.1016/j.jphotochem.2012.02.014

Source DB:  PubMed          Journal:  J Photochem Photobiol A Chem        ISSN: 1010-6030            Impact factor:   4.291


  29 in total

1.  Interpreting the folding kinetics of helical proteins.

Authors:  Y Zhou; M Karplus
Journal:  Nature       Date:  1999-09-23       Impact factor: 49.962

2.  Protein folding and unfolding on a complex energy landscape.

Authors:  D T Leeson; F Gai; H M Rodriguez; L M Gregoret; R B Dyer
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-14       Impact factor: 11.205

3.  Protein folded states are kinetic hubs.

Authors:  Gregory R Bowman; Vijay S Pande
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-01       Impact factor: 11.205

4.  Watching hydrogen-bond dynamics in a beta-turn by transient two-dimensional infrared spectroscopy.

Authors:  Christoph Kolano; Jan Helbing; Mariusz Kozinski; Wolfram Sander; Peter Hamm
Journal:  Nature       Date:  2006-11-23       Impact factor: 49.962

5.  Chemical, physical, and theoretical kinetics of an ultrafast folding protein.

Authors:  Jan Kubelka; Eric R Henry; Troy Cellmer; James Hofrichter; William A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-25       Impact factor: 11.205

6.  How robust are protein folding simulations with respect to force field parameterization?

Authors:  Stefano Piana; Kresten Lindorff-Larsen; David E Shaw
Journal:  Biophys J       Date:  2011-05-04       Impact factor: 4.033

7.  Direct assessment of the α-helix nucleation time.

Authors:  Arnaldo L Serrano; Matthew J Tucker; Feng Gai
Journal:  J Phys Chem B       Date:  2011-05-13       Impact factor: 2.991

8.  Tetrazine phototriggers: probes for peptide dynamics.

Authors:  Matthew J Tucker; Joel R Courter; Jianxin Chen; Onur Atasoylu; Amos B Smith; Robin M Hochstrasser
Journal:  Angew Chem Int Ed Engl       Date:  2010-05-10       Impact factor: 15.336

9.  Intramolecular disulfide bridges as a phototrigger to monitor the dynamics of small cyclic peptides.

Authors:  Christoph Kolano; Jan Helbing; Götz Bucher; Wolfram Sander; Peter Hamm
Journal:  J Phys Chem B       Date:  2007-09-01       Impact factor: 2.991

10.  Development of ultrafast photochromic organometallics and photoinduced linkage isomerization of arene chromium carbonyl derivatives.

Authors:  Tung T To; Edwin J Heilweil; Charles B Duke; Kristie R Ruddick; Charles Edwin Webster; Theodore J Burkey
Journal:  J Phys Chem A       Date:  2009-03-26       Impact factor: 2.781

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  8 in total

1.  Design, synthesis, and photochemical validation of peptide linchpins containing the S,S-tetrazine phototrigger.

Authors:  Mohannad Abdo; Stephen P Brown; Joel R Courter; Matthew J Tucker; Robin M Hochstrasser; Amos B Smith
Journal:  Org Lett       Date:  2012-06-26       Impact factor: 6.005

Review 2.  Arylation Chemistry for Bioconjugation.

Authors:  Chi Zhang; Ekaterina V Vinogradova; Alexander M Spokoyny; Stephen L Buchwald; Bradley L Pentelute
Journal:  Angew Chem Int Ed Engl       Date:  2019-02-15       Impact factor: 15.336

3.  Nonequilibrium dynamics of helix reorganization observed by transient 2D IR spectroscopy.

Authors:  Matthew J Tucker; Mohannad Abdo; Joel R Courter; Jianxin Chen; Stephen P Brown; Amos B Smith; Robin M Hochstrasser
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-08       Impact factor: 11.205

Review 4.  Applications of two-dimensional infrared spectroscopy.

Authors:  Amanda L Le Sueur; Rachel E Horness; Megan C Thielges
Journal:  Analyst       Date:  2015-07-07       Impact factor: 4.616

5.  The design and synthesis of alanine-rich α-helical peptides constrained by an S,S-tetrazine photochemical trigger: a fragment union approach.

Authors:  Joel R Courter; Mohannad Abdo; Stephen P Brown; Matthew J Tucker; Robin M Hochstrasser; Amos B Smith
Journal:  J Org Chem       Date:  2013-12-20       Impact factor: 4.354

6.  Peptide/protein stapling and unstapling: introduction of s-tetrazine, photochemical release, and regeneration of the peptide/protein.

Authors:  Stephen P Brown; Amos B Smith
Journal:  J Am Chem Soc       Date:  2015-03-20       Impact factor: 15.419

7.  Tetrazine as a general phototrigger to turn on fluorophores.

Authors:  Axel Loredo; Juan Tang; Lushun Wang; Kuan-Lin Wu; Zane Peng; Han Xiao
Journal:  Chem Sci       Date:  2020-04-07       Impact factor: 9.825

8.  Photo-initiated rupture of azobenzene micelles to enable the spectroscopic analysis of antimicrobial peptide dynamics.

Authors:  Matthew G Roberson; Julia M Duncan; Keveen J Flieth; Laina M Geary; Matthew J Tucker
Journal:  RSC Adv       Date:  2020-06-04       Impact factor: 4.036

  8 in total

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