Literature DB >> 17764169

Intramolecular disulfide bridges as a phototrigger to monitor the dynamics of small cyclic peptides.

Christoph Kolano1, Jan Helbing, Götz Bucher, Wolfram Sander, Peter Hamm.   

Abstract

Two cyclic disulfide-bridged tetrapeptides [cyclo(Boc-Cys-Pro-Aib-Cys-OMe) (1) and cyclo(Boc-Cys-Pro-Phe-Cys-OMe) (2)] have been monitored by time-resolved mid-IR spectroscopy in the C=O vibrational range. A conformational change is induced by cleavage of the intramolecular disulfide bridge upon UV excitation (lambda(exc) = 260 nm), giving rise to a pair of cysteinyl radicals (thiyl radicals), which diffuse apart allowing the peptide to change conformation before they undergo quenching. The amide I band reports on the dynamics of the peptide backbone, which evolves on a 100 ps time scale and then stays constant up to 10 micros at low enough concentrations ( approximately 100 mM). To probe specifically the lifetime of the free cysteinyl radicals, time-resolved UV laser flash photolysis has been applied. The concentration of the cysteinyl radical decays nonexponentially, but about 50% are still present after 1 ms. The photocleavable disulfide bridge hence may serve as an intrinsic, naturally occurring phototrigger to study peptide dynamics that opens a wide time-window from a few picoseconds to many hundreds of microseconds.

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Year:  2007        PMID: 17764169     DOI: 10.1021/jp074184g

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  12 in total

Review 1.  Spectroscopic studies of protein folding: linear and nonlinear methods.

Authors:  Arnaldo L Serrano; Matthias M Waegele; Feng Gai
Journal:  Protein Sci       Date:  2011-12-28       Impact factor: 6.725

2.  Design, synthesis, and photochemical validation of peptide linchpins containing the S,S-tetrazine phototrigger.

Authors:  Mohannad Abdo; Stephen P Brown; Joel R Courter; Matthew J Tucker; Robin M Hochstrasser; Amos B Smith
Journal:  Org Lett       Date:  2012-06-26       Impact factor: 6.005

3.  Tightening up the structure, lighting up the pathway: Application of molecular constraints and light to manipulate protein folding, self-assembly and function.

Authors:  Beatrice N Markiewicz; Robert M Culik; Feng Gai
Journal:  Sci China Chem       Date:  2014-12       Impact factor: 9.445

4.  Dual time-resolved temperature-jump fluorescence and infrared spectroscopy for the study of fast protein dynamics.

Authors:  Caitlin M Davis; Michael J Reddish; R Brian Dyer
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2017-02-02       Impact factor: 4.098

5.  The design and synthesis of alanine-rich α-helical peptides constrained by an S,S-tetrazine photochemical trigger: a fragment union approach.

Authors:  Joel R Courter; Mohannad Abdo; Stephen P Brown; Matthew J Tucker; Robin M Hochstrasser; Amos B Smith
Journal:  J Org Chem       Date:  2013-12-20       Impact factor: 4.354

6.  Tetrazine phototriggers: probes for peptide dynamics.

Authors:  Matthew J Tucker; Joel R Courter; Jianxin Chen; Onur Atasoylu; Amos B Smith; Robin M Hochstrasser
Journal:  Angew Chem Int Ed Engl       Date:  2010-05-10       Impact factor: 15.336

7.  Direct measurement of the tryptophan-mediated photocleavage kinetics of a protein disulfide bond.

Authors:  Rachel M Abaskharon; Feng Gai
Journal:  Phys Chem Chem Phys       Date:  2016-03-21       Impact factor: 3.676

Review 8.  Equilibrium versus Nonequilibrium Peptide Dynamics: Insights into Transient 2D IR Spectroscopy.

Authors:  David G Hogle; Amy R Cunningham; Matthew J Tucker
Journal:  J Phys Chem B       Date:  2018-08-10       Impact factor: 2.991

9.  Di-Cysteine S,S-Tetrazine: A Potential Ultra-fast Photochemical Trigger to Explore the Early Events of Peptide/Protein Folding.

Authors:  Matthew J Tucker; Mohannad Abdo; Joel R Courter; Jianxin Chen; Amos B Smith; Robin M Hochstrasser
Journal:  J Photochem Photobiol A Chem       Date:  2012-02-17       Impact factor: 4.291

10.  Intramolecular addition of cysteine thiyl radical to phenylalanine and tyrosine in model peptides, Phe (CysS*) and Tyr(CysS*): a computational study.

Authors:  Sergej Naumov; Christian Schöneich
Journal:  J Phys Chem A       Date:  2009-04-16       Impact factor: 2.781

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