Literature DB >> 22562993

Analysis of predicted carbohydrate transport systems encoded by Bifidobacterium bifidum PRL2010.

Francesca Turroni1, Francesco Strati, Elena Foroni, Fausta Serafini, Sabrina Duranti, Douwe van Sinderen, Marco Ventura.   

Abstract

The Bifidobacterium bifidum PRL2010 genome encodes a relatively small set of predicted carbohydrate transporters. Growth experiments and transcriptome analyses of B. bifidum PRL2010 revealed that carbohydrate utilization in this microorganism appears to be restricted to a relatively low number of carbohydrates.

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Year:  2012        PMID： 22562993      PMCID： PMC3416360          DOI： 10.1128/AEM.00629-12

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  36 in total

Review 1.  Topological predictions for integral membrane permeases of the phosphoenolpyruvate:sugar phosphotransferase system.

Authors:  Thai X Nguyen; Ming-Ren Yen; Ravi D Barabote; Milton H Saier
Journal:  J Mol Microbiol Biotechnol       Date:  2006

2.  Complete genome sequence of Bifidobacterium bifidum S17.

Authors:  Daria Zhurina; Aldert Zomer; Marita Gleinser; Vincenco Francesco Brancaccio; Marc Auchter; Mark S Waidmann; Christina Westermann; Douwe van Sinderen; Christian U Riedel
Journal:  J Bacteriol       Date:  2010-10-29       Impact factor: 3.490

3.  The ClgR protein regulates transcription of the clpP operon in Bifidobacterium breve UCC 2003.

Authors:  Marco Ventura; Ziding Zhang; Michelle Cronin; Carlos Canchaya; John G Kenny; Gerald F Fitzgerald; Douwe van Sinderen
Journal:  J Bacteriol       Date:  2005-12       Impact factor: 3.490

4.  Genome analysis of Bifidobacterium bifidum PRL2010 reveals metabolic pathways for host-derived glycan foraging.

Authors:  Francesca Turroni; Francesca Bottacini; Elena Foroni; Imke Mulder; Jae-Han Kim; Aldert Zomer; Borja Sánchez; Alessandro Bidossi; Alberto Ferrarini; Vanessa Giubellini; Massimo Delledonne; Bernard Henrissat; Pedro Coutinho; Marco Oggioni; Gerald F Fitzgerald; David Mills; Abelardo Margolles; Denise Kelly; Douwe van Sinderen; Marco Ventura
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-25       Impact factor: 11.205

5.  Examination of faecal Bifidobacterium populations in breast- and formula-fed infants during the first 18 months of life.

Authors:  Laure C Roger; Adele Costabile; Diane T Holland; Lesley Hoyles; Anne L McCartney
Journal:  Microbiology       Date:  2010-09-23       Impact factor: 2.777

6.  The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract.

Authors:  Mark A Schell; Maria Karmirantzou; Berend Snel; David Vilanova; Bernard Berger; Gabriella Pessi; Marie-Camille Zwahlen; Frank Desiere; Peer Bork; Michele Delley; R David Pridmore; Fabrizio Arigoni
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-15       Impact factor: 11.205

7.  Sugar transport systems of Bifidobacterium longum NCC2705.

Authors:  Stephan Parche; Johannes Amon; Ivana Jankovic; Enea Rezzonico; Manfred Beleut; Hande Barutçu; Inke Schendel; Mike P Eddy; Andreas Burkovski; Fabrizio Arigoni; Fritz Titgemeyer
Journal:  J Mol Microbiol Biotechnol       Date:  2007

8.  In silico and transcriptional analysis of carbohydrate uptake systems of Streptomyces coelicolor A3(2).

Authors:  Ralph Bertram; Maximilian Schlicht; Kerstin Mahr; Harald Nothaft; Milton H Saier; Fritz Titgemeyer
Journal:  J Bacteriol       Date:  2004-03       Impact factor: 3.490

Review 9.  Structure, function, and evolution of bacterial ATP-binding cassette systems.

Authors:  Amy L Davidson; Elie Dassa; Cedric Orelle; Jue Chen
Journal:  Microbiol Mol Biol Rev       Date:  2008-06       Impact factor: 11.056

10.  TCDB: the Transporter Classification Database for membrane transport protein analyses and information.

Authors:  Milton H Saier; Can V Tran; Ravi D Barabote
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971
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  29 in total

1.  Genomic characterization and transcriptional studies of the starch-utilizing strain Bifidobacterium adolescentis 22L.

Authors:  Sabrina Duranti; Francesca Turroni; Gabriele Andrea Lugli; Christian Milani; Alice Viappiani; Marta Mangifesta; Laura Gioiosa; Paola Palanza; Douwe van Sinderen; Marco Ventura
Journal:  Appl Environ Microbiol       Date:  2014-07-25       Impact factor: 4.792

2.  Exploration of the genomic diversity and core genome of the Bifidobacterium adolescentis phylogenetic group by means of a polyphasic approach.

Authors:  Sabrina Duranti; Francesca Turroni; Christian Milani; Elena Foroni; Francesca Bottacini; Fabio Dal Bello; Alberto Ferrarini; Massimo Delledonne; Douwe van Sinderen; Marco Ventura
Journal:  Appl Environ Microbiol       Date:  2012-10-12       Impact factor: 4.792

Review 3.  Molecular dialogue between the human gut microbiota and the host: a Lactobacillus and Bifidobacterium perspective.

Authors:  Francesca Turroni; Marco Ventura; Ludovica F Buttó; Sabrina Duranti; Paul W O'Toole; Mary O'Connell Motherway; Douwe van Sinderen
Journal:  Cell Mol Life Sci       Date:  2013-03-21       Impact factor: 9.261

4.  The Sortase-Dependent Fimbriome of the Genus Bifidobacterium: Extracellular Structures with Potential To Modulate Microbe-Host Dialogue.

Authors:  Christian Milani; Marta Mangifesta; Leonardo Mancabelli; Gabriele Andrea Lugli; Walter Mancino; Alice Viappiani; Andrea Faccini; Douwe van Sinderen; Marco Ventura; Francesca Turroni
Journal:  Appl Environ Microbiol       Date:  2017-09-15       Impact factor: 4.792

5.  Deciphering bifidobacterial-mediated metabolic interactions and their impact on gut microbiota by a multi-omics approach.

Authors:  Francesca Turroni; Christian Milani; Sabrina Duranti; Leonardo Mancabelli; Marta Mangifesta; Alice Viappiani; Gabriele Andrea Lugli; Chiara Ferrario; Laura Gioiosa; Alberto Ferrarini; Jia Li; Paola Palanza; Massimo Delledonne; Douwe van Sinderen; Marco Ventura
Journal:  ISME J       Date:  2016-02-09       Impact factor: 10.302

6.  Comparative Analyses of the Transport Proteins Encoded within the Genomes of nine Bifidobacterium Species.

Authors:  Hassan Zafar; Milton H Saier
Journal:  Microb Physiol       Date:  2021-09-23

7.  Dissecting the Evolutionary Development of the Species Bifidobacterium animalis through Comparative Genomics Analyses.

Authors:  Gabriele Andrea Lugli; Walter Mancino; Christian Milani; Sabrina Duranti; Leonardo Mancabelli; Stefania Napoli; Marta Mangifesta; Alice Viappiani; Rosaria Anzalone; Giulia Longhi; Douwe van Sinderen; Marco Ventura; Francesca Turroni
Journal:  Appl Environ Microbiol       Date:  2019-03-22       Impact factor: 4.792

8.  Metabolism of four α-glycosidic linkage-containing oligosaccharides by Bifidobacterium breve UCC2003.

Authors:  Kerry Joan O'Connell; Mary O'Connell Motherway; John O'Callaghan; Gerald F Fitzgerald; R Paul Ross; Marco Ventura; Catherine Stanton; Douwe van Sinderen
Journal:  Appl Environ Microbiol       Date:  2013-08-02       Impact factor: 4.792

9.  Exploring Vertical Transmission of Bifidobacteria from Mother to Child.

Authors:  Christian Milani; Leonardo Mancabelli; Gabriele Andrea Lugli; Sabrina Duranti; Francesca Turroni; Chiara Ferrario; Marta Mangifesta; Alice Viappiani; Pamela Ferretti; Valentina Gorfer; Adrian Tett; Nicola Segata; Douwe van Sinderen; Marco Ventura
Journal:  Appl Environ Microbiol       Date:  2015-07-31       Impact factor: 4.792

10.  The ability of bifidobacteria to degrade arabinoxylan oligosaccharide constituents and derived oligosaccharides is strain dependent.

Authors:  Audrey Rivière; Frédéric Moens; Marija Selak; Dominique Maes; Stefan Weckx; Luc De Vuyst
Journal:  Appl Environ Microbiol       Date:  2013-10-18       Impact factor: 4.792
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