Literature DB >> 22562785

Regression-Based Label Fusion for Multi-Atlas Segmentation.

Hongzhi Wang, Jung Wook Suh, Sandhitsu Das, John Pluta, Murat Altinay, Paul Yushkevich.   

Abstract

Automatic segmentation using multi-atlas label fusion has been widely applied in medical image analysis. To simplify the label fusion problem, most methods implicitly make a strong assumption that the segmentation errors produced by different atlases are uncorrelated. We show that violating this assumption significantly reduces the efficiency of multi-atlas segmentation. To address this problem, we propose a regression-based approach for label fusion. Our experiments on segmenting the hippocampus in magnetic resonance images (MRI) show significant improvement over previous label fusion techniques.

Entities:  

Year:  2011        PMID: 22562785      PMCID: PMC3343877          DOI: 10.1109/CVPR.2011.5995382

Source DB:  PubMed          Journal:  Conf Comput Vis Pattern Recognit Workshops        ISSN: 2160-7508


  17 in total

1.  Nonlinear dimensionality reduction by locally linear embedding.

Authors:  S T Roweis; L K Saul
Journal:  Science       Date:  2000-12-22       Impact factor: 47.728

2.  Evaluation of atlas selection strategies for atlas-based image segmentation with application to confocal microscopy images of bee brains.

Authors:  Torsten Rohlfing; Robert Brandt; Randolf Menzel; Calvin R Maurer
Journal:  Neuroimage       Date:  2004-04       Impact factor: 6.556

3.  Appearance and incomplete label matching for diffeomorphic template based hippocampus segmentation.

Authors:  John Pluta; Brian B Avants; Simon Glynn; Suyash Awate; James C Gee; John A Detre
Journal:  Hippocampus       Date:  2009-06       Impact factor: 3.899

4.  MR determination of hippocampal volume: comparison of three methods.

Authors:  D Hasboun; M Chantôme; A Zouaoui; M Sahel; M Deladoeuille; N Sourour; M Duyme; M Baulac; C Marsault; D Dormont
Journal:  AJNR Am J Neuroradiol       Date:  1996 Jun-Jul       Impact factor: 3.825

5.  Unbiased diffeomorphic atlas construction for computational anatomy.

Authors:  S Joshi; Brad Davis; Matthieu Jomier; Guido Gerig
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

6.  Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain.

Authors:  B B Avants; C L Epstein; M Grossman; J C Gee
Journal:  Med Image Anal       Date:  2007-06-23       Impact factor: 8.545

7.  Automated cross-sectional and longitudinal hippocampal volume measurement in mild cognitive impairment and Alzheimer's disease.

Authors:  Kelvin K Leung; Josephine Barnes; Gerard R Ridgway; Jonathan W Bartlett; Matthew J Clarkson; Kate Macdonald; Norbert Schuff; Nick C Fox; Sebastien Ourselin
Journal:  Neuroimage       Date:  2010-03-15       Impact factor: 6.556

8.  Mapping the evolution of regional atrophy in Alzheimer's disease: unbiased analysis of fluid-registered serial MRI.

Authors:  Rachael I Scahill; Jonathan M Schott; John M Stevens; Martin N Rossor; Nick C Fox
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-02       Impact factor: 11.205

9.  Automatic anatomical brain MRI segmentation combining label propagation and decision fusion.

Authors:  Rolf A Heckemann; Joseph V Hajnal; Paul Aljabar; Daniel Rueckert; Alexander Hammers
Journal:  Neuroimage       Date:  2006-07-24       Impact factor: 6.556

10.  Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration.

Authors:  Arno Klein; Jesper Andersson; Babak A Ardekani; John Ashburner; Brian Avants; Ming-Chang Chiang; Gary E Christensen; D Louis Collins; James Gee; Pierre Hellier; Joo Hyun Song; Mark Jenkinson; Claude Lepage; Daniel Rueckert; Paul Thompson; Tom Vercauteren; Roger P Woods; J John Mann; Ramin V Parsey
Journal:  Neuroimage       Date:  2009-01-13       Impact factor: 6.556

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  26 in total

1.  Local label learning (LLL) for subcortical structure segmentation: application to hippocampus segmentation.

Authors:  Yongfu Hao; Tianyao Wang; Xinqing Zhang; Yunyun Duan; Chunshui Yu; Tianzi Jiang; Yong Fan
Journal:  Hum Brain Mapp       Date:  2013-10-23       Impact factor: 5.038

2.  A logarithmic opinion pool based STAPLE algorithm for the fusion of segmentations with associated reliability weights.

Authors:  Alireza Akhondi-Asl; Lennox Hoyte; Mark E Lockhart; Simon K Warfield
Journal:  IEEE Trans Med Imaging       Date:  2014-06-12       Impact factor: 10.048

3.  MR image-based synthetic CT for IMRT prostate treatment planning and CBCT image-guided localization.

Authors:  Shupeng Chen; Hong Quan; An Qin; Seonghwan Yee; Di Yan
Journal:  J Appl Clin Med Phys       Date:  2016-05-08       Impact factor: 2.102

4.  Contour-Driven Atlas-Based Segmentation.

Authors:  Christian Wachinger; Karl Fritscher; Greg Sharp; Polina Golland
Journal:  IEEE Trans Med Imaging       Date:  2015-06-09       Impact factor: 10.048

5.  Nonlocal regularization for active appearance model: Application to medial temporal lobe segmentation.

Authors:  Shiyan Hu; Pierrick Coupé; Jens C Pruessner; D Louis Collins
Journal:  Hum Brain Mapp       Date:  2012-09-15       Impact factor: 5.038

6.  Estimation of the prior distribution of ground truth in the STAPLE algorithm: an empirical Bayesian approach.

Authors:  Alireza Akhondi-Asl; Simon K Warfield
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

7.  How Many Templates Does It Take for a Good Segmentation?: Error Analysis in Multiatlas Segmentation as a Function of Database Size.

Authors:  Suyash P Awate; Peihong Zhu; Ross T Whitaker
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

8.  Contour-driven regression for label inference in atlas-based segmentation.

Authors:  Christian Wachinger; Gregory C Sharp; Polina Golland
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

9.  DEPENDENCY PRIOR FOR MULTI-ATLAS LABEL FUSION.

Authors:  Hongzhi Wang; Paul A Yushkevich
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2012-12-31

10.  Robust multi-atlas label propagation by deep sparse representation.

Authors:  Chen Zu; Zhengxia Wang; Daoqiang Zhang; Peipeng Liang; Yonghong Shi; Dinggang Shen; Guorong Wu
Journal:  Pattern Recognit       Date:  2016-09-21       Impact factor: 7.740

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