Literature DB >> 22509017

Snapshot of virus evolution in hypersaline environments from the characterization of a membrane-containing Salisaeta icosahedral phage 1.

Antti P Aalto1, David Bitto, Janne J Ravantti, Dennis H Bamford, Juha T Huiskonen, Hanna M Oksanen.   

Abstract

The multitude of archaea and bacteria inhabiting extreme environments has only become evident during the last decades. As viruses apply a significant evolutionary force to their hosts, there is an inherent value in learning about viruses infecting these extremophiles. In this study, we have focused on one such unique virus-host pair isolated from a hypersaline environment: an icosahedral, membrane-containing double-stranded DNA virus--Salisaeta icosahedral phage 1 (SSIP-1) and its halophilic host bacterium Salisaeta sp. SP9-1 closely related to Salisaeta longa. The architectural principles, virion composition, and the proposed functions associated with some of the ORFs of the virus are surprisingly similar to those found in viruses belonging to the PRD1-adenovirus lineage. The virion structure, determined by electron cryomicroscopy, reveals that the bulk of the outer protein capsid is composed of upright standing pseudohexameric capsomers organized on a T = 49 icosahedral lattice. Our results give a comprehensive description of a halophilic virus-host system and shed light on the relatedness of viruses based on their virion architecture.

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Year:  2012        PMID: 22509017      PMCID: PMC3344969          DOI: 10.1073/pnas.1120174109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  43 in total

1.  EMAN: semiautomated software for high-resolution single-particle reconstructions.

Authors:  S J Ludtke; P R Baldwin; W Chiu
Journal:  J Struct Biol       Date:  1999-12-01       Impact factor: 2.867

2.  Global network of specific virus-host interactions in hypersaline environments.

Authors:  Nina S Atanasova; Elina Roine; Aharon Oren; Dennis H Bamford; Hanna M Oksanen
Journal:  Environ Microbiol       Date:  2011-10-17       Impact factor: 5.491

3.  SH1: A novel, spherical halovirus isolated from an Australian hypersaline lake.

Authors:  Kate Porter; Petra Kukkaro; Jaana K H Bamford; Carolyn Bath; Hanna M Kivelä; Mike L Dyall-Smith; Dennis H Bamford
Journal:  Virology       Date:  2005-04-25       Impact factor: 3.616

4.  Structural co-evolution of viruses and cells in the primordial world.

Authors:  Matti Jalasvuori; Jaana K H Bamford
Journal:  Orig Life Evol Biosph       Date:  2008-01-29       Impact factor: 1.950

Review 5.  Marine viruses--major players in the global ecosystem.

Authors:  Curtis A Suttle
Journal:  Nat Rev Microbiol       Date:  2007-10       Impact factor: 60.633

Review 6.  Phages across the biosphere: contrasts of viruses in soil and aquatic environments.

Authors:  Sharath Srinivasiah; Jaysheel Bhavsar; Kanika Thapar; Mark Liles; Tom Schoenfeld; K Eric Wommack
Journal:  Res Microbiol       Date:  2008-05-08       Impact factor: 3.992

7.  High abundance of viruses found in aquatic environments.

Authors:  O Bergh; K Y Børsheim; G Bratbak; M Heldal
Journal:  Nature       Date:  1989-08-10       Impact factor: 49.962

8.  HF1 and HF2: novel bacteriophages of halophilic archaea.

Authors:  S D Nuttall; M L Dyall-Smith
Journal:  Virology       Date:  1993-12       Impact factor: 3.616

9.  Salinibacter ruber gen. nov., sp. nov., a novel, extremely halophilic member of the Bacteria from saltern crystallizer ponds.

Authors:  Josefa Antón; Aharon Oren; Susana Benlloch; Francisco Rodríguez-Valera; Rudolf Amann; Ramón Rosselló-Mora
Journal:  Int J Syst Evol Microbiol       Date:  2002-03       Impact factor: 2.747

10.  The structure of a thermophilic archaeal virus shows a double-stranded DNA viral capsid type that spans all domains of life.

Authors:  George Rice; Liang Tang; Kenneth Stedman; Francisco Roberto; Josh Spuhler; Eric Gillitzer; John E Johnson; Trevor Douglas; Mark Young
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-03       Impact factor: 11.205

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  17 in total

1.  Phylogenomic network and comparative genomics reveal a diverged member of the ΦKZ-related group, marine vibrio phage ΦJM-2012.

Authors:  Ho Bin Jang; Fernand F Fagutao; Seong Won Nho; Seong Bin Park; In Seok Cha; Jong Earn Yu; Jung Seok Lee; Se Pyeong Im; Takashi Aoki; Tae Sung Jung
Journal:  J Virol       Date:  2013-09-25       Impact factor: 5.103

2.  The Isolation and Characterization of Kronos, a Novel Caulobacter Rhizosphere Phage that is Similar to Lambdoid Phages.

Authors:  Louis Berrios; Bert Ely
Journal:  Curr Microbiol       Date:  2019-02-27       Impact factor: 2.188

3.  Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by CryoEM and X-ray crystallography.

Authors:  David Veesler; Thiam-Seng Ng; Anoop K Sendamarai; Brian J Eilers; C Martin Lawrence; Shee-Mei Lok; Mark J Young; John E Johnson; Chi-yu Fu
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-21       Impact factor: 11.205

4.  Characterization of Helicobacter pylori bacteriophage KHP30.

Authors:  Jumpei Uchiyama; Hiroaki Takeuchi; Shin-ichiro Kato; Keiji Gamoh; Iyo Takemura-Uchiyama; Takako Ujihara; Masanori Daibata; Shigenobu Matsuzaki
Journal:  Appl Environ Microbiol       Date:  2013-03-08       Impact factor: 4.792

5.  Virus-Host Interactions and Genetic Diversity of Antarctic Sea Ice Bacteriophages.

Authors:  Tatiana A Demina; Anne-Mari Luhtanen; Simon Roux; Hanna M Oksanen
Journal:  mBio       Date:  2022-05-09       Impact factor: 7.786

6.  Salinity regulation of the interaction of halovirus SNJ1 with its host and alteration of the halovirus replication strategy to adapt to the variable ecosystem.

Authors:  Yunjun Mei; Congcong He; Yongchi Huang; Ying Liu; Ziqian Zhang; Xiangdong Chen; Ping Shen
Journal:  PLoS One       Date:  2015-04-08       Impact factor: 3.240

7.  Archaeal Haloarcula californiae Icosahedral Virus 1 Highlights Conserved Elements in Icosahedral Membrane-Containing DNA Viruses from Extreme Environments.

Authors:  Tatiana A Demina; Maija K Pietilä; Julija Svirskaitė; Janne J Ravantti; Nina S Atanasova; Dennis H Bamford; Hanna M Oksanen
Journal:  mBio       Date:  2016-07-19       Impact factor: 7.867

8.  Monitoring Physiological Changes in Haloarchaeal Cell during Virus Release.

Authors:  Julija Svirskaitė; Hanna M Oksanen; Rimantas Daugelavičius; Dennis H Bamford
Journal:  Viruses       Date:  2016-02-24       Impact factor: 5.048

9.  Mechanism of membranous tunnelling nanotube formation in viral genome delivery.

Authors:  Bibiana Peralta; David Gil-Carton; Daniel Castaño-Díez; Aurelie Bertin; Claire Boulogne; Hanna M Oksanen; Dennis H Bamford; Nicola G A Abrescia
Journal:  PLoS Biol       Date:  2013-09-24       Impact factor: 8.029

Review 10.  Adenosine triphosphatases of thermophilic archaeal double-stranded DNA viruses.

Authors:  Lotta J Happonen; Susanne Erdmann; Roger A Garrett; Sarah J Butcher
Journal:  Cell Biosci       Date:  2014-07-23       Impact factor: 7.133

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