Literature DB >> 2250649

Nucleotide sequence of the Ruminococcus albus SY3 endoglucanase genes celA and celB.

D M Poole1, G P Hazlewood, J I Laurie, P J Barker, H J Gilbert.   

Abstract

The complete nucleotide sequences of Ruminococcus albus genes celA and celB coding for endoglucanase A (EGA) and endoglucanase B (EGB), respectively, have been determined. The celA structural gene consists of an open reading frame of 1095 bp. Confirmation of the nucleotide sequence was obtained by comparing the predicted amino acid sequence with that derived by N-terminal analysis of purified EGA. The celB structural gene consists of an open reading frame of 1227 bp; 7 bp upstream of the translational start codon of celB is a typical gram-positive Shine-Dalgarno sequence. The deduced N-terminal region of EGB conforms to the general pattern for the signal peptides of secreted prokaryotic proteins. The complete celB gene, cloned into pUC vectors, caused lethality in Escherichia coli. In contrast, celA cloned in pUC18, under the control of lacZp, directed high-level synthesis of EGA in E. coli JM83. EGA in cell-free extract, purified to near homogeneity by ion-exchange chromatography, had a Mr of 44.5 kDa. Gene deletion and subcloning studies with celA revealed that EGA hydrolysed both CMC and xylan, and did not contain discrete functional domains. EGA and EGB showed considerable homology with each other, in addition to exhibiting similarity with Eg1 (R. albus), EGE (Clostridium thermocellum) and End (Butyrivibrio fibrisolvens).

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Year:  1990        PMID: 2250649     DOI: 10.1007/bf00265057

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  26 in total

1.  Molecular Cloning and Expression of Cellulase Genes from Ruminococcus albus 8 in Escherichia coli Bacteriophage lambda.

Authors:  G T Howard; B A White
Journal:  Appl Environ Microbiol       Date:  1988-07       Impact factor: 4.792

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3.  A rapid boiling method for the preparation of bacterial plasmids.

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4.  High-sensitivity sequencing with a gas-phase sequenator.

Authors:  M W Hunkapiller; R M Hewick; W J Dreyer; L E Hood
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

5.  Nucleotide sequence of the Erwinia chrysanthemi NCPPB 1066 L-asparaginase gene.

Authors:  N P Minton; H M Bullman; M D Scawen; T Atkinson; H J Gilbert
Journal:  Gene       Date:  1986       Impact factor: 3.688

6.  The third cellulase of alkalophilic Bacillus sp. strain N-4: evolutionary relationships within the cel gene family.

Authors:  F Fukumori; T Kudo; N Sashihara; Y Nagata; K Ito; K Horikoshi
Journal:  Gene       Date:  1989       Impact factor: 3.688

7.  Precise excision of the cellulose binding domains from two Cellulomonas fimi cellulases by a homologous protease and the effect on catalysis.

Authors:  N R Gilkes; R A Warren; R C Miller; D G Kilburn
Journal:  J Biol Chem       Date:  1988-07-25       Impact factor: 5.157

8.  The nucleotide sequence of a carboxymethylcellulase gene from Pseudomonas fluorescens subsp. cellulosa.

Authors:  J Hall; H J Gilbert
Journal:  Mol Gen Genet       Date:  1988-07

9.  Structure of a Ruminococcus albus endo-1,4-beta-glucanase gene.

Authors:  K Ohmiya; T Kajino; A Kato; S Shimizu
Journal:  J Bacteriol       Date:  1989-12       Impact factor: 3.490

10.  Preparation of the cellulase from the cellulolytic anaerobic rumen bacterium Ruminococcus albus and its release from the bacterial cell wall.

Authors:  T M Wood; C A Wilson; C S Stewart
Journal:  Biochem J       Date:  1982-07-01       Impact factor: 3.857

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  11 in total

1.  A classification of glycosyl hydrolases based on amino acid sequence similarities.

Authors:  B Henrissat
Journal:  Biochem J       Date:  1991-12-01       Impact factor: 3.857

Review 2.  Domains in microbial beta-1, 4-glycanases: sequence conservation, function, and enzyme families.

Authors:  N R Gilkes; B Henrissat; D G Kilburn; R C Miller; R A Warren
Journal:  Microbiol Rev       Date:  1991-06

3.  The resistance of cellulases and xylanases to proteolytic inactivation.

Authors:  C M Fontes; J Hall; B H Hirst; G P Hazlewood; H J Gilbert
Journal:  Appl Microbiol Biotechnol       Date:  1995-04       Impact factor: 4.813

4.  EndB, a multidomain family 44 cellulase from Ruminococcus flavefaciens 17, binds to cellulose via a novel cellulose-binding module and to another R. flavefaciens protein via a dockerin domain.

Authors:  M T Rincón; S I McCrae; J Kirby; K P Scott; H J Flint
Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

5.  Effect of short-chain acids on the carboxymethylcellulase activity of the ruminal bacterium Ruminococcus albus.

Authors:  R A Paggi; J P Fay
Journal:  Folia Microbiol (Praha)       Date:  2004       Impact factor: 2.099

6.  DNA sequence and transcription of an endoglucanase gene from Prevotella (Bacteroides) ruminicola AR20.

Authors:  P E Vercoe; K Gregg
Journal:  Mol Gen Genet       Date:  1992-05

7.  Intronless celB from the anaerobic fungus Neocallimastix patriciarum encodes a modular family A endoglucanase.

Authors:  L Zhou; G P Xue; C G Orpin; G W Black; H J Gilbert; G P Hazlewood
Journal:  Biochem J       Date:  1994-01-15       Impact factor: 3.857

8.  Direct isolation of functional genes encoding cellulases from the microbial consortia in a thermophilic, anaerobic digester maintained on lignocellulose.

Authors:  F G Healy; R M Ray; H C Aldrich; A C Wilkie; L O Ingram; K T Shanmugam
Journal:  Appl Microbiol Biotechnol       Date:  1995 Aug-Sep       Impact factor: 4.813

9.  Sequence of a cellulase gene from the rumen anaerobe Ruminococcus flavefaciens 17.

Authors:  C Cunningham; C A McPherson; J Martin; W J Harris; H J Flint
Journal:  Mol Gen Genet       Date:  1991-08

10.  Characterization of hybrid proteins consisting of the catalytic domains of Clostridium and Ruminococcus endoglucanases, fused to Pseudomonas non-catalytic cellulose-binding domains.

Authors:  D M Poole; A J Durrant; G P Hazlewood; H J Gilbert
Journal:  Biochem J       Date:  1991-11-01       Impact factor: 3.857

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