Literature DB >> 22484627

A genome-wide association meta-analysis identifies new childhood obesity loci.

Jonathan P Bradfield1, H Rob Taal, Nicholas J Timpson, André Scherag, Cecile Lecoeur, Nicole M Warrington, Elina Hypponen, Claus Holst, Beatriz Valcarcel, Elisabeth Thiering, Rany M Salem, Fredrick R Schumacher, Diana L Cousminer, Patrick M A Sleiman, Jianhua Zhao, Robert I Berkowitz, Karani S Vimaleswaran, Ivonne Jarick, Craig E Pennell, David M Evans, Beate St Pourcain, Diane J Berry, Dennis O Mook-Kanamori, Albert Hofman, Fernando Rivadeneira, André G Uitterlinden, Cornelia M van Duijn, Ralf J P van der Valk, Johan C de Jongste, Dirkje S Postma, Dorret I Boomsma, W James Gauderman, Mohamed T Hassanein, Cecilia M Lindgren, Reedik Mägi, Colin A G Boreham, Charlotte E Neville, Luis A Moreno, Paul Elliott, Anneli Pouta, Anna-Liisa Hartikainen, Mingyao Li, Olli Raitakari, Terho Lehtimäki, Johan G Eriksson, Aarno Palotie, Jean Dallongeville, Shikta Das, Panos Deloukas, George McMahon, Susan M Ring, John P Kemp, Jessica L Buxton, Alexandra I F Blakemore, Mariona Bustamante, Mònica Guxens, Joel N Hirschhorn, Matthew W Gillman, Eskil Kreiner-Møller, Hans Bisgaard, Frank D Gilliland, Joachim Heinrich, Eleanor Wheeler, Inês Barroso, Stephen O'Rahilly, Aline Meirhaeghe, Thorkild I A Sørensen, Chris Power, Lyle J Palmer, Anke Hinney, Elisabeth Widen, I Sadaf Farooqi, Mark I McCarthy, Philippe Froguel, David Meyre, Johannes Hebebrand, Marjo-Riitta Jarvelin, Vincent W V Jaddoe, George Davey Smith, Hakon Hakonarson, Struan F A Grant.   

Abstract

Multiple genetic variants have been associated with adult obesity and a few with severe obesity in childhood; however, less progress has been made in establishing genetic influences on common early-onset obesity. We performed a North American, Australian and European collaborative meta-analysis of 14 studies consisting of 5,530 cases (≥95th percentile of body mass index (BMI)) and 8,318 controls (<50th percentile of BMI) of European ancestry. Taking forward the eight newly discovered signals yielding association with P < 5 × 10(-6) in nine independent data sets (2,818 cases and 4,083 controls), we observed two loci that yielded genome-wide significant combined P values near OLFM4 at 13q14 (rs9568856; P = 1.82 × 10(-9); odds ratio (OR) = 1.22) and within HOXB5 at 17q21 (rs9299; P = 3.54 × 10(-9); OR = 1.14). Both loci continued to show association when two extreme childhood obesity cohorts were included (2,214 cases and 2,674 controls). These two loci also yielded directionally consistent associations in a previous meta-analysis of adult BMI(1).

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Year:  2012        PMID: 22484627      PMCID: PMC3370100          DOI: 10.1038/ng.2247

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  14 in total

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2.  Weight-for-stature compared with body mass index-for-age growth charts for the United States from the Centers for Disease Control and Prevention.

Authors:  Katherine M Flegal; Rong Wei; Cynthia Ogden
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Review 3.  Overweight in children and adolescents: pathophysiology, consequences, prevention, and treatment.

Authors:  Stephen R Daniels; Donna K Arnett; Robert H Eckel; Samuel S Gidding; Laura L Hayman; Shiriki Kumanyika; Thomas N Robinson; Barbara J Scott; Sachiko St Jeor; Christine L Williams
Journal:  Circulation       Date:  2005-04-19       Impact factor: 29.690

4.  Two new Loci for body-weight regulation identified in a joint analysis of genome-wide association studies for early-onset extreme obesity in French and german study groups.

Authors:  André Scherag; Christian Dina; Anke Hinney; Vincent Vatin; Susann Scherag; Carla I G Vogel; Timo D Müller; Harald Grallert; H-Erich Wichmann; Beverley Balkau; Barbara Heude; Marjo-Riitta Jarvelin; Anna-Liisa Hartikainen; Claire Levy-Marchal; Jacques Weill; Jérôme Delplanque; Antje Körner; Wieland Kiess; Peter Kovacs; Nigel W Rayner; Inga Prokopenko; Mark I McCarthy; Helmut Schäfer; Ivonne Jarick; Heiner Boeing; Eva Fisher; Thomas Reinehr; Joachim Heinrich; Peter Rzehak; Dietrich Berdel; Michael Borte; Heike Biebermann; Heiko Krude; Dieter Rosskopf; Christian Rimmbach; Winfried Rief; Tobias Fromme; Martin Klingenspor; Annette Schürmann; Nadja Schulz; Markus M Nöthen; Thomas W Mühleisen; Raimund Erbel; Karl-Heinz Jöckel; Susanne Moebus; Tanja Boes; Thomas Illig; Philippe Froguel; Johannes Hebebrand; David Meyre
Journal:  PLoS Genet       Date:  2010-04-22       Impact factor: 5.917

5.  The eradication of Helicobacter pylori is affected by body mass index (BMI).

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Journal:  Obes Surg       Date:  2008-04-29       Impact factor: 4.129

6.  The prevalence of Helicobacter pylori in obese subjects.

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Journal:  Eur J Intern Med       Date:  2009-08-27       Impact factor: 4.487

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8.  HOXB5 expression is spatially and temporarily regulated in human embryonic gut during neural crest cell colonization and differentiation of enteric neuroblasts.

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Journal:  Dev Dyn       Date:  2003-09       Impact factor: 3.780

9.  A common variant in the FTO gene is associated with body mass index and predisposes to childhood and adult obesity.

Authors:  Timothy M Frayling; Nicholas J Timpson; Michael N Weedon; Eleftheria Zeggini; Rachel M Freathy; Cecilia M Lindgren; John R B Perry; Katherine S Elliott; Hana Lango; Nigel W Rayner; Beverley Shields; Lorna W Harries; Jeffrey C Barrett; Sian Ellard; Christopher J Groves; Bridget Knight; Ann-Marie Patch; Andrew R Ness; Shah Ebrahim; Debbie A Lawlor; Susan M Ring; Yoav Ben-Shlomo; Marjo-Riitta Jarvelin; Ulla Sovio; Amanda J Bennett; David Melzer; Luigi Ferrucci; Ruth J F Loos; Inês Barroso; Nicholas J Wareham; Fredrik Karpe; Katharine R Owen; Lon R Cardon; Mark Walker; Graham A Hitman; Colin N A Palmer; Alex S F Doney; Andrew D Morris; George Davey Smith; Andrew T Hattersley; Mark I McCarthy
Journal:  Science       Date:  2007-04-12       Impact factor: 47.728

10.  Genetic susceptibility to obesity and related traits in childhood and adolescence: influence of loci identified by genome-wide association studies.

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Journal:  Diabetes       Date:  2010-08-19       Impact factor: 9.461

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Journal:  Diabetologia       Date:  2014-11-14       Impact factor: 10.122

2.  A genome-wide association study on common SNPs and rare CNVs in anorexia nervosa.

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5.  A genetic stochastic process model for genome-wide joint analysis of biomarker dynamics and disease susceptibility with longitudinal data.

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Journal:  Genet Epidemiol       Date:  2017-06-21       Impact factor: 2.135

6.  Beliefs about genetic influences on eating behaviors: Characteristics and associations with weight management confidence.

Authors:  Susan Persky; Sofia Bouhlal; Megan R Goldring; Colleen M McBride
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7.  Association Study of Three Gene Polymorphisms Recently Identified by a Genome-Wide Association Study with Obesity-Related Phenotypes in Chinese Children.

Authors:  Qi-Ying Song; Jie-Yun Song; Yang Wang; Shuo Wang; Yi-De Yang; Xiang-Rui Meng; Jun Ma; Hai-Jun Wang; Yan Wang
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8.  Deletion in the N-terminal half of olfactomedin 1 modifies its interaction with synaptic proteins and causes brain dystrophy and abnormal behavior in mice.

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Journal:  Exp Neurol       Date:  2013-10-02       Impact factor: 5.330

9.  A new system identification approach to identify genetic variants in sequencing studies for a binary phenotype.

Authors:  Guolian Kang; Wenjian Bi; Yanlong Zhao; Ji-Feng Zhang; Jun J Yang; Heng Xu; Mignon L Loh; Stephen P Hunger; Mary V Relling; Stanley Pounds; Cheng Cheng
Journal:  Hum Hered       Date:  2014-07-30       Impact factor: 0.444

10.  Adult adiposity susceptibility loci, early growth and general and abdominal fatness in childhood: the Generation R Study.

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