Literature DB >> 22482643

Concurrent segmentation of the prostate on MRI and CT via linked statistical shape models for radiotherapy planning.

Najeeb Chowdhury1, Robert Toth, Jonathan Chappelow, Sung Kim, Sabin Motwani, Salman Punekar, Haibo Lin, Stefan Both, Neha Vapiwala, Stephen Hahn, Anant Madabhushi.   

Abstract

PURPOSE: Prostate gland segmentation is a critical step in prostate radiotherapy planning, where dose plans are typically formulated on CT. Pretreatment MRI is now beginning to be acquired at several medical centers. Delineation of the prostate on MRI is acknowledged as being significantly simpler to perform, compared to delineation on CT. In this work, the authors present a novel framework for building a linked statistical shape model (LSSM), a statistical shape model (SSM) that links the shape variation of a structure of interest (SOI) across multiple imaging modalities. This framework is particularly relevant in scenarios where accurate boundary delineations of the SOI on one of the modalities may not be readily available, or difficult to obtain, for training a SSM. In this work the authors apply the LSSM in the context of multimodal prostate segmentation for radiotherapy planning, where the prostate is concurrently segmented on MRI and CT.
METHODS: The framework comprises a number of logically connected steps. The first step utilizes multimodal registration of MRI and CT to map 2D boundary delineations of the prostate from MRI onto corresponding CT images, for a set of training studies. Hence, the scheme obviates the need for expert delineations of the gland on CT for explicitly constructing a SSM for prostate segmentation on CT. The delineations of the prostate gland on MRI and CT allows for 3D reconstruction of the prostate shape which facilitates the building of the LSSM. In order to perform concurrent prostate MRI and CT segmentation using the LSSM, the authors employ a region-based level set approach where the authors deform the evolving prostate boundary to simultaneously fit to MRI and CT images in which voxels are classified to be either part of the prostate or outside the prostate. The classification is facilitated by using a combination of MRI-CT probabilistic spatial atlases and a random forest classifier, driven by gradient and Haar features.
RESULTS: The authors acquire a total of 20 MRI-CT patient studies and use the leave-one-out strategy to train and evaluate four different LSSMs. First, a fusion-based LSSM (fLSSM) is built using expert ground truth delineations of the prostate on MRI alone, where the ground truth for the gland on CT is obtained via coregistration of the corresponding MRI and CT slices. The authors compare the fLSSM against another LSSM (xLSSM), where expert delineations of the gland on both MRI and CT are employed in the model building; xLSSM representing the idealized LSSM. The authors also compare the fLSSM against an exclusive CT-based SSM (ctSSM), built from expert delineations of the gland on CT alone. In addition, two LSSMs trained using trainee delineations (tLSSM) on CT are compared with the fLSSM. The results indicate that the xLSSM, tLSSMs, and the fLSSM perform equivalently, all of them out-performing the ctSSM.
CONCLUSIONS: The fLSSM provides an accurate alternative to SSMs that require careful expert delineations of the SOI that may be difficult or laborious to obtain. Additionally, the fLSSM has the added benefit of providing concurrent segmentations of the SOI on multiple imaging modalities.

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Year:  2012        PMID: 22482643      PMCID: PMC3337664          DOI: 10.1118/1.3696376

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  31 in total

Review 1.  Radiologic anatomy of the prostate gland: a clinical approach.

Authors:  F V Coakley; H Hricak
Journal:  Radiol Clin North Am       Date:  2000-01       Impact factor: 2.303

2.  A magnetic resonance spectroscopy driven initialization scheme for active shape model based prostate segmentation.

Authors:  Robert Toth; Pallavi Tiwari; Mark Rosen; Galen Reed; John Kurhanewicz; Arjun Kalyanpur; Sona Pungavkar; Anant Madabhushi
Journal:  Med Image Anal       Date:  2010-10-28       Impact factor: 8.545

3.  Mutual information in coupled multi-shape model for medical image segmentation.

Authors:  A Tsai; W Wells; C Tempany; E Grimson; A Willsky
Journal:  Med Image Anal       Date:  2004-12       Impact factor: 8.545

4.  Prostate cancer: precision of integrating functional MR imaging with radiation therapy treatment by using fiducial gold markers.

Authors:  Henkjan J Huisman; Jurgen J Fütterer; Emile N J T van Lin; Arjan Welmers; Tom W J Scheenen; Jorn A van Dalen; Andries G Visser; J A Witjes; Jelle O Barentsz
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5.  Regional appearance in deformable model segmentation.

Authors:  Joshua V Stough; Robert E Broadhurst; Stephen M Pizer; Edward L Chaney
Journal:  Inf Process Med Imaging       Date:  2007

6.  Automatic initialization of an active shape model of the prostate.

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7.  Shape-based interpolation of multidimensional objects.

Authors:  S P Raya; J K Udupa
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8.  Modeling interaction for segmentation of neighboring structures.

Authors:  Pingkun Yan; Ashraf A Kassim; Weijia Shen; Mubarak Shah
Journal:  IEEE Trans Inf Technol Biomed       Date:  2009-01-20

9.  Automatic segmentation of the prostate in 3D MR images by atlas matching using localized mutual information.

Authors:  Stefan Klein; Uulke A van der Heide; Irene M Lips; Marco van Vulpen; Marius Staring; Josien P W Pluim
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10.  Radiographic and anatomic basis for prostate contouring errors and methods to improve prostate contouring accuracy.

Authors:  Patrick W McLaughlin; Cheryl Evans; Mary Feng; Vrinda Narayana
Journal:  Int J Radiat Oncol Biol Phys       Date:  2009-06-08       Impact factor: 7.038

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Review 4.  The role of texture analysis in imaging as an outcome predictor and potential tool in radiotherapy treatment planning.

Authors:  S Alobaidli; S McQuaid; C South; V Prakash; P Evans; A Nisbet
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5.  A New CT Prostate Segmentation for CT-Based HDR Brachytherapy.

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6.  Sparse patch-based label propagation for accurate prostate localization in CT images.

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Journal:  IEEE Trans Med Imaging       Date:  2012-11-27       Impact factor: 10.048

7.  Exploring the use of shape and texture descriptors of positron emission tomography tracer distribution in imaging studies of neurodegenerative disease.

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Review 8.  A review of substitute CT generation for MRI-only radiation therapy.

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Journal:  Radiat Oncol       Date:  2017-01-26       Impact factor: 3.481

9.  Automatic segmentation of pulmonary lobes on low-dose computed tomography using deep learning.

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