Literature DB >> 23204280

Sparse patch-based label propagation for accurate prostate localization in CT images.

Shu Liao1, Yaozong Gao, Jun Lian, Dinggang Shen.   

Abstract

In this paper, we propose a new prostate computed tomography (CT) segmentation method for image guided radiation therapy. The main contributions of our method lie in the following aspects. 1) Instead of using voxel intensity information alone, patch-based representation in the discriminative feature space with logistic sparse LASSO is used as anatomical signature to deal with low contrast problem in prostate CT images. 2) Based on the proposed patch-based signature, a new multi-atlases label fusion method formulated under sparse representation framework is designed to segment prostate in the new treatment images, with guidance from the previous segmented images of the same patient. This method estimates the prostate likelihood of each voxel in the new treatment image from its nearby candidate voxels in the previous segmented images, based on the nonlocal mean principle and sparsity constraint. 3) A hierarchical labeling strategy is further designed to perform label fusion, where voxels with high confidence are first labeled for providing useful context information in the same image for aiding the labeling of the remaining voxels. 4) An online update mechanism is finally adopted to progressively collect more patient-specific information from newly segmented treatment images of the same patient, for adaptive and more accurate segmentation. The proposed method has been extensively evaluated on a prostate CT image database consisting of 24 patients where each patient has more than 10 treatment images, and further compared with several state-of-the-art prostate CT segmentation algorithms using various evaluation metrics. Experimental results demonstrate that the proposed method consistently achieves higher segmentation accuracy than any other methods under comparison.

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Mesh:

Year:  2012        PMID: 23204280      PMCID: PMC3845245          DOI: 10.1109/TMI.2012.2230018

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  44 in total

1.  Improved optimization for the robust and accurate linear registration and motion correction of brain images.

Authors:  Mark Jenkinson; Peter Bannister; Michael Brady; Stephen Smith
Journal:  Neuroimage       Date:  2002-10       Impact factor: 6.556

2.  Segmentation of prostate boundaries from ultrasound images using statistical shape model.

Authors:  Dinggang Shen; Yiqiang Zhan; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2003-04       Impact factor: 10.048

3.  Simultaneous truth and performance level estimation (STAPLE): an algorithm for the validation of image segmentation.

Authors:  Simon K Warfield; Kelly H Zou; William M Wells
Journal:  IEEE Trans Med Imaging       Date:  2004-07       Impact factor: 10.048

4.  Model-based segmentation of medical imagery by matching distributions.

Authors:  Daniel Freedman; Richard J Radke; Tao Zhang; Yongwon Jeong; D Michael Lovelock; George T Y Chen
Journal:  IEEE Trans Med Imaging       Date:  2005-03       Impact factor: 10.048

5.  Implementation and validation of a three-dimensional deformable registration algorithm for targeted prostate cancer radiotherapy.

Authors:  He Wang; Lei Dong; Ming Fwu Lii; Andrew L Lee; Renaud de Crevoisier; Radhe Mohan; James D Cox; Deborah A Kuban; Rex Cheung
Journal:  Int J Radiat Oncol Biol Phys       Date:  2005-03-01       Impact factor: 7.038

6.  Prostate position relative to pelvic bony anatomy based on intraprostatic gold markers and electronic portal imaging.

Authors:  John M Schallenkamp; Michael G Herman; Jon J Kruse; Thomas M Pisansky
Journal:  Int J Radiat Oncol Biol Phys       Date:  2005-11-01       Impact factor: 7.038

7.  Large deformation three-dimensional image registration in image-guided radiation therapy.

Authors:  Mark Foskey; Brad Davis; Lav Goyal; Sha Chang; Ed Chaney; Nathalie Strehl; Sandrine Tomei; Julian Rosenman; Sarang Joshi
Journal:  Phys Med Biol       Date:  2005-12-06       Impact factor: 3.609

8.  Automatic segmentation of intra-treatment CT images for adaptive radiation therapy of the prostate.

Authors:  B C Davis; M Foskey; J Rosenman; L Goyal; S Chang; S Joshi
Journal:  Med Image Comput Comput Assist Interv       Date:  2005

9.  Deformable segmentation of 3-D ultrasound prostate images using statistical texture matching method.

Authors:  Yiqiang Zhan; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2006-03       Impact factor: 10.048

10.  Automatic localization of the prostate for on-line or off-line image-guided radiotherapy.

Authors:  Monique H P Smitsmans; Jochem W H Wolthaus; Xavier Artignan; Josien de Bois; David A Jaffray; Joos V Lebesque; Marcel van Herk
Journal:  Int J Radiat Oncol Biol Phys       Date:  2004-10-01       Impact factor: 7.038

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  31 in total

1.  Accurate Segmentation of CT Male Pelvic Organs via Regression-Based Deformable Models and Multi-Task Random Forests.

Authors:  Yaozong Gao; Yeqin Shao; Jun Lian; Andrew Z Wang; Ronald C Chen; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2016-01-18       Impact factor: 10.048

2.  A semiautomatic approach for prostate segmentation in MR images using local texture classification and statistical shape modeling.

Authors:  Maysam Shahedi; Martin Halicek; Qinmei Li; Lizhi Liu; Zhenfeng Zhang; Sadhna Verma; David M Schuster; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2019-03-08

3.  Metric Learning for Multi-atlas based Segmentation of Hippocampus.

Authors:  Hancan Zhu; Hewei Cheng; Xuesong Yang; Yong Fan
Journal:  Neuroinformatics       Date:  2017-01

4.  Prostate CT segmentation method based on nonrigid registration in ultrasound-guided CT-based HDR prostate brachytherapy.

Authors:  Xiaofeng Yang; Peter Rossi; Tomi Ogunleye; David M Marcus; Ashesh B Jani; Hui Mao; Walter J Curran; Tian Liu
Journal:  Med Phys       Date:  2014-11       Impact factor: 4.071

5.  Interactive prostate segmentation using atlas-guided semi-supervised learning and adaptive feature selection.

Authors:  Sang Hyun Park; Yaozong Gao; Yinghuan Shi; Dinggang Shen
Journal:  Med Phys       Date:  2014-11       Impact factor: 4.071

6.  CT male pelvic organ segmentation using fully convolutional networks with boundary sensitive representation.

Authors:  Shuai Wang; Kelei He; Dong Nie; Sihang Zhou; Yaozong Gao; Dinggang Shen
Journal:  Med Image Anal       Date:  2019-03-21       Impact factor: 8.545

7.  Online updating of context-aware landmark detectors for prostate localization in daily treatment CT images.

Authors:  Xiubin Dai; Yaozong Gao; Dinggang Shen
Journal:  Med Phys       Date:  2015-05       Impact factor: 4.071

8.  Segmenting hippocampus from infant brains by sparse patch matching with deep-learned features.

Authors:  Yanrong Guo; Guorong Wu; Leah A Commander; Stephanie Szary; Valerie Jewells; Weili Lin; Dinggang Shent
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

9.  Deeply supervised 3D fully convolutional networks with group dilated convolution for automatic MRI prostate segmentation.

Authors:  Bo Wang; Yang Lei; Sibo Tian; Tonghe Wang; Yingzi Liu; Pretesh Patel; Ashesh B Jani; Hui Mao; Walter J Curran; Tian Liu; Xiaofeng Yang
Journal:  Med Phys       Date:  2019-02-19       Impact factor: 4.071

10.  Integration of sparse multi-modality representation and anatomical constraint for isointense infant brain MR image segmentation.

Authors:  Li Wang; Feng Shi; Yaozong Gao; Gang Li; John H Gilmore; Weili Lin; Dinggang Shen
Journal:  Neuroimage       Date:  2013-11-28       Impact factor: 6.556

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