Literature DB >> 22464915

An exonuclease III and graphene oxide-aided assay for DNA detection.

Lu Peng1, Zhi Zhu1, Yan Chen1, Da Han1, Weihong Tan2.   

Abstract

We have developed a novel DNA assay based on exonuclease III (ExoIII)-induced target recycling and the fluorescence quenching ability of graphene oxide (GO). This assay consists of a linear DNA probe labeled with a fluorophore in the middle. Introduction of target sequence induces the exonuclease III catalyzed probe digestion and generation of single nucleotides. After each cycle of digestion, the target is recycled to realize the amplification. Finally, graphene oxide is added to quench the remaining probes and the signal from the resulting fluorophore labeled single nucleotides is detected. With this approach, a sub-picomolar detection limit can be achieved within 40 min at 37°C. The method was successfully applied to multicolor DNA detection and the analysis of telomerase activity in extracts from cancer cells.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 22464915      PMCID: PMC3794672          DOI: 10.1016/j.bios.2012.03.002

Source DB:  PubMed          Journal:  Biosens Bioelectron        ISSN: 0956-5663            Impact factor:   10.618


  26 in total

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Authors:  M Hirose; J Abe-Hashimoto; K Ogura; H Tahara; T Ide; T Yoshimura
Journal:  J Cancer Res Clin Oncol       Date:  1997       Impact factor: 4.553

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Journal:  Angew Chem Int Ed Engl       Date:  2010-09-03       Impact factor: 15.336

3.  Ultrasensitive and selective colorimetric DNA detection by nicking endonuclease assisted nanoparticle amplification.

Authors:  Wei Xu; Xuejia Xue; Tianhu Li; Huaqiang Zeng; Xiaogang Liu
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

4.  Sensitive and selective amplified fluorescence DNA detection based on exonuclease III-aided target recycling.

Authors:  Xiaolei Zuo; Fan Xia; Yi Xiao; Kevin W Plaxco
Journal:  J Am Chem Soc       Date:  2010-02-17       Impact factor: 15.419

5.  Gold-nanoparticle-based multicolor nanobeacons for sequence-specific DNA analysis.

Authors:  Shiping Song; Zhiqiang Liang; Juan Zhang; Lihua Wang; Genxi Li; Chunhai Fan
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

6.  Molecular beacons: probes that fluoresce upon hybridization.

Authors:  S Tyagi; F R Kramer
Journal:  Nat Biotechnol       Date:  1996-03       Impact factor: 54.908

7.  Real time quantitative PCR.

Authors:  C A Heid; J Stevens; K J Livak; P M Williams
Journal:  Genome Res       Date:  1996-10       Impact factor: 9.043

8.  A rapid method for semiquantitative analysis of the human V beta-repertoire using TaqManR PCR.

Authors:  R Lang; K Pfeffer; H Wagner; K Heeg
Journal:  J Immunol Methods       Date:  1997-04-25       Impact factor: 2.303

Review 9.  Advances in quantitative PCR technology: 5' nuclease assays.

Authors:  Y S Lie; C J Petropoulos
Journal:  Curr Opin Biotechnol       Date:  1998-02       Impact factor: 9.740

10.  Fluorescence detection of single-nucleotide polymorphisms with a single, self-complementary, triple-stem DNA probe.

Authors:  Yi Xiao; Kory J I Plakos; Xinhui Lou; Ryan J White; Jiangrong Qian; Kevin W Plaxco; H Tom Soh
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

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  4 in total

1.  Fluorometric determination of mercury(II) via a graphene oxide-based assay using exonuclease III-assisted signal amplification and thymidine-Hg(II)-thymidine interaction.

Authors:  Yi Ning; Jue Hu; Ke Wei; Guliang He; Tao Wu; Fangguo Lu
Journal:  Mikrochim Acta       Date:  2019-03-05       Impact factor: 5.833

Review 2.  Advances in the detection of telomerase activity using isothermal amplification.

Authors:  Xiaojin Zhang; Xiaoding Lou; Fan Xia
Journal:  Theranostics       Date:  2017-04-10       Impact factor: 11.556

Review 3.  Biosensors based on graphene oxide and its biomedical application.

Authors:  Jieon Lee; Jungho Kim; Seongchan Kim; Dal-Hee Min
Journal:  Adv Drug Deliv Rev       Date:  2016-06-11       Impact factor: 15.470

Review 4.  Recent advances in graphene-based biosensor technology with applications in life sciences.

Authors:  Janire Peña-Bahamonde; Hang N Nguyen; Sofia K Fanourakis; Debora F Rodrigues
Journal:  J Nanobiotechnology       Date:  2018-09-22       Impact factor: 10.435

  4 in total

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