Literature DB >> 9503586

Advances in quantitative PCR technology: 5' nuclease assays.

Y S Lie1, C J Petropoulos.   

Abstract

The development of 5' nuclease assays represents a significant advance in nucleic acid quantitation. This approach utilizes the 5'-3' exonuclease activity of Thermus aquaticus (Taq) polymerase to cleave a dual-labelled probe annealed to a target sequence during amplification. The release of a fluorogenic tag from the 5' end of the probe is proportional to the target sequence concentration (copy number), and can be measured either at endpoint (post-amplification), or in real time', where the increase in emission intensity is followed on a per-cycle basis.

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Year:  1998        PMID: 9503586     DOI: 10.1016/s0958-1669(98)80082-7

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  46 in total

1.  Vitamin D hormone confers neuroprotection in parallel with downregulation of L-type calcium channel expression in hippocampal neurons.

Authors:  L D Brewer; V Thibault; K C Chen; M C Langub; P W Landfield; N M Porter
Journal:  J Neurosci       Date:  2001-01-01       Impact factor: 6.167

2.  Quantitative mRNA expression analysis from formalin-fixed, paraffin-embedded tissues using 5' nuclease quantitative reverse transcription-polymerase chain reaction.

Authors:  T E Godfrey; S H Kim; M Chavira; D W Ruff; R S Warren; J W Gray; R H Jensen
Journal:  J Mol Diagn       Date:  2000-05       Impact factor: 5.568

3.  Rapid detection and quantification of members of the archaeal community by quantitative PCR using fluorogenic probes.

Authors:  K Takai; K Horikoshi
Journal:  Appl Environ Microbiol       Date:  2000-11       Impact factor: 4.792

4.  Homogeneous assays based on deoxyribozyme catalysis.

Authors:  M N Stojanovic; P de Prada; D W Landry
Journal:  Nucleic Acids Res       Date:  2000-08-01       Impact factor: 16.971

5.  Replication of phenotypically mixed human immunodeficiency virus type 1 virions containing catalytically active and catalytically inactive reverse transcriptase.

Authors:  J G Julias; A L Ferris; P L Boyer; S H Hughes
Journal:  J Virol       Date:  2001-07       Impact factor: 5.103

6.  BADGE, Beads Array for the Detection of Gene Expression, a high-throughput diagnostic bioassay.

Authors:  L Yang; D K Tran; X Wang
Journal:  Genome Res       Date:  2001-11       Impact factor: 9.043

7.  Application of the 5' fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments.

Authors:  J R Stults; O Snoeyenbos-West; B Methe; D R Lovley; D P Chandler
Journal:  Appl Environ Microbiol       Date:  2001-06       Impact factor: 4.792

8.  The effects of sequence length and oligonucleotide mismatches on 5' exonuclease assay efficiency.

Authors:  Steve Smith; Linda Vigilant; Phillip A Morin
Journal:  Nucleic Acids Res       Date:  2002-10-15       Impact factor: 16.971

9.  Improved quantitative real-time RT-PCR for expression profiling of individual cells.

Authors:  Birgit Liss
Journal:  Nucleic Acids Res       Date:  2002-09-01       Impact factor: 16.971

10.  Induction of antigen-specific regulatory T cells following overexpression of a Notch ligand by human B lymphocytes.

Authors:  Stéphane Vigouroux; Eric Yvon; Hans-Joachim Wagner; Ettore Biagi; Gianpietro Dotti; Uluhan Sili; Cecilia Lira; Cliona M Rooney; Malcolm K Brenner
Journal:  J Virol       Date:  2003-10       Impact factor: 5.103

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