Literature DB >> 22450298

Characteristics and variability of structural networks derived from diffusion tensor imaging.

Hu Cheng1, Yang Wang, Jinhua Sheng, William G Kronenberger, Vincent P Mathews, Tom A Hummer, Andrew J Saykin.   

Abstract

Structural brain networks were constructed based on diffusion tensor imaging (DTI) data of 59 young healthy male adults. The networks had 68 nodes, derived from FreeSurfer parcellation of the cortical surface. By means of streamline tractography, the edge weight was defined as the number of streamlines between two nodes normalized by their mean volume. Specifically, two weighting schemes were adopted by considering various biases from fiber tracking. The weighting schemes were tested for possible bias toward the physical size of the nodes. A novel thresholding method was proposed using the variance of number of streamlines in fiber tracking. The backbone networks were extracted and various network analyses were applied to investigate the features of the binary and weighted backbone networks. For weighted networks, a high correlation was observed between nodal strength and betweenness centrality. Despite similar small-worldness features, binary networks and weighted networks are distinctive in many aspects, such as modularity and nodal betweenness centrality. Inter-subject variability was examined for the weighted networks, along with the test-retest reliability from two repeated scans on 44 of the 59 subjects. The inter-/intra-subject variability of weighted networks was discussed in three levels - edge weights, local metrics, and global metrics. The variance of edge weights can be very large. Although local metrics show less variability than the edge weights, they still have considerable amounts of variability. Weighting scheme one, which scales the number of streamlines by their lengths, demonstrates stable intra-class correlation coefficients against thresholding for global efficiency, clustering coefficient and diversity. The intra-class correlation analysis suggests the current approach of constructing weighted network has a reasonably high reproducibility for most global metrics.
Copyright © 2012 Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Year:  2012        PMID: 22450298      PMCID: PMC3500617          DOI: 10.1016/j.neuroimage.2012.03.036

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  25 in total

1.  Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-subject brain.

Authors:  N Tzourio-Mazoyer; B Landeau; D Papathanassiou; F Crivello; O Etard; N Delcroix; B Mazoyer; M Joliot
Journal:  Neuroimage       Date:  2002-01       Impact factor: 6.556

2.  Anisotropy in high angular resolution diffusion-weighted MRI.

Authors:  L R Frank
Journal:  Magn Reson Med       Date:  2001-06       Impact factor: 4.668

3.  Network centrality in the human functional connectome.

Authors:  Xi-Nian Zuo; Ross Ehmke; Maarten Mennes; Davide Imperati; F Xavier Castellanos; Olaf Sporns; Michael P Milham
Journal:  Cereb Cortex       Date:  2011-10-02       Impact factor: 5.357

4.  An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest.

Authors:  Rahul S Desikan; Florent Ségonne; Bruce Fischl; Brian T Quinn; Bradford C Dickerson; Deborah Blacker; Randy L Buckner; Anders M Dale; R Paul Maguire; Bradley T Hyman; Marilyn S Albert; Ronald J Killiany
Journal:  Neuroimage       Date:  2006-03-10       Impact factor: 6.556

5.  Functionally linked resting-state networks reflect the underlying structural connectivity architecture of the human brain.

Authors:  Martijn P van den Heuvel; René C W Mandl; René S Kahn; Hilleke E Hulshoff Pol
Journal:  Hum Brain Mapp       Date:  2009-10       Impact factor: 5.038

6.  Predicting human resting-state functional connectivity from structural connectivity.

Authors:  C J Honey; O Sporns; L Cammoun; X Gigandet; J P Thiran; R Meuli; P Hagmann
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-02       Impact factor: 11.205

7.  Mapping anatomical connectivity patterns of human cerebral cortex using in vivo diffusion tensor imaging tractography.

Authors:  Gaolang Gong; Yong He; Luis Concha; Catherine Lebel; Donald W Gross; Alan C Evans; Christian Beaulieu
Journal:  Cereb Cortex       Date:  2008-06-20       Impact factor: 5.357

8.  Diffusion spectrum magnetic resonance imaging (DSI) tractography of crossing fibers.

Authors:  V J Wedeen; R P Wang; J D Schmahmann; T Benner; W Y I Tseng; G Dai; D N Pandya; P Hagmann; H D'Arceuil; A J de Crespigny
Journal:  Neuroimage       Date:  2008-04-08       Impact factor: 6.556

9.  Mapping the structural core of human cerebral cortex.

Authors:  Patric Hagmann; Leila Cammoun; Xavier Gigandet; Reto Meuli; Christopher J Honey; Van J Wedeen; Olaf Sporns
Journal:  PLoS Biol       Date:  2008-07-01       Impact factor: 8.029

10.  Mapping human whole-brain structural networks with diffusion MRI.

Authors:  Patric Hagmann; Maciej Kurant; Xavier Gigandet; Patrick Thiran; Van J Wedeen; Reto Meuli; Jean-Philippe Thiran
Journal:  PLoS One       Date:  2007-07-04       Impact factor: 3.240

View more
  54 in total

Review 1.  Reproducibility of graph-theoretic brain network metrics: a systematic review.

Authors:  Thomas Welton; Daniel A Kent; Dorothee P Auer; Robert A Dineen
Journal:  Brain Connect       Date:  2015-01-09

2.  Convergence and divergence across construction methods for human brain white matter networks: an assessment based on individual differences.

Authors:  Suyu Zhong; Yong He; Gaolang Gong
Journal:  Hum Brain Mapp       Date:  2015-01-30       Impact factor: 5.038

3.  Real-time strategy video game experience and structural connectivity - A diffusion tensor imaging study.

Authors:  Natalia Kowalczyk; Feng Shi; Mikolaj Magnuski; Maciek Skorko; Pawel Dobrowolski; Bartosz Kossowski; Artur Marchewka; Maksymilian Bielecki; Malgorzata Kossut; Aneta Brzezicka
Journal:  Hum Brain Mapp       Date:  2018-06-20       Impact factor: 5.038

4.  Quantification of structural brain connectivity via a conductance model.

Authors:  Aina Frau-Pascual; Morgan Fogarty; Bruce Fischl; Anastasia Yendiki; Iman Aganj
Journal:  Neuroimage       Date:  2019-01-21       Impact factor: 6.556

5.  Hemispheric lateralization of topological organization in structural brain networks.

Authors:  Karen Caeyenberghs; Alexander Leemans
Journal:  Hum Brain Mapp       Date:  2014-04-07       Impact factor: 5.038

6.  Altered whole-brain connectivity in albinism.

Authors:  Thomas Welton; Sarim Ather; Frank A Proudlock; Irene Gottlob; Robert A Dineen
Journal:  Hum Brain Mapp       Date:  2016-09-29       Impact factor: 5.038

7.  The open diffusion data derivatives, brain data upcycling via integrated publishing of derivatives and reproducible open cloud services.

Authors:  Paolo Avesani; Brent McPherson; Soichi Hayashi; Cesar F Caiafa; Robert Henschel; Eleftherios Garyfallidis; Lindsey Kitchell; Daniel Bullock; Andrew Patterson; Emanuele Olivetti; Olaf Sporns; Andrew J Saykin; Lei Wang; Ivo Dinov; David Hancock; Bradley Caron; Yiming Qian; Franco Pestilli
Journal:  Sci Data       Date:  2019-05-23       Impact factor: 6.444

8.  Constrained Spherical Deconvolution Tractography Reveals Cerebello-Mammillary Connections in Humans.

Authors:  Alberto Cacciola; Demetrio Milardi; Alessandro Calamuneri; Lilla Bonanno; Silvia Marino; Pietro Ciolli; Margherita Russo; Daniele Bruschetta; Antonio Duca; Fabio Trimarchi; Angelo Quartarone; Giuseppe Anastasi
Journal:  Cerebellum       Date:  2017-04       Impact factor: 3.847

9.  Test-retest reliability of computational network measurements derived from the structural connectome of the human brain.

Authors:  Julia P Owen; Etay Ziv; Polina Bukshpun; Nicholas Pojman; Mari Wakahiro; Jeffrey I Berman; Timothy P L Roberts; Eric J Friedman; Elliott H Sherr; Pratik Mukherjee
Journal:  Brain Connect       Date:  2013

10.  Nonparametric Bayes Models of Fiber Curves Connecting Brain Regions.

Authors:  Zhengwu Zhang; Maxime Descoteaux; David B Dunson
Journal:  J Am Stat Assoc       Date:  2019-04-30       Impact factor: 5.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.