Literature DB >> 23350832

Test-retest reliability of computational network measurements derived from the structural connectome of the human brain.

Julia P Owen1, Etay Ziv, Polina Bukshpun, Nicholas Pojman, Mari Wakahiro, Jeffrey I Berman, Timothy P L Roberts, Eric J Friedman, Elliott H Sherr, Pratik Mukherjee.   

Abstract

Structural magnetic resonance (MR) connectomics holds promise for the diagnosis, outcome prediction, and treatment monitoring of many common neurodevelopmental, psychiatric, and neurodegenerative disorders for which there is currently no clinical utility for MR imaging (MRI). Before computational network metrics from the human connectome can be applied in a clinical setting, their precision and their normative intersubject variation must be understood to guide the study design and the interpretation of longitudinal data. In this work, the reproducibility of commonly used graph theoretic measures is investigated, as applied to the structural connectome of healthy adult volunteers. Two datasets are examined, one consisting of 10 subjects scanned twice at one MRI facility and one consisting of five subjects scanned once each at two different facilities using the same imaging platform. Global graph metrics are calculated for unweighed and weighed connectomes, and two levels of granularity of the connectome are evaluated: one based on the 82-node cortical and subcortical parcellation from FreeSurfer and one based on an atlas-free parcellation of the gray-white matter boundary consisting of 1000 cortical nodes. The consistency of the unweighed and weighed edges and the module assignments are also computed for the 82-node connectomes. Overall, the results demonstrate good-to-excellent test-retest reliability for the entire connectome-processing pipeline, including the graph analytics, in both the intrasite and intersite datasets. These findings indicate that measurements of computational network metrics derived from the structural connectome have sufficient precision to be tested as potential biomarkers for diagnosis, prognosis, and monitoring of interventions in neurological and psychiatric diseases.

Entities:  

Mesh:

Year:  2013        PMID: 23350832      PMCID: PMC3634151          DOI: 10.1089/brain.2012.0121

Source DB:  PubMed          Journal:  Brain Connect        ISSN: 2158-0014


  43 in total

1.  Improved optimization for the robust and accurate linear registration and motion correction of brain images.

Authors:  Mark Jenkinson; Peter Bannister; Michael Brady; Stephen Smith
Journal:  Neuroimage       Date:  2002-10       Impact factor: 6.556

2.  Replicability of diffusion tensor imaging measurements of fractional anisotropy and trace in brain.

Authors:  Adolf Pfefferbaum; Elfar Adalsteinsson; Edith V Sullivan
Journal:  J Magn Reson Imaging       Date:  2003-10       Impact factor: 4.813

3.  Rich-club organization of the human connectome.

Authors:  Martijn P van den Heuvel; Olaf Sporns
Journal:  J Neurosci       Date:  2011-11-02       Impact factor: 6.167

4.  Mapping the human connectome at multiple scales with diffusion spectrum MRI.

Authors:  Leila Cammoun; Xavier Gigandet; Djalel Meskaldji; Jean Philippe Thiran; Olaf Sporns; Kim Q Do; Philippe Maeder; Reto Meuli; Patric Hagmann
Journal:  J Neurosci Methods       Date:  2011-10-06       Impact factor: 2.390

5.  The effect and reproducibility of different clinical DTI gradient sets on small world brain connectivity measures.

Authors:  M J Vaessen; P A M Hofman; H N Tijssen; A P Aldenkamp; J F A Jansen; W H Backes
Journal:  Neuroimage       Date:  2010-03-11       Impact factor: 6.556

6.  An integrated framework for high angular resolution diffusion imaging-based investigation of structural connectivity.

Authors:  Luke Bloy; Madhura Ingalhalikar; Nematollah K Batmanghelich; Robert T Schultz; Timothy P L Roberts; Ragini Verma
Journal:  Brain Connect       Date:  2012-06-11

7.  Disrupted topological organization in white matter structural networks in amnestic mild cognitive impairment: relationship to subtype.

Authors:  Ni Shu; Ying Liang; He Li; Junying Zhang; Xin Li; Liang Wang; Yong He; Yongyan Wang; Zhanjun Zhang
Journal:  Radiology       Date:  2012-09-14       Impact factor: 11.105

8.  Between session reproducibility and between subject variability of diffusion MR and tractography measures.

Authors:  E Heiervang; T E J Behrens; C E Mackay; M D Robson; H Johansen-Berg
Journal:  Neuroimage       Date:  2006-09-26       Impact factor: 6.556

9.  Identical, but not the same: intra-site and inter-site reproducibility of fractional anisotropy measures on two 3.0T scanners.

Authors:  Christian Vollmar; Jonathan O'Muircheartaigh; Gareth J Barker; Mark R Symms; Pamela Thompson; Veena Kumari; John S Duncan; Mark P Richardson; Matthias J Koepp
Journal:  Neuroimage       Date:  2010-03-23       Impact factor: 6.556

10.  MR connectomics: a conceptual framework for studying the developing brain.

Authors:  Patric Hagmann; Patricia E Grant; Damien A Fair
Journal:  Front Syst Neurosci       Date:  2012-06-13
View more
  35 in total

1.  Resting-state networks and the functional connectome of the human brain in agenesis of the corpus callosum.

Authors:  Julia P Owen; Yi-Ou Li; Fanpei G Yang; Charvi Shetty; Polina Bukshpun; Shivani Vora; Mari Wakahiro; Leighton B N Hinkley; Srikantan S Nagarajan; Elliott H Sherr; Pratik Mukherjee
Journal:  Brain Connect       Date:  2013-11-16

Review 2.  Reproducibility of graph-theoretic brain network metrics: a systematic review.

Authors:  Thomas Welton; Daniel A Kent; Dorothee P Auer; Robert A Dineen
Journal:  Brain Connect       Date:  2015-01-09

3.  Edge density imaging: mapping the anatomic embedding of the structural connectome within the white matter of the human brain.

Authors:  Julia P Owen; Yi Shin Chang; Pratik Mukherjee
Journal:  Neuroimage       Date:  2015-01-12       Impact factor: 6.556

4.  Convergence and divergence across construction methods for human brain white matter networks: an assessment based on individual differences.

Authors:  Suyu Zhong; Yong He; Gaolang Gong
Journal:  Hum Brain Mapp       Date:  2015-01-30       Impact factor: 5.038

5.  Stochastic geometric network models for groups of functional and structural connectomes.

Authors:  Eric J Friedman; Adam S Landsberg; Julia P Owen; Yi-Ou Li; Pratik Mukherjee
Journal:  Neuroimage       Date:  2014-07-25       Impact factor: 6.556

6.  Altered whole-brain connectivity in albinism.

Authors:  Thomas Welton; Sarim Ather; Frank A Proudlock; Irene Gottlob; Robert A Dineen
Journal:  Hum Brain Mapp       Date:  2016-09-29       Impact factor: 5.038

7.  Connectomic consistency: a systematic stability analysis of structural and functional connectivity.

Authors:  Yusuf Osmanlıoğlu; Jacob A Alappatt; Drew Parker; Ragini Verma
Journal:  J Neural Eng       Date:  2020-07-13       Impact factor: 5.379

8.  Test-retest reliability of high angular resolution diffusion imaging acquisition within medial temporal lobe connections assessed via tract based spatial statistics, probabilistic tractography and a novel graph theory metric.

Authors:  T Kuhn; J M Gullett; P Nguyen; A E Boutzoukas; A Ford; L M Colon-Perez; W Triplett; P R Carney; T H Mareci; C C Price; R M Bauer
Journal:  Brain Imaging Behav       Date:  2016-06       Impact factor: 3.978

9.  Analysis of Consistency in Structural and Functional Connectivity of Human Brain.

Authors:  Yusuf Osmanlıoğlu; Jacob A Alappatt; Drew Parker; Ragini Verma
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2020-05-22

10.  Relationship between M100 Auditory Evoked Response and Auditory Radiation Microstructure in 16p11.2 Deletion and Duplication Carriers.

Authors:  J I Berman; D Chudnovskaya; L Blaskey; E Kuschner; P Mukherjee; R Buckner; S Nagarajan; W K Chung; E H Sherr; T P L Roberts
Journal:  AJNR Am J Neuroradiol       Date:  2016-02-11       Impact factor: 3.825

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.