Literature DB >> 25490902

Reproducibility of graph-theoretic brain network metrics: a systematic review.

Thomas Welton1, Daniel A Kent, Dorothee P Auer, Robert A Dineen.   

Abstract

This systematic review aimed to assess the reproducibility of graph-theoretic brain network metrics. Primary research studies of test-retest reliability conducted on healthy human subjects were included that quantified test-retest reliability using either the intraclass correlation coefficient (ICC) or the coefficient of variance. The MEDLINE, Web of Knowledge, Google Scholar, and OpenGrey databases were searched up to February 2014. Risk of bias was assessed with 10 criteria weighted toward methodological quality. Twenty-three studies were included in the review (n=499 subjects) and evaluated for various characteristics, including sample size (5-45), retest interval (<1 h to >1 year), acquisition method, and test-retest reliability scores. For at least one metric, ICCs reached the fair range (ICC 0.40-0.59) in one study, the good range (ICC 0.60-0.74) in five studies, and the excellent range (ICC>0.74) in 16 studies. Heterogeneity of methods prevented further quantitative analysis. Reproducibility was good overall. For the metrics having three or more ICCs reported for both functional and structural networks, six of seven were higher in structural networks, indicating that structural networks may be more reliable over time. The authors were also able to highlight and discuss a number of methodological factors affecting reproducibility.

Entities:  

Keywords:  connectome; graph theory; network; reliability; reproducibility; systematic review; test-retest

Mesh:

Year:  2015        PMID: 25490902      PMCID: PMC4432917          DOI: 10.1089/brain.2014.0313

Source DB:  PubMed          Journal:  Brain Connect        ISSN: 2158-0014


  54 in total

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2.  Effect of resting-state functional MR imaging duration on stability of graph theory metrics of brain network connectivity.

Authors:  Christopher T Whitlow; Ramon Casanova; Joseph A Maldjian
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4.  Test-retest reliability of resting-state connectivity network characteristics using fMRI and graph theoretical measures.

Authors:  Urs Braun; Michael M Plichta; Christine Esslinger; Carina Sauer; Leila Haddad; Oliver Grimm; Daniela Mier; Sebastian Mohnke; Andreas Heinz; Susanne Erk; Henrik Walter; Nina Seiferth; Peter Kirsch; Andreas Meyer-Lindenberg
Journal:  Neuroimage       Date:  2011-08-23       Impact factor: 6.556

5.  Functional connectivity hubs in the human brain.

Authors:  Dardo Tomasi; Nora D Volkow
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6.  Are brain networks stable during a 24-hour period?

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Journal:  Neuroimage       Date:  2011-07-23       Impact factor: 6.556

7.  Repeatability analysis of global and local metrics of brain structural networks.

Authors:  Jennifer Andreotti; Kay Jann; Lester Melie-Garcia; Stéphanie Giezendanner; Thomas Dierks; Andrea Federspiel
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8.  Atlas-based analysis of resting-state functional connectivity: evaluation for reproducibility and multi-modal anatomy-function correlation studies.

Authors:  Andreia V Faria; Suresh E Joel; Yajing Zhang; Kenichi Oishi; Peter C M van Zjil; Michael I Miller; James J Pekar; Susumu Mori
Journal:  Neuroimage       Date:  2012-04-03       Impact factor: 6.556

9.  Test-retest reliability of computational network measurements derived from the structural connectome of the human brain.

Authors:  Julia P Owen; Etay Ziv; Polina Bukshpun; Nicholas Pojman; Mari Wakahiro; Jeffrey I Berman; Timothy P L Roberts; Eric J Friedman; Elliott H Sherr; Pratik Mukherjee
Journal:  Brain Connect       Date:  2013

10.  Test-retest reliability of graph metrics in functional brain networks: a resting-state fNIRS study.

Authors:  Haijing Niu; Zhen Li; Xuhong Liao; Jinhui Wang; Tengda Zhao; Ni Shu; Xiaohu Zhao; Yong He
Journal:  PLoS One       Date:  2013-09-09       Impact factor: 3.240

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Review 2.  Biomarkers, designs, and interpretations of resting-state fMRI in translational pharmacological research: A review of state-of-the-Art, challenges, and opportunities for studying brain chemistry.

Authors:  Najmeh Khalili-Mahani; Serge A R B Rombouts; Matthias J P van Osch; Eugene P Duff; Felix Carbonell; Lisa D Nickerson; Lino Becerra; Albert Dahan; Alan C Evans; Jean-Paul Soucy; Richard Wise; Alex P Zijdenbos; Joop M van Gerven
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Authors:  Hengyi Cao; Oliver Y Chen; Sarah C McEwen; Jennifer K Forsyth; Dylan G Gee; Carrie E Bearden; Jean Addington; Bradley Goodyear; Kristin S Cadenhead; Heline Mirzakhanian; Barbara A Cornblatt; Ricardo E Carrión; Daniel H Mathalon; Thomas H McGlashan; Diana O Perkins; Aysenil Belger; Heidi Thermenos; Ming T Tsuang; Theo G M van Erp; Elaine F Walker; Stephan Hamann; Alan Anticevic; Scott W Woods; Tyrone D Cannon
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4.  Altered Network Topology in Patients with Primary Brain Tumors After Fractionated Radiotherapy.

Authors:  Naeim Bahrami; Tyler M Seibert; Roshan Karunamuni; Hauke Bartsch; AnithaPriya Krishnan; Nikdokht Farid; Jona A Hattangadi-Gluth; Carrie R McDonald
Journal:  Brain Connect       Date:  2017-06

5.  Altered whole-brain connectivity in albinism.

Authors:  Thomas Welton; Sarim Ather; Frank A Proudlock; Irene Gottlob; Robert A Dineen
Journal:  Hum Brain Mapp       Date:  2016-09-29       Impact factor: 5.038

6.  Sex differences in associations of arginine vasopressin and oxytocin with resting-state functional brain connectivity.

Authors:  Leah H Rubin; Li Yao; Sarah K Keedy; James L Reilly; Jeffrey R Bishop; C Sue Carter; Hossein Pournajafi-Nazarloo; Lauren L Drogos; Carol A Tamminga; Godfrey D Pearlson; Matcheri S Keshavan; Brett A Clementz; Scot K Hill; Wei Liao; Gong-Jun Ji; Su Lui; John A Sweeney
Journal:  J Neurosci Res       Date:  2017-01-02       Impact factor: 4.164

7.  Toward Leveraging Human Connectomic Data in Large Consortia: Generalizability of fMRI-Based Brain Graphs Across Sites, Sessions, and Paradigms.

Authors:  Hengyi Cao; Sarah C McEwen; Jennifer K Forsyth; Dylan G Gee; Carrie E Bearden; Jean Addington; Bradley Goodyear; Kristin S Cadenhead; Heline Mirzakhanian; Barbara A Cornblatt; Ricardo E Carrión; Daniel H Mathalon; Thomas H McGlashan; Diana O Perkins; Aysenil Belger; Larry J Seidman; Heidi Thermenos; Ming T Tsuang; Theo G M van Erp; Elaine F Walker; Stephan Hamann; Alan Anticevic; Scott W Woods; Tyrone D Cannon
Journal:  Cereb Cortex       Date:  2019-03-01       Impact factor: 5.357

8.  Whole-brain functional network disruption in chronic pain with disk herniation.

Authors:  Shishi Huang; Kenta Wakaizumi; Binbin Wu; Bangli Shen; Bo Wu; Linyu Fan; Marwan N Baliki; Gonghao Zhan; A Vania Apkarian; Lejian Huang
Journal:  Pain       Date:  2019-12       Impact factor: 6.961

9.  Variability of Resting-State Functional MRI Graph Theory Metrics across 3T Platforms.

Authors:  Ranliang Hu; Deqiang Qiu; Ying Guo; Yujie Zhao; Christopher Leatherday; Junjie Wu; Jason W Allen
Journal:  J Neuroimaging       Date:  2019-01-31       Impact factor: 2.486

10.  Alterations in Functional Connectomics Associated With Neurocognitive Changes Following Glioma Resection.

Authors:  Kyle R Noll; Henry S Chen; Jeffrey S Wefel; Vinodh A Kumar; Ping Hou; Sherise D Ferguson; Ganesh Rao; Jason M Johnson; Donald F Schomer; Dima Suki; Sujit S Prabhu; Ho-Ling Liu
Journal:  Neurosurgery       Date:  2021-02-16       Impact factor: 4.654

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