Literature DB >> 22449095

Vibrational analysis of mononitrosyl complexes in hemerythrin and flavodiiron proteins: relevance to detoxifying NO reductase.

Takahiro Hayashi1, Jonathan D Caranto, Hirotoshi Matsumura, Donald M Kurtz, Pierre Moënne-Loccoz.   

Abstract

Flavodiiron proteins (FDPs) play important roles in the microbial nitrosative stress response in low-oxygen environments by reductively scavenging nitric oxide (NO). Recently, we showed that FMN-free diferrous FDP from Thermotoga maritima exposed to 1 equiv NO forms a stable diiron-mononitrosyl complex (deflavo-FDP(NO)) that can react further with NO to form N(2)O [Hayashi, T.; Caranto, J. D.; Wampler, D. A; Kurtz, D. M., Jr.; Moënne-Loccoz, P. Biochemistry 2010, 49, 7040-7049]. Here we report resonance Raman and low-temperature photolysis FTIR data that better define the structure of this diiron-mononitrosyl complex. We first validate this approach using the stable diiron-mononitrosyl complex of hemerythrin, Hr(NO), for which we observe a ν(NO) at 1658 cm(-1), the lowest ν(NO) ever reported for a nonheme {FeNO}(7) species. Both deflavo-FDP(NO) and the mononitrosyl adduct of the flavinated FPD (FDP(NO)) show ν(NO) at 1681 cm(-1), which is also unusually low. These results indicate that, in Hr(NO) and FDP(NO), the coordinated NO is exceptionally electron rich, more closely approaching the Fe(III)(NO(-)) resonance structure. In the case of Hr(NO), this polarization may be promoted by steric enforcement of an unusually small FeNO angle, while in FDP(NO), the Fe(III)(NO(-)) structure may be due to a semibridging electrostatic interaction with the second Fe(II) ion. In Hr(NO), accessibility and steric constraints prevent further reaction of the diiron-mononitrosyl complex with NO, whereas in FDP(NO) the increased nucleophilicity of the nitrosyl group may promote attack by a second NO to produce N(2)O. This latter scenario is supported by theoretical modeling [Blomberg, L. M.; Blomberg, M. R.; Siegbahn, P. E. J. Biol. Inorg. Chem. 2007, 12, 79-89]. Published vibrational data on bioengineered models of denitrifying heme-nonheme NO reductases [Hayashi, T.; Miner, K. D.; Yeung, N.; Lin, Y.-W.; Lu, Y.; Moënne-Loccoz, P. Biochemistry 2011, 50, 5939-5947 ] support a similar mode of activation of a heme {FeNO}(7) species by the nearby nonheme Fe(II).
© 2012 American Chemical Society

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Year:  2012        PMID: 22449095      PMCID: PMC3335888          DOI: 10.1021/ja301812p

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  26 in total

1.  Structures of the superoxide reductase from Pyrococcus furiosus in the oxidized and reduced states.

Authors:  A P Yeh; Y Hu; F E Jenney; M W Adams; D C Rees
Journal:  Biochemistry       Date:  2000-03-14       Impact factor: 3.162

2.  Nitric oxide adducts of the binuclear iron site of hemerythrin: spectroscopy and reactivity.

Authors:  J M Nocek; D M Kurtz; J T Sage; Y M Xia; P Debrunner; A K Shiemke; J Sanders-Loehr; T M Loehr
Journal:  Biochemistry       Date:  1988-02-09       Impact factor: 3.162

3.  Flavorubredoxin, an inducible catalyst for nitric oxide reduction and detoxification in Escherichia coli.

Authors:  Anne M Gardner; Ryan A Helmick; Paul R Gardner
Journal:  J Biol Chem       Date:  2001-12-18       Impact factor: 5.157

4.  Influence of thiolate ligands on reductive N-O bond activation. Probing the O2(-) binding site of a biomimetic superoxide reductase analogue and examining the proton-dependent reduction of nitrite.

Authors:  Gloria Villar-Acevedo; Elaine Nam; Sarah Fitch; Jason Benedict; John Freudenthal; Werner Kaminsky; Julie A Kovacs
Journal:  J Am Chem Soc       Date:  2011-01-05       Impact factor: 15.419

5.  S K-edge X-ray absorption spectroscopy and density functional theory studies of high and low spin {FeNO}7 thiolate complexes: exchange stabilization of electron delocalization in {FeNO}7 and {FeO2}8.

Authors:  Ning Sun; Lei V Liu; Abhishek Dey; Gloria Villar-Acevedo; Julie A Kovacs; Marcetta Y Darensbourg; Keith O Hodgson; Britt Hedman; Edward I Solomon
Journal:  Inorg Chem       Date:  2010-12-15       Impact factor: 5.165

6.  Fourier transform infrared characterization of a CuB-nitrosyl complex in cytochrome ba3 from Thermus thermophilus: relevance to NO reductase activity in heme-copper terminal oxidases.

Authors:  Takahiro Hayashi; I-Jin Lin; Ying Chen; James A Fee; Pierre Moënne-Loccoz
Journal:  J Am Chem Soc       Date:  2007-11-13       Impact factor: 15.419

7.  Carboxylate as the protonation site in (Peroxo)diiron(III) model complexes of soluble methane monooxygenase and related diiron proteins.

Authors:  Loi H Do; Takahiro Hayashi; Pierre Moënne-Loccoz; Stephen J Lippard
Journal:  J Am Chem Soc       Date:  2010-02-03       Impact factor: 15.419

8.  The O2-scavenging flavodiiron protein in the human parasite Giardia intestinalis.

Authors:  Adele Di Matteo; Francesca Maria Scandurra; Fabrizio Testa; Elena Forte; Paolo Sarti; Maurizio Brunori; Alessandro Giuffrè
Journal:  J Biol Chem       Date:  2007-12-12       Impact factor: 5.157

9.  Role of carboxylate bridges in modulating nonheme diiron(II)/O(2) reactivity.

Authors:  Miquel Costas; Clyde W Cady; Sergey V Kryatov; Manabendra Ray; Meghan J Ryan; Elena V Rybak-Akimova; Lawrence Que
Journal:  Inorg Chem       Date:  2003-11-17       Impact factor: 5.165

10.  Nitric oxide binding at the mononuclear active site of reduced Pyrococcus furiosus superoxide reductase.

Authors:  Michael D Clay; Christopher A Cosper; Francis E Jenney; Michael W W Adams; Michael K Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-24       Impact factor: 11.205

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  15 in total

1.  Unsymmetrical bimetallic complexes with M(II)-(μ-OH)-M(III) cores (M(II)M(III) = Fe(II)Fe(III), Mn(II)Fe(III), Mn(II)Mn(III)): structural, magnetic, and redox properties.

Authors:  Yohei Sano; Andrew C Weitz; Joseph W Ziller; Michael P Hendrich; A S Borovik
Journal:  Inorg Chem       Date:  2013-08-30       Impact factor: 5.165

2.  Dioxygen and nitric oxide scavenging by Treponema denticola flavodiiron protein: a mechanistic paradigm for catalysis.

Authors:  Rosanne E Frederick; Jonathan D Caranto; Cesar A Masitas; Linda L Gebhardt; Charles E MacGowan; Ronald J Limberger; Donald M Kurtz
Journal:  J Biol Inorg Chem       Date:  2015-02-21       Impact factor: 3.358

3.  Spectroscopy and DFT Calculations of a Flavo-diiron Enzyme Implicate New Diiron Site Structures.

Authors:  Andrew C Weitz; Nitai Giri; Jonathan D Caranto; Donald M Kurtz; Emile L Bominaar; Michael P Hendrich
Journal:  J Am Chem Soc       Date:  2017-08-16       Impact factor: 15.419

Review 4.  Biological and Bioinspired Inorganic N-N Bond-Forming Reactions.

Authors:  Christina Ferousi; Sean H Majer; Ida M DiMucci; Kyle M Lancaster
Journal:  Chem Rev       Date:  2020-02-28       Impact factor: 60.622

5.  Histidine ligand variants of a flavo-diiron protein: effects on structure and activities.

Authors:  Han Fang; Jonathan D Caranto; Rosalinda Mendoza; Alexander B Taylor; P John Hart; Donald M Kurtz
Journal:  J Biol Inorg Chem       Date:  2012-09-19       Impact factor: 3.358

6.  Mechanism of substrate inhibition in cytochrome-c dependent NO reductases from denitrifying bacteria (cNORs).

Authors:  Hirotoshi Matsumura; Abayomi S Faponle; Peter-Leon Hagedoorn; Takehiko Tosha; Sam P de Visser; Pierre Moënne-Loccoz
Journal:  J Inorg Biochem       Date:  2022-03-01       Impact factor: 4.155

7.  A Nonheme Mononuclear {FeNO}7 Complex that Produces N2 O in the Absence of an Exogenous Reductant.

Authors:  Aniruddha Dey; Jesse B Gordon; Therese Albert; Sinan Sabuncu; Maxime A Siegler; Samantha N MacMillan; Kyle M Lancaster; Pierre Moënne-Loccoz; David P Goldberg
Journal:  Angew Chem Int Ed Engl       Date:  2021-08-20       Impact factor: 16.823

8.  Recent Advances in Multinuclear Metal Nitrosyl Complexes.

Authors:  Lijuan Li; Linlin Li
Journal:  Coord Chem Rev       Date:  2015-04-16       Impact factor: 22.315

Review 9.  The dual function of flavodiiron proteins: oxygen and/or nitric oxide reductases.

Authors:  Célia V Romão; João B Vicente; Patrícia T Borges; Carlos Frazão; Miguel Teixeira
Journal:  J Biol Inorg Chem       Date:  2016-01-14       Impact factor: 3.358

10.  Non-heme mononitrosyldiiron complexes: importance of iron oxidation state in controlling the nature of the nitrosylated products.

Authors:  Amit Majumdar; Stephen J Lippard
Journal:  Inorg Chem       Date:  2013-11-18       Impact factor: 5.165

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