Literature DB >> 12655067

Nitric oxide binding at the mononuclear active site of reduced Pyrococcus furiosus superoxide reductase.

Michael D Clay1, Christopher A Cosper, Francis E Jenney, Michael W W Adams, Michael K Johnson.   

Abstract

Nitric oxide (NO) has been used as a substrate analog to explore the structural and electronic determinants of enzymatic superoxide reduction at the mononuclear iron active site of Pyrococcus furiosus superoxide reductase (SOR) through the use of EPR, resonance Raman, Fourier transform IR, UV-visible absorption, and variable-temperature variable-field magnetic CD spectroscopies. The NO adduct of reduced SOR is shown to have a near-axial S = 32 ground state with ED = 0.06 and D = 12 +/- 2 cm(-1) (where D and E are the axial and rhombic zero-field splitting parameters, respectively) and the UV-visible absorption and magnetic CD spectra are dominated by an out-of-plane NO(-)(pi*)-to-Fe(3+)(dpi) charge-transfer transition, polarized along the zero-field splitting axis. Resonance Raman studies indicate that the NO adduct is six-coordinate with NO ligated in a bent conformation trans to the cysteinyl S, as evidenced by the identification of nu(N-O) at 1,721 cm(-1), nu(Fe-NO) at 475 cm(-1), and nu(Fe-S(Cys), at 291 cm(-1), via (34)S and (15)NO isotope shifts. The electronic and vibrational properties of the S = 32 (FeNO)(7) unit are rationalized in terms of a limiting formulation involving a high-spin (S = 52) Fe(3+) center antiferromagnetically coupled to a (S = 1) NO(-) anion, with a highly covalent Fe(3+)-NO(-) interaction. The results support a catalytic mechanism for SOR, with the first step involving oxidative addition of superoxide to form a ferric-peroxo intermediate, and indicate the important roles that the Fe spin state and the trans cysteinate ligand play in effecting superoxide reduction and peroxide release.

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Year:  2003        PMID: 12655067      PMCID: PMC153001          DOI: 10.1073/pnas.0636858100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  Structures of the superoxide reductase from Pyrococcus furiosus in the oxidized and reduced states.

Authors:  A P Yeh; Y Hu; F E Jenney; M W Adams; D C Rees
Journal:  Biochemistry       Date:  2000-03-14       Impact factor: 3.162

2.  Nitric oxide adducts of the binuclear iron site of hemerythrin: spectroscopy and reactivity.

Authors:  J M Nocek; D M Kurtz; J T Sage; Y M Xia; P Debrunner; A K Shiemke; J Sanders-Loehr; T M Loehr
Journal:  Biochemistry       Date:  1988-02-09       Impact factor: 3.162

3.  Identification of iron(III) peroxo species in the active site of the superoxide reductase SOR from Desulfoarculus baarsii.

Authors:  Christelle Mathé; Tony A Mattioli; Olivier Horner; Murielle Lombard; Jean-Marc Latour; Marc Fontecave; Vincent Nivière
Journal:  J Am Chem Soc       Date:  2002-05-08       Impact factor: 15.419

4.  Pulse radiolysis studies on superoxide reductase from Treponema pallidum.

Authors:  V Nivière; M Lombard; M Fontecave; C Houée-Levin
Journal:  FEBS Lett       Date:  2001-05-25       Impact factor: 4.124

5.  Kinetics, mechanism, and spectroscopy of the reversible binding of nitric oxide to aquated iron(II). An undergraduate text book reaction revisited.

Authors:  Alicja Wanat; Thorsten Schneppensieper; Grazyna Stochel; Rudi van Eldik; Eckhard Bill; Karl Wieghardt
Journal:  Inorg Chem       Date:  2002-01-14       Impact factor: 5.165

6.  A role for rubredoxin in oxidative stress protection in Desulfovibrio vulgaris: catalytic electron transfer to rubrerythrin and two-iron superoxide reductase.

Authors:  E D Coulter; D M Kurtz
Journal:  Arch Biochem Biophys       Date:  2001-10-01       Impact factor: 4.013

7.  Spectroscopic properties and electronic structure of low-spin Fe(III)-alkylperoxo complexes: homolytic cleavage of the O-O bond.

Authors:  N Lehnert; R Y Ho; L Que; E I Solomon
Journal:  J Am Chem Soc       Date:  2001-08-29       Impact factor: 15.419

8.  MCD C-Term Signs, Saturation Behavior, and Determination of Band Polarizations in Randomly Oriented Systems with Spin S >/= (1)/(2). Applications to S = (1)/(2) and S = (5)/(2).

Authors:  Frank Neese; Edward I. Solomon
Journal:  Inorg Chem       Date:  1999-04-19       Impact factor: 5.165

9.  Anaerobic microbes: oxygen detoxification without superoxide dismutase.

Authors:  F E Jenney; M F Verhagen; X Cui; M W Adams
Journal:  Science       Date:  1999-10-08       Impact factor: 47.728

Review 10.  Superoxide reductase: fact or fiction?

Authors:  Michael W W Adams; Francis E Jenney; Michael D Clay; Michael K Johnson
Journal:  J Biol Inorg Chem       Date:  2002-04-18       Impact factor: 3.358

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  28 in total

Review 1.  Biological inorganic chemistry at the beginning of the 21st century.

Authors:  Harry B Gray
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-25       Impact factor: 11.205

Review 2.  Synthetic analogues of cysteinate-ligated non-heme iron and non-corrinoid cobalt enzymes.

Authors:  Julie A Kovacs
Journal:  Chem Rev       Date:  2004-02       Impact factor: 60.622

3.  The "Gln-Type" Thiol Dioxygenase from Azotobacter vinelandii is a 3-Mercaptopropionic Acid Dioxygenase.

Authors:  Brad S Pierce; Bishnu P Subedi; Sinjinee Sardar; Joshua K Crowell
Journal:  Biochemistry       Date:  2015-12-17       Impact factor: 3.162

4.  Characterization of the signaling domain of the NO-responsive regulator NorR from Ralstonia eutropha H16 by site-directed mutagenesis.

Authors:  Andrea Klink; Bettina Elsner; Katja Strube; Rainer Cramm
Journal:  J Bacteriol       Date:  2007-02-02       Impact factor: 3.490

5.  Vibrational analysis of mononitrosyl complexes in hemerythrin and flavodiiron proteins: relevance to detoxifying NO reductase.

Authors:  Takahiro Hayashi; Jonathan D Caranto; Hirotoshi Matsumura; Donald M Kurtz; Pierre Moënne-Loccoz
Journal:  J Am Chem Soc       Date:  2012-04-09       Impact factor: 15.419

6.  Influence of thiolate ligands on reductive N-O bond activation. Probing the O2(-) binding site of a biomimetic superoxide reductase analogue and examining the proton-dependent reduction of nitrite.

Authors:  Gloria Villar-Acevedo; Elaine Nam; Sarah Fitch; Jason Benedict; John Freudenthal; Werner Kaminsky; Julie A Kovacs
Journal:  J Am Chem Soc       Date:  2011-01-05       Impact factor: 15.419

7.  Preparation of non-heme {FeNO}7 models of cysteine dioxygenase: sulfur versus nitrogen ligation and photorelease of nitric oxide.

Authors:  Alison C McQuilken; Yang Ha; Kyle D Sutherlin; Maxime A Siegler; Keith O Hodgson; Britt Hedman; Edward I Solomon; Guy N L Jameson; David P Goldberg
Journal:  J Am Chem Soc       Date:  2013-09-17       Impact factor: 15.419

8.  Influence of the nitrogen donors on nonheme iron models of superoxide reductase: high-spin Fe(III)-OOR complexes.

Authors:  Frances Namuswe; Takahiro Hayashi; Yunbo Jiang; Gary D Kasper; Amy A Narducci Sarjeant; Pierre Moënne-Loccoz; David P Goldberg
Journal:  J Am Chem Soc       Date:  2010-01-13       Impact factor: 15.419

9.  Increasing reactivity by incorporating π-acceptor ligands into coordinatively unsaturated thiolate-ligated iron(II) complexes.

Authors:  Santiago Toledo; Penny Chaau Yan Poon; Morgan Gleaves; Julian Rees; Dylan M Rogers; Werner Kaminsky; Julie A Kovacs
Journal:  Inorganica Chim Acta       Date:  2021-04-30       Impact factor: 2.545

10.  Characterization of NO adducts of the diiron center in protein R2 of Escherichia coli ribonucleotide reductase and site-directed variants; implications for the O2 activation mechanism.

Authors:  Shen Lu; Eduardo Libby; Lana Saleh; Gang Xing; J Martin Bollinger; Pierre Moënne-Loccoz
Journal:  J Biol Inorg Chem       Date:  2004-08-11       Impact factor: 3.358

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