Literature DB >> 21207999

Influence of thiolate ligands on reductive N-O bond activation. Probing the O2(-) binding site of a biomimetic superoxide reductase analogue and examining the proton-dependent reduction of nitrite.

Gloria Villar-Acevedo, Elaine Nam, Sarah Fitch, Jason Benedict, John Freudenthal, Werner Kaminsky, Julie A Kovacs.   

Abstract

Nitric oxide (NO) is frequently used to probe the substrate-binding site of "spectroscopically silent" non-heme Fe(2+) sites of metalloenzymes, such as superoxide reductase (SOR). Herein we use NO to probe the superoxide binding site of our thiolate-ligated biomimetic SOR model [Fe(II)(S(Me(2))N(4)(tren))](+) (1). Like NO-bound trans-cysteinate-ligated SOR (SOR-NO), the rhombic S = 3/2 EPR signal of NO-bound cis-thiolate-ligated [Fe(S(Me(2))N(4)(tren)(NO)](+) (2; g = 4.44, 3.54, 1.97), the isotopically sensitive ν(NO)(ν((15)NO)) stretching frequency (1685(1640) cm(-1)), and the 0.05 Å decrease in Fe-S bond length are shown to be consistent with the oxidative addition of NO to Fe(II) to afford an Fe(III)-NO(-) {FeNO}(7) species containing high-spin (S = 5/2) Fe(III) antiferromagnetically coupled to NO(-) (S = 1). The cis versus trans positioning of the thiolate does not appear to influence these properties. Although it has yet to be crystallographically characterized, SOR-NO is presumed to possess a bent Fe-NO similar to that of 2 (Fe-N-O = 151.7(4)°). The N-O bond is shown to be more activated in 2 relative to N- and O-ligated {FeNO}(7) complexes, and this is attributed to the electron-donating properties of the thiolate ligand. Hydrogen-bonding to the cysteinate sulfur attenuates N-O bond activation in SOR, as shown by its higher ν(NO) frequency (1721 cm(-1)). In contrast, the ν(O-O) frequency of the SOR peroxo intermediate and its analogues is not affected by H-bonds to the cysteinate sulfur or other factors influencing the Fe-SR bond strength; these only influence the ν(Fe-O) frequency. Reactions between 1 and NO(2)(-) are shown to result in the proton-dependent heterolytic cleavage of an N-O bond. The mechanism of this reaction is proposed to involve both Fe(II)-NO(2)(-) and {FeNO}(6) intermediates similar to those implicated in the mechanism of NiR-promoted NO(2)(-) reduction.

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Year:  2011        PMID: 21207999      PMCID: PMC3178331          DOI: 10.1021/ja107551u

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  41 in total

1.  Structures of the superoxide reductase from Pyrococcus furiosus in the oxidized and reduced states.

Authors:  A P Yeh; Y Hu; F E Jenney; M W Adams; D C Rees
Journal:  Biochemistry       Date:  2000-03-14       Impact factor: 3.162

Review 2.  Solid-state structures of metalloporphyrin NO(x )compounds.

Authors:  Graeme R A Wyllie; W Robert Scheidt
Journal:  Chem Rev       Date:  2002-04       Impact factor: 60.622

3.  Structure of isopenicillin N synthase complexed with substrate and the mechanism of penicillin formation.

Authors:  P L Roach; I J Clifton; C M Hensgens; N Shibata; C J Schofield; J Hajdu; J E Baldwin
Journal:  Nature       Date:  1997-06-19       Impact factor: 49.962

4.  Single turnover chemistry and regulation of O2 activation by the oxygenase component of naphthalene 1,2-dioxygenase.

Authors:  M D Wolfe; J V Parales; D T Gibson; J D Lipscomb
Journal:  J Biol Chem       Date:  2000-10-30       Impact factor: 5.157

5.  A low-spin alkylperoxo-iron(III) complex with weak Fe-O and O-O bonds: implications for the mechanism of superoxide reductase.

Authors:  Divya Krishnamurthy; Gary D Kasper; Frances Namuswe; William D Kerber; Amy A Narducci Sarjeant; Pierre Moënne-Loccoz; David P Goldberg
Journal:  J Am Chem Soc       Date:  2006-11-08       Impact factor: 15.419

6.  Electronic structure of ferric heme nitrosyl complexes with thiolate coordination.

Authors:  Florian Paulat; Nicolai Lehnert
Journal:  Inorg Chem       Date:  2007-02-08       Impact factor: 5.165

7.  Iron carbonyl, nitrosyl, and nitro complexes of a tetrapodal pentadentate amine ligand: synthesis, electronic structure, and nitrite reductase-like reactivity.

Authors:  Jesús Pitarch López; Frank W Heinemann; Raju Prakash; Bernd A Hess; Olivier Horner; Claudine Jeandey; Jean-Louis Oddou; Jean-Marc Latour; Andreas Grohmann
Journal:  Chemistry       Date:  2002-12-16       Impact factor: 5.236

8.  Structural, spectroscopic, and computational study of an octahedral, non-heme [Fe-NO](6-8) Series: [Fe(NO)(cyclam-ac)]2+/+/0.

Authors:  Ricardo García Serres; Craig A Grapperhaus; Eberhard Bothe; Eckhard Bill; Thomas Weyhermüller; Frank Neese; Karl Wieghardt
Journal:  J Am Chem Soc       Date:  2004-04-28       Impact factor: 15.419

9.  Nitric oxide binding at the mononuclear active site of reduced Pyrococcus furiosus superoxide reductase.

Authors:  Michael D Clay; Christopher A Cosper; Francis E Jenney; Michael W W Adams; Michael K Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-24       Impact factor: 11.205

10.  VTVH-MCD and DFT studies of thiolate bonding to [FeNO]7/[FeO2]8 complexes of isopenicillin N synthase: substrate determination of oxidase versus oxygenase activity in nonheme Fe enzymes.

Authors:  Christina D Brown; Michael L Neidig; Matthew B Neibergall; John D Lipscomb; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2007-05-17       Impact factor: 15.419

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  12 in total

1.  Characterization and dioxygen reactivity of a new series of coordinatively unsaturated thiolate-ligated manganese(II) complexes.

Authors:  Michael K Coggins; Santiago Toledo; Erika Shaffer; Werner Kaminsky; Jason Shearer; Julie A Kovacs
Journal:  Inorg Chem       Date:  2012-05-29       Impact factor: 5.165

2.  Photoinitiated Reactivity of a Thiolate-Ligated, Spin-Crossover Nonheme {FeNO}(7) Complex with Dioxygen.

Authors:  Alison C McQuilken; Hirotoshi Matsumura; Maximilian Dürr; Alex M Confer; John P Sheckelton; Maxime A Siegler; Tyrel M McQueen; Ivana Ivanović-Burmazović; Pierre Moënne-Loccoz; David P Goldberg
Journal:  J Am Chem Soc       Date:  2016-02-26       Impact factor: 15.419

3.  Vibrational analysis of mononitrosyl complexes in hemerythrin and flavodiiron proteins: relevance to detoxifying NO reductase.

Authors:  Takahiro Hayashi; Jonathan D Caranto; Hirotoshi Matsumura; Donald M Kurtz; Pierre Moënne-Loccoz
Journal:  J Am Chem Soc       Date:  2012-04-09       Impact factor: 15.419

4.  Superoxide Oxidation by a Thiolate-Ligated Iron Complex and Anion Inhibition.

Authors:  Maksym A Dedushko; Jessica H Pikul; Julie A Kovacs
Journal:  Inorg Chem       Date:  2021-04-26       Impact factor: 5.165

5.  Metal-Assisted Oxo Atom Addition to an Fe(III) Thiolate.

Authors:  Gloria Villar-Acevedo; Priscilla Lugo-Mas; Maike N Blakely; Julian A Rees; Abbie S Ganas; Erin M Hanada; Werner Kaminsky; Julie A Kovacs
Journal:  J Am Chem Soc       Date:  2016-12-29       Impact factor: 15.419

6.  A Nonheme Mononuclear {FeNO}7 Complex that Produces N2 O in the Absence of an Exogenous Reductant.

Authors:  Aniruddha Dey; Jesse B Gordon; Therese Albert; Sinan Sabuncu; Maxime A Siegler; Samantha N MacMillan; Kyle M Lancaster; Pierre Moënne-Loccoz; David P Goldberg
Journal:  Angew Chem Int Ed Engl       Date:  2021-08-20       Impact factor: 16.823

7.  Preparation of non-heme {FeNO}7 models of cysteine dioxygenase: sulfur versus nitrogen ligation and photorelease of nitric oxide.

Authors:  Alison C McQuilken; Yang Ha; Kyle D Sutherlin; Maxime A Siegler; Keith O Hodgson; Britt Hedman; Edward I Solomon; Guy N L Jameson; David P Goldberg
Journal:  J Am Chem Soc       Date:  2013-09-17       Impact factor: 15.419

8.  Tuning the Relative Stability and Reactivity of Manganese Dioxygen and Peroxo Intermediates via Systematic Ligand Modification.

Authors:  Julie A Kovacs
Journal:  Acc Chem Res       Date:  2015-09-03       Impact factor: 22.384

9.  Formation of a Reactive, Alkyl Thiolate-Ligated FeIII-Superoxo Intermediate Derived from Dioxygen.

Authors:  Maike N Blakely; Maksym A Dedushko; Penny Chaau Yan Poon; Gloria Villar-Acevedo; Julie A Kovacs
Journal:  J Am Chem Soc       Date:  2019-01-24       Impact factor: 15.419

10.  Nonheme iron-thiolate complexes as structural models of sulfoxide synthase active sites.

Authors:  Danushka M Ekanayake; Anne A Fischer; Maya E Elwood; Alexandra M Guzek; Sergey V Lindeman; Codrina V Popescu; Adam T Fiedler
Journal:  Dalton Trans       Date:  2020-12-22       Impact factor: 4.390

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