Literature DB >> 22411807

Multiple organellar RNA editing factor (MORF) family proteins are required for RNA editing in mitochondria and plastids of plants.

Mizuki Takenaka1, Anja Zehrmann, Daniil Verbitskiy, Matthias Kugelmann, Barbara Härtel, Axel Brennicke.   

Abstract

RNA editing in plastids and mitochondria of flowering plants changes hundreds of selected cytidines to uridines, mostly in coding regions of mRNAs. Specific sequences around the editing sites are presumably recognized by up to 200 pentatricopeptide repeat (PPR) proteins. The here identified family of multiple organellar RNA editing factor (MORF) proteins provides additional components of the RNA editing machinery in both plant organelles. Two MORF proteins are required for editing in plastids; at least two are essential for editing in mitochondria. The loss of a MORF protein abolishes or lowers editing at multiple sites, many of which are addressed individually by PPR proteins. In plastids, both MORF proteins are required for complete editing at almost all sites, suggesting a heterodimeric complex. In yeast two-hybrid and pull-down assays, MORF proteins can connect to form hetero- and homodimers. Furthermore, MORF proteins interact selectively with PPR proteins, establishing a more complex editosome in plant organelles than previously thought.

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Year:  2012        PMID: 22411807      PMCID: PMC3324002          DOI: 10.1073/pnas.1202452109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  The Arabidopsis nuclear DAL gene encodes a chloroplast protein which is required for the maturation of the plastid ribosomal RNAs and is essential for chloroplast differentiation.

Authors:  Cordelia Bisanz; Laurent Bégot; Pierre Carol; Pascual Perez; Muriel Bligny; Hélène Pesey; Jean-Luc Gallois; Silva Lerbs-Mache; Régis Mache
Journal:  Plant Mol Biol       Date:  2003-03       Impact factor: 4.076

2.  Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins.

Authors:  Joshua L Heazlewood; Julian S Tonti-Filippini; Alexander M Gout; David A Day; James Whelan; A Harvey Millar
Journal:  Plant Cell       Date:  2003-12-11       Impact factor: 11.277

Review 3.  RNA editing in trypanosomatid mitochondria.

Authors:  K Stuart
Journal:  Annu Rev Microbiol       Date:  1991       Impact factor: 15.500

4.  RNA editing in plant mitochondria.

Authors:  P S Covello; M W Gray
Journal:  Nature       Date:  1989-10-19       Impact factor: 49.962

5.  RNA editing in plant mitochondria.

Authors:  R Hiesel; B Wissinger; W Schuster; A Brennicke
Journal:  Science       Date:  1989-12-22       Impact factor: 47.728

6.  RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs.

Authors:  P Giegé; A Brennicke
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

7.  cis Recognition elements in plant mitochondrion RNA editing.

Authors:  J C Farré; G Leon; X Jordana; A Araya
Journal:  Mol Cell Biol       Date:  2001-10       Impact factor: 4.272

8.  Assigning DYW-type PPR proteins to RNA editing sites in the funariid mosses Physcomitrella patens and Funaria hygrometrica.

Authors:  Mareike Rüdinger; Péter Szövényi; Stefan A Rensing; Volker Knoop
Journal:  Plant J       Date:  2011-05-11       Impact factor: 6.417

9.  RNA editing in wheat mitochondria results in the conservation of protein sequences.

Authors:  J M Gualberto; L Lamattina; G Bonnard; J H Weil; J M Grienenberger
Journal:  Nature       Date:  1989-10-19       Impact factor: 49.962

10.  Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis.

Authors:  Claire Lurin; Charles Andrés; Sébastien Aubourg; Mohammed Bellaoui; Frédérique Bitton; Clémence Bruyère; Michel Caboche; Cédrig Debast; José Gualberto; Beate Hoffmann; Alain Lecharny; Monique Le Ret; Marie-Laure Martin-Magniette; Hakim Mireau; Nemo Peeters; Jean-Pierre Renou; Boris Szurek; Ludivine Taconnat; Ian Small
Journal:  Plant Cell       Date:  2004-07-21       Impact factor: 11.277

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  91 in total

1.  An RNA Chaperone-Like Protein Plays Critical Roles in Chloroplast mRNA Stability and Translation in Arabidopsis and Maize.

Authors:  Jingjing Jiang; Xin Chai; Nikolay Manavski; Rosalind Williams-Carrier; Baoye He; Andreas Brachmann; Daili Ji; Min Ouyang; Yini Liu; Alice Barkan; Jörg Meurer; Lixin Zhang; Wei Chi
Journal:  Plant Cell       Date:  2019-04-08       Impact factor: 11.277

2.  Function of PPR proteins in plastid gene expression.

Authors:  Toshiharu Shikanai; Sota Fujii
Journal:  RNA Biol       Date:  2013-05-30       Impact factor: 4.652

3.  The longest mitochondrial RNA editing PPR protein MEF12 in Arabidopsis thaliana requires the full-length E domain.

Authors:  Barbara Härtel; Anja Zehrmann; Daniil Verbitskiy; Mizuki Takenaka
Journal:  RNA Biol       Date:  2013-06-20       Impact factor: 4.652

4.  Quantitative trait locus mapping identifies REME2, a PPR-DYW protein required for editing of specific C targets in Arabidopsis mitochondria.

Authors:  Stéphane Bentolila; Arianne M Babina; Arnaud Germain; Maureen R Hanson
Journal:  RNA Biol       Date:  2013-06-18       Impact factor: 4.652

5.  Identification of two pentatricopeptide repeat genes required for RNA editing and zinc binding by C-terminal cytidine deaminase-like domains.

Authors:  Michael L Hayes; Karolyn Giang; Beniam Berhane; R Michael Mulligan
Journal:  J Biol Chem       Date:  2013-11-05       Impact factor: 5.157

6.  PPR protein PDM1/SEL1 is involved in RNA editing and splicing of plastid genes in Arabidopsis thaliana.

Authors:  Hong-Dao Zhang; Yong-Lan Cui; Chao Huang; Qian-Qian Yin; Xue-Mei Qin; Te Xu; Xiao-Fang He; Yi Zhang; Zi-Ran Li; Zhong-Nan Yang
Journal:  Photosynth Res       Date:  2015-06-30       Impact factor: 3.573

7.  A conserved glutamate residue in the C-terminal deaminase domain of pentatricopeptide repeat proteins is required for RNA editing activity.

Authors:  Michael L Hayes; Kim N Dang; Michael F Diaz; R Michael Mulligan
Journal:  J Biol Chem       Date:  2015-03-04       Impact factor: 5.157

8.  Using multiplex single-base extension typing to screen for mutants defective in RNA editing.

Authors:  Mizuki Takenaka; Axel Brennicke
Journal:  Nat Protoc       Date:  2012-10-04       Impact factor: 13.491

9.  RNA Recognition Motif-Containing Protein ORRM4 Broadly Affects Mitochondrial RNA Editing and Impacts Plant Development and Flowering.

Authors:  Xiaowen Shi; Arnaud Germain; Maureen R Hanson; Stéphane Bentolila
Journal:  Plant Physiol       Date:  2015-11-17       Impact factor: 8.340

10.  An RNA recognition motif-containing protein is required for plastid RNA editing in Arabidopsis and maize.

Authors:  Tao Sun; Arnaud Germain; Ludovic Giloteaux; Kamel Hammani; Alice Barkan; Maureen R Hanson; Stéphane Bentolila
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-04       Impact factor: 11.205

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