Literature DB >> 22394510

Chromatin organization - the 30 nm fiber.

Sergei A Grigoryev1, Christopher L Woodcock.   

Abstract

Despite over 30 years of work, the fundamental structure of eukaryotic chromatin remains controversial. Here, we review the roots of this controversy in disparities between results derived from studies of chromatin in nuclei, chromatin isolated from nuclei, and chromatin reconstituted from defined components. Thanks to recent advances in imaging, modeling, and other approaches, it is now possible to recognize some unifying principles driving chromatin architecture at the level of the ubiquitous '30 nm' chromatin fiber. These suggest that fiber architecture involves both zigzag and bent linker motifs, and that such heteromorphic structures facilitate the observed high packing ratios. Interactions between neighboring fibers in highly compact chromatin lead to extensive interdigitation of nucleosomes and the inability to resolve individual fibers in compact chromatin in situ.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22394510     DOI: 10.1016/j.yexcr.2012.02.014

Source DB:  PubMed          Journal:  Exp Cell Res        ISSN: 0014-4827            Impact factor:   3.905


  51 in total

1.  Hierarchical looping of zigzag nucleosome chains in metaphase chromosomes.

Authors:  Sergei A Grigoryev; Gavin Bascom; Jenna M Buckwalter; Michael B Schubert; Christopher L Woodcock; Tamar Schlick
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-19       Impact factor: 11.205

Review 2.  Intra- and inter-nucleosome interactions of the core histone tail domains in higher-order chromatin structure.

Authors:  Sharon Pepenella; Kevin J Murphy; Jeffrey J Hayes
Journal:  Chromosoma       Date:  2013-08-31       Impact factor: 4.316

Review 3.  Mechanisms and Consequences of Double-Strand DNA Break Formation in Chromatin.

Authors:  Wendy J Cannan; David S Pederson
Journal:  J Cell Physiol       Date:  2016-01       Impact factor: 6.384

Review 4.  Histones: at the crossroads of peptide and protein chemistry.

Authors:  Manuel M Müller; Tom W Muir
Journal:  Chem Rev       Date:  2014-10-20       Impact factor: 60.622

5.  Frozen-hydrated chromatin from metaphase chromosomes has an interdigitated multilayer structure.

Authors:  Andrea Chicano; Eva Crosas; Joaquín Otón; Roberto Melero; Benjamin D Engel; Joan-Ramon Daban
Journal:  EMBO J       Date:  2019-01-04       Impact factor: 11.598

6.  Self-assembly of thin plates from micrococcal nuclease-digested chromatin of metaphase chromosomes.

Authors:  Maria Milla; Joan-Ramon Daban
Journal:  Biophys J       Date:  2012-08-08       Impact factor: 4.033

7.  Through thick and thin: the conundrum of chromatin fibre folding in vivo.

Authors:  Delphine Quénet; James G McNally; Yamini Dalal
Journal:  EMBO Rep       Date:  2012-10-05       Impact factor: 8.807

8.  Clipping of flexible tails of histones H3 and H4 affects the structure and dynamics of the nucleosome.

Authors:  Nathan P Nurse; Isabel Jimenez-Useche; Ian Tad Smith; Chongli Yuan
Journal:  Biophys J       Date:  2013-03-05       Impact factor: 4.033

Review 9.  Large-scale chromatin organization: the good, the surprising, and the still perplexing.

Authors:  Andrew S Belmont
Journal:  Curr Opin Cell Biol       Date:  2013-11-13       Impact factor: 8.382

Review 10.  Epigenetic mechanisms and models in the origins of asthma.

Authors:  Wilfried Karmaus; Ali H Ziyab; Todd Everson; John W Holloway
Journal:  Curr Opin Allergy Clin Immunol       Date:  2013-02
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