Literature DB >> 23041656

Through thick and thin: the conundrum of chromatin fibre folding in vivo.

Delphine Quénet1, James G McNally, Yamini Dalal.   

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Year:  2012        PMID: 23041656      PMCID: PMC3492710          DOI: 10.1038/embor.2012.143

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


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  12 in total

Review 1.  Chromatin history: our view from the bridge.

Authors:  Donald E Olins; Ada L Olins
Journal:  Nat Rev Mol Cell Biol       Date:  2003-10       Impact factor: 94.444

Review 2.  Chromatin organization - the 30 nm fiber.

Authors:  Sergei A Grigoryev; Christopher L Woodcock
Journal:  Exp Cell Res       Date:  2012-02-24       Impact factor: 3.905

3.  Solenoidal model for superstructure in chromatin.

Authors:  J T Finch; A Klug
Journal:  Proc Natl Acad Sci U S A       Date:  1976-06       Impact factor: 11.205

4.  Open and closed domains in the mouse genome are configured as 10-nm chromatin fibres.

Authors:  Eden Fussner; Mike Strauss; Ugljesa Djuric; Ren Li; Kashif Ahmed; Michael Hart; James Ellis; David P Bazett-Jones
Journal:  EMBO Rep       Date:  2012-11-06       Impact factor: 8.807

5.  Human mitotic chromosomes consist predominantly of irregularly folded nucleosome fibres without a 30-nm chromatin structure.

Authors:  Yoshinori Nishino; Mikhail Eltsov; Yasumasa Joti; Kazuki Ito; Hideaki Takata; Yukio Takahashi; Saera Hihara; Achilleas S Frangakis; Naoko Imamoto; Tetsuya Ishikawa; Kazuhiro Maeshima
Journal:  EMBO J       Date:  2012-02-17       Impact factor: 11.598

6.  Global chromatin architecture reflects pluripotency and lineage commitment in the early mouse embryo.

Authors:  Kashif Ahmed; Hesam Dehghani; Peter Rugg-Gunn; Eden Fussner; Janet Rossant; David P Bazett-Jones
Journal:  PLoS One       Date:  2010-05-07       Impact factor: 3.240

7.  Chromosomes without a 30-nm chromatin fiber.

Authors:  Yasumasa Joti; Takaaki Hikima; Yoshinori Nishino; Fukumi Kamada; Saera Hihara; Hideaki Takata; Tetsuya Ishikawa; Kazuhiro Maeshima
Journal:  Nucleus       Date:  2012-07-31       Impact factor: 4.197

8.  The three-dimensional architecture of chromatin in situ: electron tomography reveals fibers composed of a continuously variable zig-zag nucleosomal ribbon.

Authors:  R A Horowitz; D A Agard; J W Sedat; C L Woodcock
Journal:  J Cell Biol       Date:  1994-04       Impact factor: 10.539

9.  Large-scale chromatin unfolding and remodeling induced by VP16 acidic activation domain.

Authors:  T Tumbar; G Sudlow; A S Belmont
Journal:  J Cell Biol       Date:  1999-06-28       Impact factor: 10.539

10.  Visualization of G1 chromosomes: a folded, twisted, supercoiled chromonema model of interphase chromatid structure.

Authors:  A S Belmont; K Bruce
Journal:  J Cell Biol       Date:  1994-10       Impact factor: 10.539

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  10 in total

1.  Correlation among DNA Linker Length, Linker Histone Concentration, and Histone Tails in Chromatin.

Authors:  Antoni Luque; Gungor Ozer; Tamar Schlick
Journal:  Biophys J       Date:  2016-06-07       Impact factor: 4.033

Review 2.  The chromatin fiber: multiscale problems and approaches.

Authors:  Gungor Ozer; Antoni Luque; Tamar Schlick
Journal:  Curr Opin Struct Biol       Date:  2015-06-05       Impact factor: 6.809

Review 3.  Insights into chromatin fibre structure by in vitro and in silico single-molecule stretching experiments.

Authors:  Rosana Collepardo-Guevara; Tamar Schlick
Journal:  Biochem Soc Trans       Date:  2013-04       Impact factor: 5.407

Review 4.  Interphase epichromatin: last refuge for the 30-nm chromatin fiber?

Authors:  Peng Xu; Julia Mahamid; Marco Dombrowski; Wolfgang Baumeister; Ada L Olins; Donald E Olins
Journal:  Chromosoma       Date:  2021-06-05       Impact factor: 4.316

5.  Dynamic condensation of linker histone C-terminal domain regulates chromatin structure.

Authors:  Antoni Luque; Rosana Collepardo-Guevara; Sergei Grigoryev; Tamar Schlick
Journal:  Nucleic Acids Res       Date:  2014-06-06       Impact factor: 16.971

6.  Inferring the physical properties of yeast chromatin through Bayesian analysis of whole nucleus simulations.

Authors:  Jean-Michel Arbona; Sébastien Herbert; Emmanuelle Fabre; Christophe Zimmer
Journal:  Genome Biol       Date:  2017-05-03       Impact factor: 13.583

7.  Inferring 3D chromatin structure using a multiscale approach based on quaternions.

Authors:  Claudia Caudai; Emanuele Salerno; Monica Zoppè; Anna Tonazzini
Journal:  BMC Bioinformatics       Date:  2015-07-29       Impact factor: 3.169

Review 8.  Chromatin Dynamics in Vivo: A Game of Musical Chairs.

Authors:  Daniël P Melters; Jonathan Nye; Haiqing Zhao; Yamini Dalal
Journal:  Genes (Basel)       Date:  2015-08-07       Impact factor: 4.096

9.  Chromatin compaction protects genomic DNA from radiation damage.

Authors:  Hideaki Takata; Tomo Hanafusa; Toshiaki Mori; Mari Shimura; Yutaka Iida; Kenichi Ishikawa; Kenichi Yoshikawa; Yuko Yoshikawa; Kazuhiro Maeshima
Journal:  PLoS One       Date:  2013-10-09       Impact factor: 3.240

Review 10.  Chromatin as dynamic 10-nm fibers.

Authors:  Kazuhiro Maeshima; Ryosuke Imai; Sachiko Tamura; Tadasu Nozaki
Journal:  Chromosoma       Date:  2014-04-16       Impact factor: 4.316

  10 in total

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