Literature DB >> 22366417

Physiological and proteomic adaptation of "Aromatoleum aromaticum" EbN1 to low growth rates in benzoate-limited, anoxic chemostats.

Kathleen Trautwein1, Sven Lahme, Lars Wöhlbrand, Christoph Feenders, Kai Mangelsdorf, Jens Harder, Alexander Steinbüchel, Bernd Blasius, Richard Reinhardt, Ralf Rabus.   

Abstract

"Aromatoleum aromaticum" EbN1 was cultivated at different growth rates in benzoate-limited chemostats under nitrate-reducing conditions. Physiological characteristics, proteome dynamics, phospholipid-linked fatty acid (PLFA) composition, and poly(3-hydroxybutyrate) (PHB) content were analyzed in steady-state cells at low (μ(low)) (0.036 h(-1)), medium (μ(med)) (0.108 h(-1)), and high (μ(high)) (0.180 h(-1)) growth rates. A positive correlation to growth rate was observed for cellular parameters (cell size, and DNA and protein contents). The free energy consumed for biomass formation steadily increased with growth rate. In contrast, the energy demand for maintenance increased only from μ(low) to μ(med) and then remained constant until μ(high). The most comprehensive proteomic changes were observed at μ(low) compared to μ(high). Uniformly decreased abundances of protein components of the anaerobic benzoyl coenzyme A (benzoyl-CoA) pathway, central carbon metabolism, and information processing agree with a general deceleration of benzoate metabolism and cellular processes in response to slow growth. In contrast, increased abundances were observed at μ(low) for diverse catabolic proteins and components of uptake systems in the absence of the respective substrate (aromatic or aliphatic compounds) and for proteins involved in stress responses. This potential catabolic versatility and stress defense during slow growth may be interpreted as preparation for future needs.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22366417      PMCID: PMC3347066          DOI: 10.1128/JB.06519-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  67 in total

1.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

2.  Complementing genomics with proteomics: the membrane subproteome of Pseudomonas aeruginosa PAO1.

Authors:  A S Nouwens; S J Cordwell; M R Larsen; M P Molloy; M Gillings; M D Willcox; B J Walsh
Journal:  Electrophoresis       Date:  2000-11       Impact factor: 3.535

3.  Global gene expression in Escherichia coli K-12 during short-term and long-term adaptation to glucose-limited continuous culture conditions.

Authors:  Alessandro G Franchini; Thomas Egli
Journal:  Microbiology       Date:  2006-07       Impact factor: 2.777

4.  Proteogenomic evidence for β-oxidation of plant-derived 3-phenylpropanoids in "Aromatoleum aromaticum" EbN1.

Authors:  Kathleen Trautwein; Heinz Wilkes; Ralf Rabus
Journal:  Proteomics       Date:  2012-05       Impact factor: 3.984

5.  Patterns of protein synthesis in E. coli: a catalog of the amount of 140 individual proteins at different growth rates.

Authors:  S Pedersen; P L Bloch; S Reeh; F C Neidhardt
Journal:  Cell       Date:  1978-05       Impact factor: 41.582

6.  Stress-induced changes of phospholipids in betaproteobacterium Aromatoleum aromaticum strain EbN1 due to alkylbenzene growth substrates.

Authors:  Klaus-G Zink; Ralf Rabus
Journal:  J Mol Microbiol Biotechnol       Date:  2010-02-25

7.  Evaluation of two-dimensional difference gel electrophoresis for protein profiling. Soluble proteins of the marine bacterium Pirellula sp. strain 1.

Authors:  Dörte Gade; Jürgen Thiermann; Dieter Markowsky; Ralf Rabus
Journal:  J Mol Microbiol Biotechnol       Date:  2003

8.  Anaerobic degradation of p-ethylphenol by "Aromatoleum aromaticum" strain EbN1: pathway, regulation, and involved proteins.

Authors:  Lars Wöhlbrand; Heinz Wilkes; Thomas Halder; Ralf Rabus
Journal:  J Bacteriol       Date:  2008-06-06       Impact factor: 3.490

9.  Analysis of gene expression in Escherichia coli in response to changes of growth-limiting nutrient in chemostat cultures.

Authors:  Qiang Hua; Chen Yang; Taku Oshima; Hirotada Mori; Kazuyuki Shimizu
Journal:  Appl Environ Microbiol       Date:  2004-04       Impact factor: 4.792

10.  2-Oxoglutarate:NADP(+) oxidoreductase in Azoarcus evansii: properties and function in electron transfer reactions in aromatic ring reduction.

Authors:  Christa Ebenau-Jehle; Matthias Boll; Georg Fuchs
Journal:  J Bacteriol       Date:  2003-10       Impact factor: 3.490

View more
  12 in total

1.  Assessment of anaerobic toluene biodegradation activity by bssA transcript/gene ratios.

Authors:  Christina N Brow; Reid O'Brien Johnson; Richard L Johnson; Holly M Simon
Journal:  Appl Environ Microbiol       Date:  2013-06-28       Impact factor: 4.792

2.  Anaerobic activation of p-cymene in denitrifying betaproteobacteria: methyl group hydroxylation versus addition to fumarate.

Authors:  Annemieke Strijkstra; Kathleen Trautwein; René Jarling; Lars Wöhlbrand; Marvin Dörries; Richard Reinhardt; Marta Drozdowska; Bernard T Golding; Heinz Wilkes; Ralf Rabus
Journal:  Appl Environ Microbiol       Date:  2014-09-26       Impact factor: 4.792

3.  Nanomolar Responsiveness of an Anaerobic Degradation Specialist to Alkylphenol Pollutants.

Authors:  Jannes Vagts; Arne Weiten; Sabine Scheve; Kristin Kalvelage; Sebastian Swirski; Lars Wöhlbrand; John Neidhardt; Michael Winklhofer; Ralf Rabus
Journal:  J Bacteriol       Date:  2020-02-11       Impact factor: 3.490

4.  The marine bacterium Phaeobacter inhibens secures external ammonium by rapid buildup of intracellular nitrogen stocks.

Authors:  Kathleen Trautwein; Michael Hensler; Katharina Wiegmann; Ekaterina Skorubskaya; Lars Wöhlbrand; Daniel Wünsch; Christina Hinrichs; Christoph Feenders; Constanze Müller; Kristina Schell; Hanna Ruppersberg; Jannes Vagts; Sebastian Koßmehl; Alexander Steinbüchel; Philippe Schmidt-Kopplin; Heinz Wilkes; Helmut Hillebrand; Bernd Blasius; Dietmar Schomburg; Ralf Rabus
Journal:  FEMS Microbiol Ecol       Date:  2018-10-01       Impact factor: 4.194

5.  Benzoate mediates the simultaneous repression of anaerobic 4-methylbenzoate and succinate utilization in Magnetospirillum sp. strain pMbN1.

Authors:  Sven Lahme; Kathleen Trautwein; Annemieke Strijkstra; Marvin Dörries; Lars Wöhlbrand; Ralf Rabus
Journal:  BMC Microbiol       Date:  2014-10-27       Impact factor: 3.605

6.  The predicted σ(54)-dependent regulator EtpR is essential for expression of genes for anaerobic p-ethylphenol and p-hydroxyacetophenone degradation in "Aromatoleum aromaticum" EbN1.

Authors:  Imke Büsing; Mirjam Kant; Marvin Dörries; Lars Wöhlbrand; Ralf Rabus
Journal:  BMC Microbiol       Date:  2015-11-02       Impact factor: 3.605

7.  Integrated analysis of gene expression and metabolic fluxes in PHA-producing Pseudomonas putida grown on glycerol.

Authors:  Veronique Beckers; Ignacio Poblete-Castro; Jürgen Tomasch; Christoph Wittmann
Journal:  Microb Cell Fact       Date:  2016-05-03       Impact factor: 5.328

8.  The ecology of anaerobic degraders of BTEX hydrocarbons in aquifers.

Authors:  Tillmann Lueders
Journal:  FEMS Microbiol Ecol       Date:  2016-11-02       Impact factor: 4.194

9.  Rate-Limiting Mass Transfer in Micropollutant Degradation Revealed by Isotope Fractionation in Chemostat.

Authors:  Benno N Ehrl; Kankana Kundu; Mehdi Gharasoo; Sviatlana Marozava; Martin Elsner
Journal:  Environ Sci Technol       Date:  2018-12-19       Impact factor: 9.028

10.  Defining lower limits of biodegradation: atrazine degradation regulated by mass transfer and maintenance demand in Arthrobacter aurescens TC1.

Authors:  Kankana Kundu; Sviatlana Marozava; Benno Ehrl; Juliane Merl-Pham; Christian Griebler; Martin Elsner
Journal:  ISME J       Date:  2019-05-09       Impact factor: 10.302

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.