Literature DB >> 14526024

2-Oxoglutarate:NADP(+) oxidoreductase in Azoarcus evansii: properties and function in electron transfer reactions in aromatic ring reduction.

Christa Ebenau-Jehle1, Matthias Boll, Georg Fuchs.   

Abstract

The conversion of [(14)C]benzoyl-coenzyme A (CoA) to nonaromatic products in the denitrifying beta-proteobacterium Azoarcus evansii grown anaerobically on benzoate was investigated. With cell extracts and 2-oxoglutarate as the electron donor, benzoyl-CoA reduction occurred at a rate of 10 to 15 nmol min(-1) mg(-1). 2-Oxoglutarate could be replaced by dithionite (200% rate) and by NADPH ( approximately 10% rate); in contrast NADH did not serve as an electron donor. Anaerobic growth on aromatic compounds induced 2-oxoglutarate:acceptor oxidoreductase (KGOR), which specifically reduced NADP(+), and NADPH:acceptor oxidoreductase. KGOR was purified by a 76-fold enrichment. The enzyme had a molecular mass of 290 +/- 20 kDa and was composed of three subunits of 63 (gamma), 62 (alpha), and 37 (beta) kDa in a 1:1:1 ratio, suggesting an (alphabetagamma)(2) composition. The native enzyme contained Fe (24 mol/mol of enzyme), S (23 mol/mol), flavin adenine dinucleotide (FAD; 1.4 mol/mol), and thiamine diphosphate (0.95 mol/mol). KGOR from A. evansii was highly specific for 2-oxoglutarate as the electron donor and accepted both NADP(+) and oxidized viologens as electron acceptors; in contrast NAD(+) was not reduced. These results suggest that benzoyl-CoA reduction is coupled to the complete oxidation of the intermediate acetyl-CoA in the tricarboxylic acid cycle. Electrons generated by KGOR can be transferred to both oxidized ferredoxin and NADP(+), depending on the cellular needs. N-terminal amino acid sequence analysis revealed that the open reading frames for the three subunits of KGOR are similar to three adjacently located open reading frames in Bradyrhizobium japonicum. We suggest that these genes code for a very similar three-subunit KGOR, which may play a role in nitrogen fixation. The alpha-subunit is supposed to harbor one FAD molecule, two [4Fe-4S] clusters, and the NADPH binding site; the beta-subunit is supposed to harbor one thiamine diphosphate molecule and one further [4Fe-4S] cluster; and the gamma-subunit is supposed to harbor the CoA binding site. This is the first study of an NADP(+)-specific KGOR. A similar NADP(+)-specific pyruvate oxidoreductase, which contains all domains in one large subunit, has been reported for the mitochondrion of the protist Euglena gracilis and the apicomplexan Cryptosporidium parvum.

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Year:  2003        PMID: 14526024      PMCID: PMC225024          DOI: 10.1128/JB.185.20.6119-6129.2003

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  53 in total

Review 1.  Structure and electron transfer mechanism of pyruvate:ferredoxin oxidoreductase.

Authors:  M H Charon; A Volbeda; E Chabriere; L Pieulle; J C Fontecilla-Camps
Journal:  Curr Opin Struct Biol       Date:  1999-12       Impact factor: 6.809

2.  The origin of pyruvate: NADP+ oxidoreductase in mitochondria of Euglena gracilis.

Authors:  M Nakazawa; H Inui; R Yamaji; T Yamamoto; S Takenaka; M Ueda; Y Nakano; K Miyatake
Journal:  FEBS Lett       Date:  2000-08-18       Impact factor: 4.124

3.  The genes for anabolic 2-oxoglutarate: ferredoxin oxidoreductase from Hydrogenobacter thermophilus TK-6.

Authors:  N R Yun; H Arai; M Ishii; Y Igarashi
Journal:  Biochem Biophys Res Commun       Date:  2001-03-30       Impact factor: 3.575

4.  STUDIES ON THE CHEMICAL NATURE OF CLOSTRIDIAL FERREDOXIN.

Authors:  W LOVENBERG; B B BUCHANAN; J C RABINOWITZ
Journal:  J Biol Chem       Date:  1963-12       Impact factor: 5.157

5.  Pyruvate : NADP+ oxidoreductase from the mitochondrion of Euglena gracilis and from the apicomplexan Cryptosporidium parvum: a biochemical relic linking pyruvate metabolism in mitochondriate and amitochondriate protists.

Authors:  C Rotte; F Stejskal; G Zhu; J S Keithly; W Martin
Journal:  Mol Biol Evol       Date:  2001-05       Impact factor: 16.240

6.  A Birch-like mechanism in enzymatic benzoyl-CoA reduction: a kinetic study of substrate analogues combined with an ab initio model.

Authors:  Henrik Möbitz; Matthias Boll
Journal:  Biochemistry       Date:  2002-02-12       Impact factor: 3.162

7.  Catabolism of alpha-ketoglutarate by a sucA mutant of Bradyrhizobium japonicum: evidence for an alternative tricarboxylic acid cycle.

Authors:  L S Green; Y Li; D W Emerich; F J Bergersen; D A Day
Journal:  J Bacteriol       Date:  2000-05       Impact factor: 3.490

Review 8.  Nitrogenase: standing at the crossroads.

Authors:  D C Rees; J B Howard
Journal:  Curr Opin Chem Biol       Date:  2000-10       Impact factor: 8.822

9.  Nonaromatic products from anoxic conversion of benzoyl-CoA with benzoyl-CoA reductase and cyclohexa-1,5-diene-1-carbonyl-CoA hydratase.

Authors:  M Boll; D Laempe; W Eisenreich; A Bacher; T Mittelberger; J Heinze; G Fuchs
Journal:  J Biol Chem       Date:  2000-07-21       Impact factor: 5.157

10.  Phylogenetic and metabolic diversity of bacteria degrading aromatic compounds under denitrifying conditions, and description of Thauera phenylacetica sp. nov., Thauera aminoaromaticasp. nov., and Azoarcus buckelii sp. nov.

Authors:  Tahar Mechichi; Erko Stackebrandt; Nasser Gad'on; Georg Fuchs
Journal:  Arch Microbiol       Date:  2002-04-20       Impact factor: 2.552

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  15 in total

1.  An unusual strategy for the anoxic biodegradation of phthalate.

Authors:  Christa Ebenau-Jehle; Mario Mergelsberg; Stefanie Fischer; Thomas Brüls; Nico Jehmlich; Martin von Bergen; Matthias Boll
Journal:  ISME J       Date:  2016-07-08       Impact factor: 10.302

Review 2.  Nutrient sharing between symbionts.

Authors:  James White; Jurgen Prell; Euan K James; Philip Poole
Journal:  Plant Physiol       Date:  2007-06       Impact factor: 8.340

Review 3.  Anaerobic catabolism of aromatic compounds: a genetic and genomic view.

Authors:  Manuel Carmona; María Teresa Zamarro; Blas Blázquez; Gonzalo Durante-Rodríguez; Javier F Juárez; J Andrés Valderrama; María J L Barragán; José Luis García; Eduardo Díaz
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

4.  Combined genomic and proteomic approaches identify gene clusters involved in anaerobic 2-methylnaphthalene degradation in the sulfate-reducing enrichment culture N47.

Authors:  Drazenka Selesi; Nico Jehmlich; Martin von Bergen; Frank Schmidt; Thomas Rattei; Patrick Tischler; Tillmann Lueders; Rainer U Meckenstock
Journal:  J Bacteriol       Date:  2010-01       Impact factor: 3.490

5.  Anaerobic metabolism of indoleacetate.

Authors:  Christa Ebenau-Jehle; Markus Thomas; Gernot Scharf; Daniel Kockelkorn; Bettina Knapp; Karola Schühle; Johann Heider; Georg Fuchs
Journal:  J Bacteriol       Date:  2012-03-23       Impact factor: 3.490

6.  Physiological and proteomic adaptation of "Aromatoleum aromaticum" EbN1 to low growth rates in benzoate-limited, anoxic chemostats.

Authors:  Kathleen Trautwein; Sven Lahme; Lars Wöhlbrand; Christoph Feenders; Kai Mangelsdorf; Jens Harder; Alexander Steinbüchel; Bernd Blasius; Richard Reinhardt; Ralf Rabus
Journal:  J Bacteriol       Date:  2012-02-24       Impact factor: 3.490

7.  An uncultivated nitrate-reducing member of the genus Herminiimonas degrades toluene.

Authors:  So-Jeong Kim; Soo-Je Park; Man-Young Jung; Jong-Geol Kim; Eugene L Madsen; Sung-Keun Rhee
Journal:  Appl Environ Microbiol       Date:  2014-03-14       Impact factor: 4.792

8.  Isocitrate dehydrogenase of Bradyrhizobium japonicum is not required for symbiotic nitrogen fixation with soybean.

Authors:  Ritu Shah; David W Emerich
Journal:  J Bacteriol       Date:  2006-08-25       Impact factor: 3.490

9.  The 5,6,7,8-Tetrahydro-2-Naphthoyl-Coenzyme A Reductase Reaction in the Anaerobic Degradation of Naphthalene and Identification of Downstream Metabolites.

Authors:  Philip Weyrauch; Isabelle Heker; Andrey V Zaytsev; Christian A von Hagen; Meike E Arnold; Bernard T Golding; Rainer U Meckenstock
Journal:  Appl Environ Microbiol       Date:  2020-07-20       Impact factor: 4.792

10.  The bzd gene cluster, coding for anaerobic benzoate catabolism, in Azoarcus sp. strain CIB.

Authors:  María J López Barragán; Manuel Carmona; María T Zamarro; Bärbel Thiele; Matthias Boll; Georg Fuchs; José L García; Eduardo Díaz
Journal:  J Bacteriol       Date:  2004-09       Impact factor: 3.490

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