Literature DB >> 30124819

The marine bacterium Phaeobacter inhibens secures external ammonium by rapid buildup of intracellular nitrogen stocks.

Kathleen Trautwein1, Michael Hensler2, Katharina Wiegmann1, Ekaterina Skorubskaya1, Lars Wöhlbrand1, Daniel Wünsch1, Christina Hinrichs1, Christoph Feenders3, Constanze Müller4, Kristina Schell1, Hanna Ruppersberg1, Jannes Vagts1, Sebastian Koßmehl1, Alexander Steinbüchel5, Philippe Schmidt-Kopplin4, Heinz Wilkes6, Helmut Hillebrand7,8, Bernd Blasius3, Dietmar Schomburg2, Ralf Rabus1.   

Abstract

Reduced nitrogen species are key nutrients for biological productivity in the oceans. Ammonium is often present in low and growth-limiting concentrations, albeit peaks occur during collapse of algal blooms or via input from deep sea upwelling and riverine inflow. Autotrophic phytoplankton exploit ammonium peaks by storing nitrogen intracellularly. In contrast, the strategy of heterotrophic bacterioplankton to acquire ammonium is less well understood. This study revealed the marine bacterium Phaeobacter inhibens DSM 17395, a Roseobacter group member, to have already depleted the external ammonium when only ∼⅓ of the ultimately attained biomass is formed. This was paralleled by a three-fold increase in cellular nitrogen levels and rapid buildup of various nitrogen-containing intracellular metabolites (and enzymes for their biosynthesis) and biopolymers (DNA, RNA and proteins). Moreover, nitrogen-rich cells secreted potential RTX proteins and the antibiotic tropodithietic acid, perhaps to competitively secure pulses of external ammonium and to protect themselves from predation. This complex response may ensure growing cells and their descendants exclusive provision with internal nitrogen stocks. This nutritional strategy appears prevalent also in other roseobacters from distant geographical provenances and could provide a new perspective on the distribution of reduced nitrogen in marine environments, i.e. temporary accumulation in bacterioplankton cells.

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Year:  2018        PMID: 30124819      PMCID: PMC6122490          DOI: 10.1093/femsec/fiy154

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  66 in total

Review 1.  Current two-dimensional electrophoresis technology for proteomics.

Authors:  Angelika Görg; Walter Weiss; Michael J Dunn
Journal:  Proteomics       Date:  2004-12       Impact factor: 3.984

2.  Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom.

Authors:  Hanno Teeling; Bernhard M Fuchs; Dörte Becher; Christine Klockow; Antje Gardebrecht; Christin M Bennke; Mariette Kassabgy; Sixing Huang; Alexander J Mann; Jost Waldmann; Marc Weber; Anna Klindworth; Andreas Otto; Jana Lange; Jörg Bernhardt; Christine Reinsch; Michael Hecker; Jörg Peplies; Frank D Bockelmann; Ulrich Callies; Gunnar Gerdts; Antje Wichels; Karen H Wiltshire; Frank Oliver Glöckner; Thomas Schweder; Rudolf Amann
Journal:  Science       Date:  2012-05-04       Impact factor: 47.728

3.  Increasing importance of deposition of reduced nitrogen in the United States.

Authors:  Yi Li; Bret A Schichtel; John T Walker; Donna B Schwede; Xi Chen; Christopher M B Lehmann; Melissa A Puchalski; David A Gay; Jeffrey L Collett
Journal:  Proc Natl Acad Sci U S A       Date:  2016-05-09       Impact factor: 11.205

Review 4.  Evolutionary ecology of the marine Roseobacter clade.

Authors:  Haiwei Luo; Mary Ann Moran
Journal:  Microbiol Mol Biol Rev       Date:  2014-12       Impact factor: 11.056

5.  Evaluation of two-dimensional difference gel electrophoresis for protein profiling. Soluble proteins of the marine bacterium Pirellula sp. strain 1.

Authors:  Dörte Gade; Jürgen Thiermann; Dieter Markowsky; Ralf Rabus
Journal:  J Mol Microbiol Biotechnol       Date:  2003

6.  Growth phase-dependent global protein and metabolite profiles of Phaeobacter gallaeciensis strain DSM 17395, a member of the marine Roseobacter-clade.

Authors:  Hajo Zech; Sebastian Thole; Kerstin Schreiber; Daniela Kalhöfer; Sonja Voget; Thorsten Brinkhoff; Meinhard Simon; Dietmar Schomburg; Ralf Rabus
Journal:  Proteomics       Date:  2009-07       Impact factor: 3.984

7.  The crystal structure of the Escherichia coli AmtB-GlnK complex reveals how GlnK regulates the ammonia channel.

Authors:  Matthew J Conroy; Anne Durand; Domenico Lupo; Xiao-Dan Li; Per A Bullough; Fritz K Winkler; Mike Merrick
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-12       Impact factor: 11.205

8.  Detection of transcriptional triggers in the dynamics of microbial growth: application to the respiratorily versatile bacterium Shewanella oneidensis.

Authors:  Qasim K Beg; Mattia Zampieri; Niels Klitgord; Sara B Collins; Claudio Altafini; Margrethe H Serres; Daniel Segrè
Journal:  Nucleic Acids Res       Date:  2012-05-25       Impact factor: 16.971

Review 9.  RTX proteins: a highly diverse family secreted by a common mechanism.

Authors:  Irena Linhartová; Ladislav Bumba; Jiří Mašín; Marek Basler; Radim Osička; Jana Kamanová; Kateřina Procházková; Irena Adkins; Jana Hejnová-Holubová; Lenka Sadílková; Jana Morová; Peter Sebo
Journal:  FEMS Microbiol Rev       Date:  2010-11       Impact factor: 16.408

10.  The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases.

Authors:  Ron Caspi; Richard Billington; Luciana Ferrer; Hartmut Foerster; Carol A Fulcher; Ingrid M Keseler; Anamika Kothari; Markus Krummenacker; Mario Latendresse; Lukas A Mueller; Quang Ong; Suzanne Paley; Pallavi Subhraveti; Daniel S Weaver; Peter D Karp
Journal:  Nucleic Acids Res       Date:  2015-11-02       Impact factor: 16.971

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  2 in total

1.  Amino Acid and Sugar Catabolism in the Marine Bacterium Phaeobacter inhibens DSM 17395 from an Energetic Viewpoint.

Authors:  Daniel Wünsch; Kathleen Trautwein; Sabine Scheve; Christina Hinrichs; Christoph Feenders; Bernd Blasius; Dietmar Schomburg; Ralf Rabus
Journal:  Appl Environ Microbiol       Date:  2019-11-27       Impact factor: 4.792

2.  Impact of Quorum Sensing and Tropodithietic Acid Production on the Exometabolome of Phaeobacter inhibens.

Authors:  Sujatha Srinivas; Martine Berger; Thorsten Brinkhoff; Jutta Niggemann
Journal:  Front Microbiol       Date:  2022-06-21       Impact factor: 6.064

  2 in total

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