Literature DB >> 18539747

Anaerobic degradation of p-ethylphenol by "Aromatoleum aromaticum" strain EbN1: pathway, regulation, and involved proteins.

Lars Wöhlbrand1, Heinz Wilkes, Thomas Halder, Ralf Rabus.   

Abstract

The denitrifying "Aromatoleum aromaticum" strain EbN1 was demonstrated to utilize p-ethylphenol under anoxic conditions and was suggested to employ a degradation pathway which is reminiscent of known anaerobic ethylbenzene degradation in the same bacterium: initial hydroxylation of p-ethylphenol to 1-(4-hydroxyphenyl)-ethanol followed by dehydrogenation to p-hydroxyacetophenone. Possibly, subsequent carboxylation and thiolytic cleavage yield p-hydroxybenzoyl-coenzyme A (CoA), which is channeled into the central benzoyl-CoA pathway. Substrate-specific formation of three of the four proposed intermediates was confirmed by gas chromatographic-mass spectrometric analysis and also by applying deuterated p-ethylphenol. Proteins suggested to be involved in this degradation pathway are encoded in a single large operon-like structure ( approximately 15 kb). Among them are a p-cresol methylhydroxylase-like protein (PchCF), two predicted alcohol dehydrogenases (ChnA and EbA309), a biotin-dependent carboxylase (XccABC), and a thiolase (TioL). Proteomic analysis (two-dimensional difference gel electrophoresis) revealed their specific and coordinated upregulation in cells adapted to anaerobic growth with p-ethylphenol and p-hydroxyacetophenone (e.g., PchF up to 29-fold). Coregulated proteins of currently unknown function (e.g., EbA329) are possibly involved in p-ethylphenol- and p-hydroxyacetophenone-specific solvent stress responses and related to other aromatic solvent-induced proteins of strain EbN1.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18539747      PMCID: PMC2519382          DOI: 10.1128/JB.00409-08

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  49 in total

1.  A new mathematical model for relative quantification in real-time RT-PCR.

Authors:  M W Pfaffl
Journal:  Nucleic Acids Res       Date:  2001-05-01       Impact factor: 16.971

Review 2.  Specific and global regulation of genes associated with the degradation of aromatic compounds in bacteria.

Authors:  Ulrike Gerischer
Journal:  J Mol Microbiol Biotechnol       Date:  2002-03

Review 3.  Structure and function of pore-forming beta-barrels from bacteria.

Authors:  Anne H Delcour
Journal:  J Mol Microbiol Biotechnol       Date:  2002-01

4.  Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data.

Authors:  Christian Ramakers; Jan M Ruijter; Ronald H Lekanne Deprez; Antoon F M Moorman
Journal:  Neurosci Lett       Date:  2003-03-13       Impact factor: 3.046

Review 5.  Metabolic diversity in aromatic compound utilization by anaerobic microbes.

Authors:  Jane Gibson; Caroline S Harwood
Journal:  Annu Rev Microbiol       Date:  2002-01-30       Impact factor: 15.500

6.  Genes involved in the anaerobic degradation of ethylbenzene in a denitrifying bacterium, strain EbN1.

Authors:  Ralf Rabus; Michael Kube; Alfred Beck; Friedrich Widdel; Richard Reinhardt
Journal:  Arch Microbiol       Date:  2002-10-03       Impact factor: 2.552

7.  Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.

Authors:  K E Nelson; C Weinel; I T Paulsen; R J Dodson; H Hilbert; V A P Martins dos Santos; D E Fouts; S R Gill; M Pop; M Holmes; L Brinkac; M Beanan; R T DeBoy; S Daugherty; J Kolonay; R Madupu; W Nelson; O White; J Peterson; H Khouri; I Hance; P Chris Lee; E Holtzapple; D Scanlan; K Tran; A Moazzez; T Utterback; M Rizzo; K Lee; D Kosack; D Moestl; H Wedler; J Lauber; D Stjepandic; J Hoheisel; M Straetz; S Heim; C Kiewitz; J A Eisen; K N Timmis; A Düsterhöft; B Tümmler; C M Fraser
Journal:  Environ Microbiol       Date:  2002-12       Impact factor: 5.491

8.  Evaluation of two-dimensional difference gel electrophoresis for protein profiling. Soluble proteins of the marine bacterium Pirellula sp. strain 1.

Authors:  Dörte Gade; Jürgen Thiermann; Dieter Markowsky; Ralf Rabus
Journal:  J Mol Microbiol Biotechnol       Date:  2003

Review 9.  Mechanisms of solvent tolerance in gram-negative bacteria.

Authors:  Juan L Ramos; Estrella Duque; Maria-Trinidad Gallegos; Patricia Godoy; Maria Isabel Ramos-Gonzalez; Antonia Rojas; Wilson Teran; Ana Segura
Journal:  Annu Rev Microbiol       Date:  2002-01-30       Impact factor: 15.500

10.  Toxicity and kinetic parameters of the aerobic biodegradation of the phenol and alkylphenols by a mixed culture.

Authors:  M E Acuña-Argüelles; P Olguin-Lora; E Razo-Flores
Journal:  Biotechnol Lett       Date:  2003-04       Impact factor: 2.461

View more
  12 in total

1.  Comprehensive analyses of transport proteins encoded within the genome of "Aromatoleum aromaticum" strain EbN1.

Authors:  Dorjee G Tamang; Ralf Rabus; Ravi D Barabote; Milton H Saier
Journal:  J Membr Biol       Date:  2009-06-09       Impact factor: 1.843

Review 2.  Anaerobic catabolism of aromatic compounds: a genetic and genomic view.

Authors:  Manuel Carmona; María Teresa Zamarro; Blas Blázquez; Gonzalo Durante-Rodríguez; Javier F Juárez; J Andrés Valderrama; María J L Barragán; José Luis García; Eduardo Díaz
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

3.  Towards the Response Threshold for p-Hydroxyacetophenone in the Denitrifying Bacterium "Aromatoleum aromaticum" EbN1.

Authors:  Jannes Vagts; Sabine Scheve; Mirjam Kant; Lars Wöhlbrand; Ralf Rabus
Journal:  Appl Environ Microbiol       Date:  2018-08-31       Impact factor: 4.792

4.  Physiological and proteomic adaptation of "Aromatoleum aromaticum" EbN1 to low growth rates in benzoate-limited, anoxic chemostats.

Authors:  Kathleen Trautwein; Sven Lahme; Lars Wöhlbrand; Christoph Feenders; Kai Mangelsdorf; Jens Harder; Alexander Steinbüchel; Bernd Blasius; Richard Reinhardt; Ralf Rabus
Journal:  J Bacteriol       Date:  2012-02-24       Impact factor: 3.490

5.  An uncultivated nitrate-reducing member of the genus Herminiimonas degrades toluene.

Authors:  So-Jeong Kim; Soo-Je Park; Man-Young Jung; Jong-Geol Kim; Eugene L Madsen; Sung-Keun Rhee
Journal:  Appl Environ Microbiol       Date:  2014-03-14       Impact factor: 4.792

6.  Nanomolar Responsiveness of an Anaerobic Degradation Specialist to Alkylphenol Pollutants.

Authors:  Jannes Vagts; Arne Weiten; Sabine Scheve; Kristin Kalvelage; Sebastian Swirski; Lars Wöhlbrand; John Neidhardt; Michael Winklhofer; Ralf Rabus
Journal:  J Bacteriol       Date:  2020-02-11       Impact factor: 3.490

7.  Benzoate mediates repression of C(4)-dicarboxylate utilization in "Aromatoleum aromaticum" EbN1.

Authors:  Kathleen Trautwein; Olav Grundmann; Lars Wöhlbrand; Christian Eberlein; Matthias Boll; Ralf Rabus
Journal:  J Bacteriol       Date:  2011-11-11       Impact factor: 3.490

8.  The Catabolic System of Acetovanillone and Acetosyringone in Sphingobium sp. Strain SYK-6 Useful for Upgrading Aromatic Compounds Obtained through Chemical Lignin Depolymerization.

Authors:  Yudai Higuchi; Naofumi Kamimura; Hiroki Takenami; Yusei Kikuiri; Chieko Yasuta; Kenta Tanatani; Toru Shobuda; Yuichiro Otsuka; Masaya Nakamura; Tomonori Sonoki; Eiji Masai
Journal:  Appl Environ Microbiol       Date:  2022-08-08       Impact factor: 5.005

9.  The predicted σ(54)-dependent regulator EtpR is essential for expression of genes for anaerobic p-ethylphenol and p-hydroxyacetophenone degradation in "Aromatoleum aromaticum" EbN1.

Authors:  Imke Büsing; Mirjam Kant; Marvin Dörries; Lars Wöhlbrand; Ralf Rabus
Journal:  BMC Microbiol       Date:  2015-11-02       Impact factor: 3.605

10.  A Fluorescent Bioreporter for Acetophenone and 1-Phenylethanol derived from a Specifically Induced Catabolic Operon.

Authors:  Enrico Muhr; Oliver Leicht; Silvia González Sierra; Martin Thanbichler; Johann Heider
Journal:  Front Microbiol       Date:  2016-01-28       Impact factor: 5.640

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.