Literature DB >> 22337056

Prions are a common mechanism for phenotypic inheritance in wild yeasts.

Randal Halfmann1, Daniel F Jarosz, Sandra K Jones, Amelia Chang, Alex K Lancaster, Susan Lindquist.   

Abstract

The self-templating conformations of yeast prion proteins act as epigenetic elements of inheritance. Yeast prions might provide a mechanism for generating heritable phenotypic diversity that promotes survival in fluctuating environments and the evolution of new traits. However, this hypothesis is highly controversial. Prions that create new traits have not been found in wild strains, leading to the perception that they are rare 'diseases' of laboratory cultivation. Here we biochemically test approximately 700 wild strains of Saccharomyces for [PSI(+)] or [MOT3(+)], and find these prions in many. They conferred diverse phenotypes that were frequently beneficial under selective conditions. Simple meiotic re-assortment of the variation harboured within a strain readily fixed one such trait, making it robust and prion-independent. Finally, we genetically screened for unknown prion elements. Fully one-third of wild strains harboured them. These, too, created diverse, often beneficial phenotypes. Thus, prions broadly govern heritable traits in nature, in a manner that could profoundly expand adaptive opportunities.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22337056      PMCID: PMC3319070          DOI: 10.1038/nature10875

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  46 in total

1.  Dependence and independence of [PSI(+)] and [PIN(+)]: a two-prion system in yeast?

Authors:  I L Derkatch; M E Bradley; S V Masse; S P Zadorsky; G V Polozkov; S G Inge-Vechtomov; S W Liebman
Journal:  EMBO J       Date:  2000-05-02       Impact factor: 11.598

2.  Evolutionary conservation of prion-forming abilities of the yeast Sup35 protein.

Authors:  Y O Chernoff; A P Galkin; E Lewitin; T A Chernova; G P Newnam; S M Belenkiy
Journal:  Mol Microbiol       Date:  2000-02       Impact factor: 3.501

3.  Yeast prions [URE3] and [PSI+] are diseases.

Authors:  Toru Nakayashiki; Cletus P Kurtzman; Herman K Edskes; Reed B Wickner
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-15       Impact factor: 11.205

4.  The Sequence Alignment/Map format and SAMtools.

Authors:  Heng Li; Bob Handsaker; Alec Wysoker; Tim Fennell; Jue Ruan; Nils Homer; Gabor Marth; Goncalo Abecasis; Richard Durbin
Journal:  Bioinformatics       Date:  2009-06-08       Impact factor: 6.937

5.  Yeast [PSI+] prion aggregates are formed by small Sup35 polymers fragmented by Hsp104.

Authors:  Dmitry S Kryndushkin; Ilya M Alexandrov; Michael D Ter-Avanesyan; Vitaly V Kushnirov
Journal:  J Biol Chem       Date:  2003-09-24       Impact factor: 5.157

6.  Is evolution Darwinian or/and Lamarckian?

Authors:  Eugene V Koonin; Yuri I Wolf
Journal:  Biol Direct       Date:  2009-11-11       Impact factor: 4.540

7.  Screening for amyloid aggregation by Semi-Denaturing Detergent-Agarose Gel Electrophoresis.

Authors:  Randal Halfmann; Susan Lindquist
Journal:  J Vis Exp       Date:  2008-07-16       Impact factor: 1.355

8.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

9.  A systematic survey identifies prions and illuminates sequence features of prionogenic proteins.

Authors:  Simon Alberti; Randal Halfmann; Oliver King; Atul Kapila; Susan Lindquist
Journal:  Cell       Date:  2009-04-03       Impact factor: 41.582

10.  Saccharomyces cerevisiae: population divergence and resistance to oxidative stress in clinical, domesticated and wild isolates.

Authors:  Stephanie Diezmann; Fred S Dietrich
Journal:  PLoS One       Date:  2009-04-24       Impact factor: 3.240

View more
  196 in total

1.  Prions and chaperones: Outside the fold.

Authors:  Bijal P Trivedi
Journal:  Nature       Date:  2012-02-15       Impact factor: 49.962

2.  High natural prevalence of a fungal prion.

Authors:  Alfons J M Debets; Henk J P Dalstra; Marijke Slakhorst; Bertha Koopmanschap; Rolf F Hoekstra; Sven J Saupe
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-12       Impact factor: 11.205

3.  Intramolecular phenotypic capacitance in a modular RNA molecule.

Authors:  Eric J Hayden; Devin P Bendixsen; Andreas Wagner
Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-23       Impact factor: 11.205

Review 4.  Genetic assimilation: a review of its potential proximate causes and evolutionary consequences.

Authors:  Ian M Ehrenreich; David W Pfennig
Journal:  Ann Bot       Date:  2015-09-10       Impact factor: 4.357

5.  Prion-like nanofibrils of small molecules (PriSM) selectively inhibit cancer cells by impeding cytoskeleton dynamics.

Authors:  Yi Kuang; Marcus J C Long; Jie Zhou; Junfeng Shi; Yuan Gao; Chen Xu; Lizbeth Hedstrom; Bing Xu
Journal:  J Biol Chem       Date:  2014-08-25       Impact factor: 5.157

Review 6.  More than Just a Phase: Prions at the Crossroads of Epigenetic Inheritance and Evolutionary Change.

Authors:  Anupam K Chakravarty; Daniel F Jarosz
Journal:  J Mol Biol       Date:  2018-07-19       Impact factor: 5.469

7.  Organizing biochemistry in space and time using prion-like self-assembly.

Authors:  Christopher M Jakobson; Daniel F Jarosz
Journal:  Curr Opin Syst Biol       Date:  2017-12-06

8.  Effect of domestication on the spread of the [PIN+] prion in Saccharomyces cerevisiae.

Authors:  Amy C Kelly; Ben Busby; Reed B Wickner
Journal:  Genetics       Date:  2014-05-08       Impact factor: 4.562

9.  Intrinsically Disordered Proteins Drive Emergence and Inheritance of Biological Traits.

Authors:  Sohini Chakrabortee; James S Byers; Sandra Jones; David M Garcia; Bhupinder Bhullar; Amelia Chang; Richard She; Laura Lee; Brayon Fremin; Susan Lindquist; Daniel F Jarosz
Journal:  Cell       Date:  2016-09-29       Impact factor: 41.582

Review 10.  Modulation of efficiency of translation termination in Saccharomyces cerevisiae.

Authors:  Anton A Nizhnikov; Kirill S Antonets; Sergey G Inge-Vechtomov; Irina L Derkatch
Journal:  Prion       Date:  2014-11-01       Impact factor: 3.931

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.