Literature DB >> 29725624

Organizing biochemistry in space and time using prion-like self-assembly.

Christopher M Jakobson1, Daniel F Jarosz1,2.   

Abstract

Prion-like proteins have the capacity to adopt multiple stable conformations, at least one of which can recruit proteins from the native conformation into the alternative fold. Although classically associated with disease, prion-like assembly has recently been proposed to organize a range of normal biochemical processes in space and time. Organisms from bacteria to mammals use prion-like mechanisms to (re)organize their proteome in response to intracellular and extracellular stimuli. Prion-like behavior is an economical means to control biochemistry and gene regulation at the systems level, and prions can act as protein-based genes to facilitate quasi-Lamarckian inheritance of induced traits. These mechanisms allow individual cells to express distinct heritable traits using the same complement of polypeptides. Understanding and controlling prion-like behavior is therefore a promising strategy to combat diverse pathologies and organize engineered biological systems.

Entities:  

Year:  2017        PMID: 29725624      PMCID: PMC5926789          DOI: 10.1016/j.coisb.2017.11.012

Source DB:  PubMed          Journal:  Curr Opin Syst Biol        ISSN: 2452-3100


  79 in total

1.  Origins and kinetic consequences of diversity in Sup35 yeast prion fibers.

Authors:  Angela H DePace; Jonathan S Weissman
Journal:  Nat Struct Biol       Date:  2002-05

2.  Stress granule assembly is mediated by prion-like aggregation of TIA-1.

Authors:  Natalie Gilks; Nancy Kedersha; Maranatha Ayodele; Lily Shen; Georg Stoecklin; Laura M Dember; Paul Anderson
Journal:  Mol Biol Cell       Date:  2004-09-15       Impact factor: 4.138

3.  Critical role of amyloid-like oligomers of Drosophila Orb2 in the persistence of memory.

Authors:  Amitabha Majumdar; Wanda Colón Cesario; Erica White-Grindley; Huoqing Jiang; Fengzhen Ren; Mohammed Repon Khan; Liying Li; Edward Man-Lik Choi; Kasthuri Kannan; Fengli Guo; Jay Unruh; Brian Slaughter; Kausik Si
Journal:  Cell       Date:  2012-01-26       Impact factor: 41.582

4.  A bacterial global regulator forms a prion.

Authors:  Andy H Yuan; Ann Hochschild
Journal:  Science       Date:  2017-01-13       Impact factor: 47.728

5.  Hsp104, Hsp70 and Hsp40 interplay regulates formation, growth and elimination of Sup35 prions.

Authors:  James Shorter; Susan Lindquist
Journal:  EMBO J       Date:  2008-10-02       Impact factor: 11.598

6.  Heritable remodeling of yeast multicellularity by an environmentally responsive prion.

Authors:  Daniel L Holmes; Alex K Lancaster; Susan Lindquist; Randal Halfmann
Journal:  Cell       Date:  2013-03-28       Impact factor: 41.582

7.  A yeast prion, Mod5, promotes acquired drug resistance and cell survival under environmental stress.

Authors:  Genjiro Suzuki; Naoyuki Shimazu; Motomasa Tanaka
Journal:  Science       Date:  2012-04-20       Impact factor: 47.728

Review 8.  Prion diseases of humans and animals: their causes and molecular basis.

Authors:  J Collinge
Journal:  Annu Rev Neurosci       Date:  2001       Impact factor: 12.449

9.  Comprehensive and quantitative mapping of RNA-protein interactions across a transcribed eukaryotic genome.

Authors:  Richard She; Anupam K Chakravarty; Curtis J Layton; Lauren M Chircus; Johan O L Andreasson; Nandita Damaraju; Peter L McMahon; Jason D Buenrostro; Daniel F Jarosz; William J Greenleaf
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-21       Impact factor: 11.205

10.  Prion-like behaviour and tau-dependent cytotoxicity of pyroglutamylated amyloid-β.

Authors:  Justin M Nussbaum; Stephan Schilling; Holger Cynis; Antonia Silva; Eric Swanson; Tanaporn Wangsanut; Kaycie Tayler; Brian Wiltgen; Asa Hatami; Raik Rönicke; Klaus Reymann; Birgit Hutter-Paier; Anca Alexandru; Wolfgang Jagla; Sigrid Graubner; Charles G Glabe; Hans-Ulrich Demuth; George S Bloom
Journal:  Nature       Date:  2012-05-02       Impact factor: 49.962

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  6 in total

1.  Engineered protein disaggregases mitigate toxicity of aberrant prion-like fusion proteins underlying sarcoma.

Authors:  Jeremy J Ryan; Macy L Sprunger; Kayla Holthaus; James Shorter; Meredith E Jackrel
Journal:  J Biol Chem       Date:  2019-06-05       Impact factor: 5.157

Review 2.  It Pays To Be in Phase.

Authors:  Alan K Itakura; Raymond A Futia; Daniel F Jarosz
Journal:  Biochemistry       Date:  2018-03-13       Impact factor: 3.162

3.  Molecular Origins of Complex Heritability in Natural Genotype-to-Phenotype Relationships.

Authors:  Christopher M Jakobson; Daniel F Jarosz
Journal:  Cell Syst       Date:  2019-05-01       Impact factor: 10.304

Review 4.  Mutations, protein homeostasis, and epigenetic control of genome integrity.

Authors:  Jinglin Lucy Xie; Daniel F Jarosz
Journal:  DNA Repair (Amst)       Date:  2018-08-23

5.  The Hunt for Ancient Prions: Archaeal Prion-Like Domains Form Amyloid-Based Epigenetic Elements.

Authors:  Tomasz Zajkowski; Michael D Lee; Shamba S Mondal; Amanda Carbajal; Robert Dec; Patrick D Brennock; Radoslaw W Piast; Jessica E Snyder; Nicholas B Bense; Wojciech Dzwolak; Daniel F Jarosz; Lynn J Rothschild
Journal:  Mol Biol Evol       Date:  2021-05-04       Impact factor: 16.240

Review 6.  FUS and TDP-43 Phases in Health and Disease.

Authors:  Bede Portz; Bo Lim Lee; James Shorter
Journal:  Trends Biochem Sci       Date:  2021-01-11       Impact factor: 13.807

  6 in total

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