Literature DB >> 22304405

Nonionic homopolymeric amphipols: application to membrane protein folding, cell-free synthesis, and solution nuclear magnetic resonance.

Paola Bazzacco1, Emmanuelle Billon-Denis, K Shivaji Sharma, Laurent J Catoire, Sophie Mary, Christel Le Bon, Elodie Point, Jean-Louis Banères, Grégory Durand, Francesca Zito, Bernard Pucci, Jean-Luc Popot.   

Abstract

Nonionic amphipols (NAPols) synthesized by homotelomerization of an amphiphatic monomer are able to keep membrane proteins (MPs) stable and functional in the absence of detergent. Some of their biochemical and biophysical properties and applications have been examined, with particular attention being paid to their complementarity with the classical polyacrylate-based amphipol A8-35. Bacteriorhodopsin (BR) from Halobacterium salinarum and the cytochrome b(6)f complex from Chlamydomonas reinhardtii were found to be in their native state and highly stable following complexation with NAPols. NAPol-trapped BR was shown to undergo its complete photocycle. Because of the pH insensitivity of NAPols, solution nuclear magnetic resonance (NMR) two-dimensional (1)H-(15)N heteronuclear single-quantum coherence spectra of NAPol-trapped outer MP X from Escherichia coli (OmpX) could be recorded at pH 6.8. They present a resolution similar to that of the spectra of OmpX/A8-35 complexes recorded at pH 8.0 and give access to signals from solvent-exposed rapidy exchanging amide protons. Like A8-35, NAPols can be used to fold MPs to their native state as demonstrated here with BR and with the ghrelin G protein-coupled receptor GHS-R1a, thus extending the range of accessible folding conditions. Following NAPol-assisted folding, GHS-R1a bound four of its specific ligands, recruited arrestin-2, and activated binding of GTPγS by the G(αq) protein. Finally, cell-free synthesis of MPs, which is inhibited by A8-35 and sulfonated amphipols, was found to be very efficient in the presence of NAPols. These results open broad new perspectives on the use of amphipols for MP studies.

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Year:  2012        PMID: 22304405     DOI: 10.1021/bi201862v

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  28 in total

Review 1.  Helical membrane protein conformations and their environment.

Authors:  Timothy A Cross; Dylan T Murray; Anthony Watts
Journal:  Eur Biophys J       Date:  2013-09-01       Impact factor: 1.733

2.  Synthesis, characterization and applications of a perdeuterated amphipol.

Authors:  Fabrice Giusti; Jutta Rieger; Laurent J Catoire; Shuo Qian; Antonio N Calabrese; Thomas G Watkinson; Marina Casiraghi; Sheena E Radford; Alison E Ashcroft; Jean-Luc Popot
Journal:  J Membr Biol       Date:  2014-03-21       Impact factor: 1.843

3.  Folding of diphtheria toxin T-domain in the presence of amphipols and fluorinated surfactants: Toward thermodynamic measurements of membrane protein folding.

Authors:  Alexander Kyrychenko; Mykola V Rodnin; Mauricio Vargas-Uribe; Shivaji K Sharma; Grégory Durand; Bernard Pucci; Jean-Luc Popot; Alexey S Ladokhin
Journal:  Biochim Biophys Acta       Date:  2011-09-17

4.  Ten antenna proteins are associated with the core in the supramolecular organization of the photosystem I supercomplex in Chlamydomonas reinhardtii.

Authors:  Hisako Kubota-Kawai; Raymond N Burton-Smith; Ryutaro Tokutsu; Chihong Song; Seiji Akimoto; Makio Yokono; Yoshifumi Ueno; Eunchul Kim; Akimasa Watanabe; Kazuyoshi Murata; Jun Minagawa
Journal:  J Biol Chem       Date:  2019-01-22       Impact factor: 5.157

5.  Amphipol-mediated screening of molecular orthoses specific for membrane protein targets.

Authors:  Yann Ferrandez; Manuela Dezi; Mickael Bosco; Agathe Urvoas; Marie Valerio-Lepiniec; Christel Le Bon; Fabrice Giusti; Isabelle Broutin; Grégory Durand; Ange Polidori; Jean-Luc Popot; Martin Picard; Philippe Minard
Journal:  J Membr Biol       Date:  2014-08-03       Impact factor: 1.843

6.  Solution behavior and crystallization of cytochrome bc₁ in the presence of amphipols.

Authors:  Delphine Charvolin; Martin Picard; Li-Shar Huang; Edward A Berry; Jean-Luc Popot
Journal:  J Membr Biol       Date:  2014-06-19       Impact factor: 1.843

7.  High-resolution structure of a membrane protein transferred from amphipol to a lipidic mesophase.

Authors:  V Polovinkin; I Gushchin; M Sintsov; E Round; T Balandin; P Chervakov; V Shevchenko; P Utrobin; A Popov; V Borshchevskiy; A Mishin; A Kuklin; D Willbold; V Chupin; J-L Popot; V Gordeliy
Journal:  J Membr Biol       Date:  2014-09-06       Impact factor: 1.843

8.  The use of amphipols for solution NMR studies of membrane proteins: advantages and constraints as compared to other solubilizing media.

Authors:  Noelya Planchard; Élodie Point; Tassadite Dahmane; Fabrice Giusti; Marie Renault; Christel Le Bon; Grégory Durand; Alain Milon; Éric Guittet; Manuela Zoonens; Jean-Luc Popot; Laurent J Catoire
Journal:  J Membr Biol       Date:  2014-03-28       Impact factor: 1.843

Review 9.  Amphipols in G protein-coupled receptor pharmacology: what are they good for?

Authors:  Sophie Mary; Marjorie Damian; Rita Rahmeh; Bernard Mouillac; Jacky Marie; Sébastien Granier; Jean-Louis Banères
Journal:  J Membr Biol       Date:  2014-05-07       Impact factor: 1.843

Review 10.  Amphipols for each season.

Authors:  Manuela Zoonens; Jean-Luc Popot
Journal:  J Membr Biol       Date:  2014-06-27       Impact factor: 1.843

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