Literature DB >> 24942818

Solution behavior and crystallization of cytochrome bc₁ in the presence of amphipols.

Delphine Charvolin1, Martin Picard, Li-Shar Huang, Edward A Berry, Jean-Luc Popot.   

Abstract

Detergents classically are used to keep membrane proteins soluble in aqueous solutions, but they tend to destabilize them. This problem can be largely alleviated thanks to the use of amphipols (APols), small amphipathic polymers designed to substitute for detergents. APols adsorb at the surface of the transmembrane region of membrane proteins, keeping them water-soluble while stabilizing them bio-chemically. Membrane protein/APol complexes have proven, however, difficult to crystallize. In this study, the composition and solution properties of complexes formed between mitochondrial cytochrome bc1 and A8-35, the most extensively used APol to date, have been studied by means of size exclusion chromatography, sucrose gradient sedimentation, and small-angle neutron scattering. Stable, monodisperse preparations of bc1/A8-35 complexes can be obtained, which, depending on the medium, undergo either repulsive or attractive interactions. Under crystallization conditions, diffracting three-dimensional crystals of A8-35-stabilized cytochrome bc1 formed, but only in the concomitant presence of APol and detergent.

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Year:  2014        PMID: 24942818     DOI: 10.1007/s00232-014-9694-4

Source DB:  PubMed          Journal:  J Membr Biol        ISSN: 0022-2631            Impact factor:   1.843


  51 in total

1.  An atypical haem in the cytochrome b(6)f complex.

Authors:  David Stroebel; Yves Choquet; Jean-Luc Popot; Daniel Picot
Journal:  Nature       Date:  2003-11-27       Impact factor: 49.962

Review 2.  Single particle electron cryo-microscopy of a mammalian ion channel.

Authors:  Maofu Liao; Erhu Cao; David Julius; Yifan Cheng
Journal:  Curr Opin Struct Biol       Date:  2014-03-25       Impact factor: 6.809

3.  Detergent organisation in solutions and in crystals of membrane proteins.

Authors:  P Timmins; E Pebay-Peyroula; W Welte
Journal:  Biophys Chem       Date:  1994-12       Impact factor: 2.352

4.  Well-defined nanoparticles formed by hydrophobic assembly of a short and polydisperse random terpolymer, amphipol A8-35.

Authors:  Yann Gohon; Fabrice Giusti; Carla Prata; Delphine Charvolin; Peter Timmins; Christine Ebel; Christophe Tribet; Jean-Luc Popot
Journal:  Langmuir       Date:  2006-01-31       Impact factor: 3.882

5.  Synthesis, characterization and applications of a perdeuterated amphipol.

Authors:  Fabrice Giusti; Jutta Rieger; Laurent J Catoire; Shuo Qian; Antonio N Calabrese; Thomas G Watkinson; Marina Casiraghi; Sheena E Radford; Alison E Ashcroft; Jean-Luc Popot
Journal:  J Membr Biol       Date:  2014-03-21       Impact factor: 1.843

6.  High-resolution structure of a membrane protein transferred from amphipol to a lipidic mesophase.

Authors:  V Polovinkin; I Gushchin; M Sintsov; E Round; T Balandin; P Chervakov; V Shevchenko; P Utrobin; A Popov; V Borshchevskiy; A Mishin; A Kuklin; D Willbold; V Chupin; J-L Popot; V Gordeliy
Journal:  J Membr Biol       Date:  2014-09-06       Impact factor: 1.843

7.  Amphipols stabilize the Chlamydia major outer membrane protein and enhance its protective ability as a vaccine.

Authors:  Delia F Tifrea; Guifeng Sun; Sukumar Pal; Gustavo Zardeneta; Melanie J Cocco; Jean-Luc Popot; Luis M de la Maza
Journal:  Vaccine       Date:  2011-05-06       Impact factor: 3.641

8.  Folding and stability of outer membrane protein A (OmpA) from Escherichia coli in an amphipathic polymer, amphipol A8-35.

Authors:  Cosmin L Pocanschi; Jean-Luc Popot; Jörg H Kleinschmidt
Journal:  Eur Biophys J       Date:  2013-02-01       Impact factor: 1.733

9.  Dynamics of membrane protein/amphipol association studied by Förster resonance energy transfer: implications for in vitro studies of amphipol-stabilized membrane proteins.

Authors:  Manuela Zoonens; Fabrice Giusti; Francesca Zito; Jean-Luc Popot
Journal:  Biochemistry       Date:  2007-08-18       Impact factor: 3.162

10.  Amphipathic polymers enable the study of functional membrane proteins in the gas phase.

Authors:  Aneika C Leney; Lindsay M McMorran; Sheena E Radford; Alison E Ashcroft
Journal:  Anal Chem       Date:  2012-10-29       Impact factor: 6.986

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  12 in total

1.  The use of amphipols for NMR structural characterization of 7-TM proteins.

Authors:  Shantha Elter; Thomas Raschle; Sabine Arens; Aldino Viegas; Vladimir Gelev; Manuel Etzkorn; Gerhard Wagner
Journal:  J Membr Biol       Date:  2014-05-25       Impact factor: 1.843

2.  Isolation of Escherichia coli mannitol permease, EIImtl, trapped in amphipol A8-35 and fluorescein-labeled A8-35.

Authors:  Milena Opačić; Fabrice Giusti; Jean-Luc Popot; Jaap Broos
Journal:  J Membr Biol       Date:  2014-06-22       Impact factor: 1.843

Review 3.  Membrane proteins, detergents and crystals: what is the state of the art?

Authors:  Patrick J Loll
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-11-28       Impact factor: 1.056

4.  Amphipol-mediated screening of molecular orthoses specific for membrane protein targets.

Authors:  Yann Ferrandez; Manuela Dezi; Mickael Bosco; Agathe Urvoas; Marie Valerio-Lepiniec; Christel Le Bon; Fabrice Giusti; Isabelle Broutin; Grégory Durand; Ange Polidori; Jean-Luc Popot; Martin Picard; Philippe Minard
Journal:  J Membr Biol       Date:  2014-08-03       Impact factor: 1.843

5.  High-resolution structure of a membrane protein transferred from amphipol to a lipidic mesophase.

Authors:  V Polovinkin; I Gushchin; M Sintsov; E Round; T Balandin; P Chervakov; V Shevchenko; P Utrobin; A Popov; V Borshchevskiy; A Mishin; A Kuklin; D Willbold; V Chupin; J-L Popot; V Gordeliy
Journal:  J Membr Biol       Date:  2014-09-06       Impact factor: 1.843

Review 6.  Labeling and functionalizing amphipols for biological applications.

Authors:  Christel Le Bon; Jean-Luc Popot; Fabrice Giusti
Journal:  J Membr Biol       Date:  2014-04-03       Impact factor: 1.843

Review 7.  Functionalized amphipols: a versatile toolbox suitable for applications of membrane proteins in synthetic biology.

Authors:  Eduardo Antonio Della Pia; Randi Westh Hansen; Manuela Zoonens; Karen L Martinez
Journal:  J Membr Biol       Date:  2014-04-13       Impact factor: 1.843

8.  Amphipol-trapped ExbB-ExbD membrane protein complex from Escherichia coli: a biochemical and structural case study.

Authors:  Aleksandr Sverzhinsky; Shuo Qian; Lin Yang; Marc Allaire; Isabel Moraes; Dewang Ma; Jacqueline W Chung; Manuela Zoonens; Jean-Luc Popot; James W Coulton
Journal:  J Membr Biol       Date:  2014-05-27       Impact factor: 1.843

9.  Molecular dynamics simulations of a membrane protein/amphipol complex.

Authors:  Jason D Perlmutter; Jean-Luc Popot; Jonathan N Sachs
Journal:  J Membr Biol       Date:  2014-06-15       Impact factor: 1.843

Review 10.  Amphipols for each season.

Authors:  Manuela Zoonens; Jean-Luc Popot
Journal:  J Membr Biol       Date:  2014-06-27       Impact factor: 1.843

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