Literature DB >> 24676477

The use of amphipols for solution NMR studies of membrane proteins: advantages and constraints as compared to other solubilizing media.

Noelya Planchard1, Élodie Point, Tassadite Dahmane, Fabrice Giusti, Marie Renault, Christel Le Bon, Grégory Durand, Alain Milon, Éric Guittet, Manuela Zoonens, Jean-Luc Popot, Laurent J Catoire.   

Abstract

Solution-state nuclear magnetic resonance studies of membrane proteins are facilitated by the increased stability that trapping with amphipols confers to most of them as compared to detergent solutions. They have yielded information on the state of folding of the proteins, their areas of contact with the polymer, their dynamics, water accessibility, and the structure of protein-bound ligands. They benefit from the diversification of amphipol chemical structures and the availability of deuterated amphipols. The advantages and constraints of working with amphipols are discussed and compared to those associated with other non-conventional environments, such as bicelles and nanodiscs.

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Year:  2014        PMID: 24676477     DOI: 10.1007/s00232-014-9654-z

Source DB:  PubMed          Journal:  J Membr Biol        ISSN: 0022-2631            Impact factor:   1.843


  72 in total

1.  High-resolution structure of the OmpA membrane domain.

Authors:  A Pautsch; G E Schulz
Journal:  J Mol Biol       Date:  2000-04-28       Impact factor: 5.469

2.  NMR analysis of a 900K GroEL GroES complex.

Authors:  Jocelyne Fiaux; Eric B Bertelsen; Arthur L Horwich; Kurt Wüthrich
Journal:  Nature       Date:  2002-07-11       Impact factor: 49.962

3.  Cellular solid-state nuclear magnetic resonance spectroscopy.

Authors:  Marie Renault; Ria Tommassen-van Boxtel; Martine P Bos; Jan Andries Post; Jan Tommassen; Marc Baldus
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-13       Impact factor: 11.205

4.  The proteasome antechamber maintains substrates in an unfolded state.

Authors:  Amy M Ruschak; Tomasz L Religa; Sarah Breuer; Susanne Witt; Lewis E Kay
Journal:  Nature       Date:  2010-10-14       Impact factor: 49.962

5.  Well-defined nanoparticles formed by hydrophobic assembly of a short and polydisperse random terpolymer, amphipol A8-35.

Authors:  Yann Gohon; Fabrice Giusti; Carla Prata; Delphine Charvolin; Peter Timmins; Christine Ebel; Christophe Tribet; Jean-Luc Popot
Journal:  Langmuir       Date:  2006-01-31       Impact factor: 3.882

6.  Synthesis, characterization and applications of a perdeuterated amphipol.

Authors:  Fabrice Giusti; Jutta Rieger; Laurent J Catoire; Shuo Qian; Antonio N Calabrese; Thomas G Watkinson; Marina Casiraghi; Sheena E Radford; Alison E Ashcroft; Jean-Luc Popot
Journal:  J Membr Biol       Date:  2014-03-21       Impact factor: 1.843

Review 7.  New advances in production and functional folding of G-protein-coupled receptors.

Authors:  Jean-Louis Banères; Jean-Luc Popot; Bernard Mouillac
Journal:  Trends Biotechnol       Date:  2011-04-16       Impact factor: 19.536

8.  Allosteric transitions of Torpedo acetylcholine receptor in lipids, detergent and amphipols: molecular interactions vs. physical constraints.

Authors:  Karen L Martinez; Yann Gohon; Pierre-Jean Corringer; Christophe Tribet; Fabienne Mérola; Jean-Pierre Changeux; Jean-Luc Popot
Journal:  FEBS Lett       Date:  2002-09-25       Impact factor: 4.124

9.  Amphipols stabilize the Chlamydia major outer membrane protein and enhance its protective ability as a vaccine.

Authors:  Delia F Tifrea; Guifeng Sun; Sukumar Pal; Gustavo Zardeneta; Melanie J Cocco; Jean-Luc Popot; Luis M de la Maza
Journal:  Vaccine       Date:  2011-05-06       Impact factor: 3.641

10.  Dynamics of membrane protein/amphipol association studied by Förster resonance energy transfer: implications for in vitro studies of amphipol-stabilized membrane proteins.

Authors:  Manuela Zoonens; Fabrice Giusti; Francesca Zito; Jean-Luc Popot
Journal:  Biochemistry       Date:  2007-08-18       Impact factor: 3.162

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  22 in total

1.  Synthesis, characterization and applications of a perdeuterated amphipol.

Authors:  Fabrice Giusti; Jutta Rieger; Laurent J Catoire; Shuo Qian; Antonio N Calabrese; Thomas G Watkinson; Marina Casiraghi; Sheena E Radford; Alison E Ashcroft; Jean-Luc Popot
Journal:  J Membr Biol       Date:  2014-03-21       Impact factor: 1.843

2.  The use of amphipols for NMR structural characterization of 7-TM proteins.

Authors:  Shantha Elter; Thomas Raschle; Sabine Arens; Aldino Viegas; Vladimir Gelev; Manuel Etzkorn; Gerhard Wagner
Journal:  J Membr Biol       Date:  2014-05-25       Impact factor: 1.843

Review 3.  Nanodiscs in Membrane Biochemistry and Biophysics.

Authors:  Ilia G Denisov; Stephen G Sligar
Journal:  Chem Rev       Date:  2017-02-08       Impact factor: 60.622

4.  Amphipol-mediated screening of molecular orthoses specific for membrane protein targets.

Authors:  Yann Ferrandez; Manuela Dezi; Mickael Bosco; Agathe Urvoas; Marie Valerio-Lepiniec; Christel Le Bon; Fabrice Giusti; Isabelle Broutin; Grégory Durand; Ange Polidori; Jean-Luc Popot; Martin Picard; Philippe Minard
Journal:  J Membr Biol       Date:  2014-08-03       Impact factor: 1.843

5.  Solution behavior and crystallization of cytochrome bc₁ in the presence of amphipols.

Authors:  Delphine Charvolin; Martin Picard; Li-Shar Huang; Edward A Berry; Jean-Luc Popot
Journal:  J Membr Biol       Date:  2014-06-19       Impact factor: 1.843

Review 6.  Labeling and functionalizing amphipols for biological applications.

Authors:  Christel Le Bon; Jean-Luc Popot; Fabrice Giusti
Journal:  J Membr Biol       Date:  2014-04-03       Impact factor: 1.843

Review 7.  Solution NMR of SNAREs, complexin and α-synuclein in association with membrane-mimetics.

Authors:  Binyong Liang; Lukas K Tamm
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2018-02-08       Impact factor: 9.795

8.  Molecular dynamics simulations of a membrane protein/amphipol complex.

Authors:  Jason D Perlmutter; Jean-Luc Popot; Jonathan N Sachs
Journal:  J Membr Biol       Date:  2014-06-15       Impact factor: 1.843

Review 9.  Amphipols in G protein-coupled receptor pharmacology: what are they good for?

Authors:  Sophie Mary; Marjorie Damian; Rita Rahmeh; Bernard Mouillac; Jacky Marie; Sébastien Granier; Jean-Louis Banères
Journal:  J Membr Biol       Date:  2014-05-07       Impact factor: 1.843

Review 10.  Amphipols for each season.

Authors:  Manuela Zoonens; Jean-Luc Popot
Journal:  J Membr Biol       Date:  2014-06-27       Impact factor: 1.843

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