Literature DB >> 22294761

COGENT (COlorectal cancer GENeTics) revisited.

Richard S Houlston1.   

Abstract

Many colorectal cancers (CRCs) develop in genetically susceptible individuals most of whom are not carriers of germ line mismatch repair or APC gene mutations and much of the heritable risk of CRC appears to be attributable to the co-inheritance of multiple low-risk variants. The accumulated experience to date in identifying this class of susceptibility allele has highlighted the need to conduct statistically and methodologically rigorous studies and the need for the multi-centre collaboration. This has been the motivation for establishing the COGENT (COlorectal cancer GENeTics) consortium which now includes over 20 research groups in Europe, Australia, the Americas, China and Japan actively working on CRC genetics. Here, we review the rationale for identifying low-penetrance variants for CRC and the current and future challenges for COGENT.

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Year:  2012        PMID: 22294761      PMCID: PMC3269000          DOI: 10.1093/mutage/ger059

Source DB:  PubMed          Journal:  Mutagenesis        ISSN: 0267-8357            Impact factor:   3.000


  32 in total

1.  Explaining the familial colorectal cancer risk associated with mismatch repair (MMR)-deficient and MMR-stable tumors.

Authors:  Lauri Aaltonen; Louise Johns; Heikki Järvinen; Jukka-Pekka Mecklin; Richard Houlston
Journal:  Clin Cancer Res       Date:  2007-01-01       Impact factor: 12.531

2.  Increasing the power of identifying gene x gene interactions in genome-wide association studies.

Authors:  Charles Kooperberg; Michael Leblanc
Journal:  Genet Epidemiol       Date:  2008-04       Impact factor: 2.135

3.  The common colorectal cancer predisposition SNP rs6983267 at chromosome 8q24 confers potential to enhanced Wnt signaling.

Authors:  Sari Tuupanen; Mikko Turunen; Rainer Lehtonen; Outi Hallikas; Sakari Vanharanta; Teemu Kivioja; Mikael Björklund; Gonghong Wei; Jian Yan; Iina Niittymäki; Jukka-Pekka Mecklin; Heikki Järvinen; Ari Ristimäki; Mariachiara Di-Bernardo; Phil East; Luis Carvajal-Carmona; Richard S Houlston; Ian Tomlinson; Kimmo Palin; Esko Ukkonen; Auli Karhu; Jussi Taipale; Lauri A Aaltonen
Journal:  Nat Genet       Date:  2009-06-28       Impact factor: 38.330

4.  Environmental and heritable factors in the causation of cancer--analyses of cohorts of twins from Sweden, Denmark, and Finland.

Authors:  P Lichtenstein; N V Holm; P K Verkasalo; A Iliadou; J Kaprio; M Koskenvuo; E Pukkala; A Skytthe; K Hemminki
Journal:  N Engl J Med       Date:  2000-07-13       Impact factor: 91.245

5.  The 8q24 cancer risk variant rs6983267 shows long-range interaction with MYC in colorectal cancer.

Authors:  Mark M Pomerantz; Nasim Ahmadiyeh; Li Jia; Paula Herman; Michael P Verzi; Harshavardhan Doddapaneni; Christine A Beckwith; Jennifer A Chan; Adam Hills; Matt Davis; Keluo Yao; Sarah M Kehoe; Heinz-Josef Lenz; Christopher A Haiman; Chunli Yan; Brian E Henderson; Baruch Frenkel; Jordi Barretina; Adam Bass; Josep Tabernero; José Baselga; Meredith M Regan; J Robert Manak; Ramesh Shivdasani; Gerhard A Coetzee; Matthew L Freedman
Journal:  Nat Genet       Date:  2009-06-28       Impact factor: 38.330

Review 6.  Common and rare variants in multifactorial susceptibility to common diseases.

Authors:  Walter Bodmer; Carolina Bonilla
Journal:  Nat Genet       Date:  2008-06       Impact factor: 38.330

7.  Meta-analysis of genome-wide association data identifies four new susceptibility loci for colorectal cancer.

Authors:  Richard S Houlston; Emily Webb; Peter Broderick; Alan M Pittman; Maria Chiara Di Bernardo; Steven Lubbe; Ian Chandler; Jayaram Vijayakrishnan; Kate Sullivan; Steven Penegar; Luis Carvajal-Carmona; Kimberley Howarth; Emma Jaeger; Sarah L Spain; Axel Walther; Ella Barclay; Lynn Martin; Maggie Gorman; Enric Domingo; Ana S Teixeira; David Kerr; Jean-Baptiste Cazier; Iina Niittymäki; Sari Tuupanen; Auli Karhu; Lauri A Aaltonen; Ian P M Tomlinson; Susan M Farrington; Albert Tenesa; James G D Prendergast; Rebecca A Barnetson; Roseanne Cetnarskyj; Mary E Porteous; Paul D P Pharoah; Thibaud Koessler; Jochen Hampe; Stephan Buch; Clemens Schafmayer; Jurgen Tepel; Stefan Schreiber; Henry Völzke; Jenny Chang-Claude; Michael Hoffmeister; Hermann Brenner; Brent W Zanke; Alexandre Montpetit; Thomas J Hudson; Steven Gallinger; Harry Campbell; Malcolm G Dunlop
Journal:  Nat Genet       Date:  2008-11-16       Impact factor: 38.330

8.  Common genetic variants at the CRAC1 (HMPS) locus on chromosome 15q13.3 influence colorectal cancer risk.

Authors:  Emma Jaeger; Emily Webb; Kimberley Howarth; Luis Carvajal-Carmona; Andrew Rowan; Peter Broderick; Axel Walther; Sarah Spain; Alan Pittman; Zoe Kemp; Kate Sullivan; Karl Heinimann; Steven Lubbe; Enric Domingo; Ella Barclay; Lynn Martin; Maggie Gorman; Ian Chandler; Jayaram Vijayakrishnan; Wendy Wood; Elli Papaemmanuil; Steven Penegar; Mobshra Qureshi; Susan Farrington; Albert Tenesa; Jean-Baptiste Cazier; David Kerr; Richard Gray; Julian Peto; Malcolm Dunlop; Harry Campbell; Huw Thomas; Richard Houlston; Ian Tomlinson
Journal:  Nat Genet       Date:  2007-12-16       Impact factor: 38.330

9.  PALB2, which encodes a BRCA2-interacting protein, is a breast cancer susceptibility gene.

Authors:  Nazneen Rahman; Sheila Seal; Deborah Thompson; Patrick Kelly; Anthony Renwick; Anna Elliott; Sarah Reid; Katarina Spanova; Rita Barfoot; Tasnim Chagtai; Hiran Jayatilake; Lesley McGuffog; Sandra Hanks; D Gareth Evans; Diana Eccles; Douglas F Easton; Michael R Stratton
Journal:  Nat Genet       Date:  2006-12-31       Impact factor: 38.330

10.  Estimation of significance thresholds for genomewide association scans.

Authors:  Frank Dudbridge; Arief Gusnanto
Journal:  Genet Epidemiol       Date:  2008-04       Impact factor: 2.135

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  16 in total

1.  The analysis of a large Danish family supports the presence of a susceptibility locus for adenoma and colorectal cancer on chromosome 11q24.

Authors:  Laura Aviaja Rudkjøbing; Hans Eiberg; Hanne Birte Mikkelsen; Marie Louise Mølgaard Binderup; Marie Luise Bisgaard
Journal:  Fam Cancer       Date:  2015-09       Impact factor: 2.375

Review 2.  Genetic predisposition to colorectal cancer: where we stand and future perspectives.

Authors:  Laura Valle
Journal:  World J Gastroenterol       Date:  2014-08-07       Impact factor: 5.742

3.  A genome-wide search for determinants of survival in 1926 patients with advanced colorectal cancer with follow-up in over 22,000 patients.

Authors:  Christopher Wills; Yazhou He; Matthew G Summers; Yi Lin; Amanda I Phipps; Katie Watts; Philip J Law; Nada A Al-Tassan; Timothy S Maughan; Richard Kaplan; Richard S Houlston; Ulrike Peters; Polly A Newcomb; Andrew T Chan; Daniel D Buchanan; Steve Gallinger; Loic L Marchand; Rish K Pai; Qian Shi; Steven R Alberts; Victoria Gray; Hannah D West; Valentina Escott-Price; Malcolm G Dunlop; Jeremy P Cheadle
Journal:  Eur J Cancer       Date:  2021-11-15       Impact factor: 10.002

Review 4.  Risk Prediction Models for Colorectal Cancer: A Systematic Review.

Authors:  Juliet A Usher-Smith; Fiona M Walter; Jon D Emery; Aung K Win; Simon J Griffin
Journal:  Cancer Prev Res (Phila)       Date:  2015-10-13

5.  New insights and clinical advancements in cellular oncology.

Authors:  Ad Geurts van Kessel
Journal:  Cell Oncol (Dordr)       Date:  2012-06       Impact factor: 6.730

6.  Mendelian randomisation implicates hyperlipidaemia as a risk factor for colorectal cancer.

Authors:  Henry Rodriguez-Broadbent; Philip J Law; Amit Sud; Kimmo Palin; Sari Tuupanen; Alexandra Gylfe; Ulrika A Hänninen; Tatiana Cajuso; Tomas Tanskanen; Johanna Kondelin; Eevi Kaasinen; Antti-Pekka Sarin; Samuli Ripatti; Johan G Eriksson; Harri Rissanen; Paul Knekt; Eero Pukkala; Pekka Jousilahti; Veikko Salomaa; Aarno Palotie; Laura Renkonen-Sinisalo; Anna Lepistö; Jan Böhm; Jukka-Pekka Mecklin; Nada A Al-Tassan; Claire Palles; Lynn Martin; Ella Barclay; Susan M Farrington; Maria N Timofeeva; Brian F Meyer; Salma M Wakil; Harry Campbell; Christopher G Smith; Shelley Idziaszczyk; Timothy S Maughan; Richard Kaplan; Rachel Kerr; David Kerr; Michael N Passarelli; Jane C Figueiredo; Daniel D Buchanan; Aung K Win; John L Hopper; Mark A Jenkins; Noralane M Lindor; Polly A Newcomb; Steven Gallinger; David Conti; Fred Schumacher; Graham Casey; Lauri A Aaltonen; Jeremy P Cheadle; Ian P Tomlinson; Malcolm G Dunlop; Richard S Houlston
Journal:  Int J Cancer       Date:  2017-04-06       Impact factor: 7.316

7.  DNA repair and cancer in colon and rectum: Novel players in genetic susceptibility.

Authors:  Barbara Pardini; Alda Corrado; Elisa Paolicchi; Giovanni Cugliari; Sonja I Berndt; Stephane Bezieau; Stephanie A Bien; Hermann Brenner; Bette J Caan; Peter T Campbell; Graham Casey; Andrew T Chan; Jenny Chang-Claude; Michelle Cotterchio; Manish Gala; Steven J Gallinger; Robert W Haile; Tabitha A Harrison; Richard B Hayes; Michael Hoffmeister; John L Hopper; Li Hsu; Jeroen Huyghe; Mark A Jenkins; Loic Le Marchand; Yi Lin; Noralane M Lindor; Hongmei Nan; Polly A Newcomb; Shuji Ogino; John D Potter; Robert E Schoen; Martha L Slattery; Emily White; Ludmila Vodickova; Veronika Vymetalkova; Pavel Vodicka; Federica Gemignani; Ulrike Peters; Alessio Naccarati; Stefano Landi
Journal:  Int J Cancer       Date:  2019-07-04       Impact factor: 7.316

Review 8.  Colorectal cancer: A review of the genome-wide association studies in the kingdom of Saudi Arabia.

Authors:  Abjal P Shaik; Asma S Shaik; Yazeed A Al-Sheikh
Journal:  Saudi J Gastroenterol       Date:  2015 May-Jun       Impact factor: 2.485

9.  Investigation of the effects of DNA repair gene polymorphisms on the risk of colorectal cancer.

Authors:  Ian P M Tomlinson; Richard S Houlston; Grant W Montgomery; Oliver M Sieber; Malcolm G Dunlop
Journal:  Mutagenesis       Date:  2012-03       Impact factor: 3.000

10.  Meta-analysis of mismatch repair polymorphisms within the cogent consortium for colorectal cancer susceptibility.

Authors:  Simone Picelli; Justo Lorenzo Bermejo; Jenny Chang-Claude; Michael Hoffmeister; Ceres Fernández-Rozadilla; Angel Carracedo; Antoni Castells; Sergi Castellví-Bel; Alessio Naccarati; Barbara Pardini; Ludmila Vodickova; Heiko Müller; Bente A Talseth-Palmer; Geoffrey Stibbard; Paolo Peterlongo; Carmela Nici; Silvia Veneroni; Li Li; Graham Casey; Albert Tenesa; Susan M Farrington; Ian Tomlinson; Victor Moreno; Tom van Wezel; Juul Wijnen; Malcolm Dunlop; Paolo Radice; Rodney J Scott; Pavel Vodicka; Clara Ruiz-Ponte; Hermann Brenner; Stephan Buch; Henry Völzke; Jochen Hampe; Clemens Schafmayer; Annika Lindblom
Journal:  PLoS One       Date:  2013-09-06       Impact factor: 3.240

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