Literature DB >> 22253436

Structural and molecular characterization of iron-sensing hemerythrin-like domain within F-box and leucine-rich repeat protein 5 (FBXL5).

Joel W Thompson1, Ameen A Salahudeen, Srinivas Chollangi, Julio C Ruiz, Chad A Brautigam, Thomas M Makris, John D Lipscomb, Diana R Tomchick, Richard K Bruick.   

Abstract

Mammalian cells maintain iron homeostasis by sensing changes in bioavailable iron levels and promoting adaptive responses. FBXL5 is a subunit of an E3 ubiquitin ligase complex that mediates the stability of iron regulatory protein 2, an important posttranscriptional regulator of several genes involved in iron metabolism. The stability of FBXL5 is regulated in an iron- and oxygen-responsive manner, contingent upon the presence of its N-terminal domain. Here we present the atomic structure of the FBXL5 N terminus, a hemerythrin-like α-helical bundle fold not previously observed in mammalian proteins. The core of this domain employs an unusual assortment of amino acids necessary for the assembly and sensing properties of its diiron center. These regulatory features govern the accessibility of a mapped sequence required for proteasomal degradation of FBXL5. Detailed molecular and structural characterization of the ligand-responsive hemerythrin domain provides insights into the mechanisms by which FBXL5 serves as a unique mammalian metabolic sensor.

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Year:  2012        PMID: 22253436      PMCID: PMC3293540          DOI: 10.1074/jbc.M111.308684

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  37 in total

1.  Breaking good resolutions with ARP/wARP.

Authors:  Richard J Morris; Petrus H Zwart; Serge Cohen; Francisco J Fernandez; Mattheos Kakaris; Olga Kirillova; Clemens Vonrhein; Anastassis Perrakis; Victor S Lamzin
Journal:  J Synchrotron Radiat       Date:  2003-11-28       Impact factor: 2.616

2.  Substructure solution with SHELXD.

Authors:  Thomas R Schneider; George M Sheldrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-28

3.  Miscellaneous algorithms for density modification.

Authors:  K Cowtan; P Main
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-07-01

Review 4.  Oxygen-carrying proteins: three solutions to a common problem.

Authors:  D M Kurtz
Journal:  Essays Biochem       Date:  1999       Impact factor: 8.000

5.  HIFalpha targeted for VHL-mediated destruction by proline hydroxylation: implications for O2 sensing.

Authors:  M Ivan; K Kondo; H Yang; W Kim; J Valiando; M Ohh; A Salic; J M Asara; W S Lane; W G Kaelin
Journal:  Science       Date:  2001-04-05       Impact factor: 47.728

6.  A family of diiron monooxygenases catalyzing amino acid beta-hydroxylation in antibiotic biosynthesis.

Authors:  Thomas M Makris; Mrinmoy Chakrabarti; Eckard Münck; John D Lipscomb
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-16       Impact factor: 11.205

7.  Amino acid sequence of the small cadmium-binding protein (MP II) from Nereis diversicolor (annelida, polychaeta). Evidence for a myohemerythrin structure.

Authors:  S Demuynck; K W Li; R Van der Schors; N Dhainaut-Courtois
Journal:  Eur J Biochem       Date:  1993-10-01

8.  Molecular characterization of a second iron-responsive element binding protein, iron regulatory protein 2. Structure, function, and post-translational regulation.

Authors:  F Samaniego; J Chin; K Iwai; T A Rouault; R D Klausner
Journal:  J Biol Chem       Date:  1994-12-09       Impact factor: 5.157

9.  Reversible dioxygen binding to hemerythrin.

Authors:  Maria Wirstam; Stephen J Lippard; Richard A Friesner
Journal:  J Am Chem Soc       Date:  2003-04-02       Impact factor: 15.419

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  30 in total

1.  Hemerythrin-like domain within F-box and leucine-rich repeat protein 5 (FBXL5) communicates cellular iron and oxygen availability by distinct mechanisms.

Authors:  Srinivas Chollangi; Joel W Thompson; Julio C Ruiz; Kevin H Gardner; Richard K Bruick
Journal:  J Biol Chem       Date:  2012-05-30       Impact factor: 5.157

Review 2.  Mammalian iron metabolism and its control by iron regulatory proteins.

Authors:  Cole P Anderson; Macy Shen; Richard S Eisenstein; Elizabeth A Leibold
Journal:  Biochim Biophys Acta       Date:  2012-05-17

Review 3.  F-box and leucine-rich repeat protein 5 (FBXL5): sensing intracellular iron and oxygen.

Authors:  Julio C Ruiz; Richard K Bruick
Journal:  J Inorg Biochem       Date:  2014-01-25       Impact factor: 4.155

4.  A bacterial hemerythrin domain regulates the activity of a Vibrio cholerae diguanylate cyclase.

Authors:  Ruth A Schaller; Syed Khalid Ali; Karl E Klose; Donald M Kurtz
Journal:  Biochemistry       Date:  2012-10-18       Impact factor: 3.162

Review 5.  Protein degradation and iron homeostasis.

Authors:  Joel W Thompson; Richard K Bruick
Journal:  Biochim Biophys Acta       Date:  2012-02-10

6.  Hypoxia Rescues Frataxin Loss by Restoring Iron Sulfur Cluster Biogenesis.

Authors:  Tslil Ast; Joshua D Meisel; Shachin Patra; Hong Wang; Robert M H Grange; Sharon H Kim; Sarah E Calvo; Lauren L Orefice; Fumiaki Nagashima; Fumito Ichinose; Warren M Zapol; Gary Ruvkun; David P Barondeau; Vamsi K Mootha
Journal:  Cell       Date:  2019-04-25       Impact factor: 41.582

7.  Iron-binding E3 ligase mediates iron response in plants by targeting basic helix-loop-helix transcription factors.

Authors:  Devarshi Selote; Rozalynne Samira; Anna Matthiadis; Jeffrey W Gillikin; Terri A Long
Journal:  Plant Physiol       Date:  2014-12-01       Impact factor: 8.340

8.  HERC2 targets the iron regulator FBXL5 for degradation and modulates iron metabolism.

Authors:  Toshiro Moroishi; Takayoshi Yamauchi; Masaaki Nishiyama; Keiichi I Nakayama
Journal:  J Biol Chem       Date:  2014-04-28       Impact factor: 5.157

Review 9.  Oxygen sensing strategies in mammals and bacteria.

Authors:  Cornelius Y Taabazuing; John A Hangasky; Michael J Knapp
Journal:  J Inorg Biochem       Date:  2014-01-03       Impact factor: 4.155

10.  Diversity of the metal-transporting P1B-type ATPases.

Authors:  Aaron T Smith; Kyle P Smith; Amy C Rosenzweig
Journal:  J Biol Inorg Chem       Date:  2014-04-13       Impact factor: 3.358

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