Literature DB >> 22237515

Setting up an ancient DNA laboratory.

Tara L Fulton1.   

Abstract

Entering into the world of ancient DNA research is nontrivial. Because the DNA in most ancient specimens is degraded to some extent, the potential for contamination of ancient samples and DNA extracts with modern DNA is considerable. To minimize the risk associated with working with ancient DNA, experimental protocols specific to handling ancient specimens have been introduced. Here, I outline the challenges associated with working with ancient DNA and describe guidelines for setting up a new ancient DNA laboratory. I also discuss steps that can be taken at the sample collection and preparation stage to minimize the potential for contamination with exogenous sources of DNA.

Mesh:

Substances:

Year:  2012        PMID: 22237515     DOI: 10.1007/978-1-61779-516-9_1

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  10 in total

1.  Like a pig out of water: seaborne spread of domestic pigs in Southern Italy and Sardinia during the Bronze and Iron Ages.

Authors:  C Lega; D Fulgione; A Genovese; L Rook; M Masseti; M Meiri; A Cinzia Marra; F Carotenuto; P Raia
Journal:  Heredity (Edinb)       Date:  2016-09-21       Impact factor: 3.821

2.  Fossil and genomic evidence constrains the timing of bison arrival in North America.

Authors:  Duane Froese; Mathias Stiller; Peter D Heintzman; Alberto V Reyes; Grant D Zazula; André E R Soares; Matthias Meyer; Elizabeth Hall; Britta J L Jensen; Lee J Arnold; Ross D E MacPhee; Beth Shapiro
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-13       Impact factor: 11.205

3.  First Bronze Age Human Mitogenomes from Calabria (Grotta Della Monaca, Southern Italy).

Authors:  Francesco Fontani; Elisabetta Cilli; Fabiola Arena; Stefania Sarno; Alessandra Modi; Sara De Fanti; Adam Jon Andrews; Adriana Latorre; Paolo Abondio; Felice Larocca; Martina Lari; David Caramelli; Emanuela Gualdi-Russo; Donata Luiselli
Journal:  Genes (Basel)       Date:  2021-04-25       Impact factor: 4.096

4.  Ancient DNA assessment of tiger salamander population in Yellowstone National Park.

Authors:  Sarah K McMenamin; Elizabeth A Hadly
Journal:  PLoS One       Date:  2012-03-12       Impact factor: 3.240

5.  Ancient DNA Analysis Suggests Negligible Impact of the Wari Empire Expansion in Peru's Central Coast during the Middle Horizon.

Authors:  Guido Valverde; María Inés Barreto Romero; Isabel Flores Espinoza; Alan Cooper; Lars Fehren-Schmitz; Bastien Llamas; Wolfgang Haak
Journal:  PLoS One       Date:  2016-06-01       Impact factor: 3.240

6.  Reduction of the contaminant fraction of DNA obtained from an ancient giant panda bone.

Authors:  Nikolas Basler; Georgios Xenikoudakis; Michael V Westbury; Lingfeng Song; Guilian Sheng; Axel Barlow
Journal:  BMC Res Notes       Date:  2017-12-20

7.  High mitochondrial diversity of domesticated goats persisted among Bronze and Iron Age pastoralists in the Inner Asian Mountain Corridor.

Authors:  Taylor R Hermes; Michael D Frachetti; Dmitriy Voyakin; Antonina S Yerlomaeva; Arman Z Beisenov; Paula N Doumani Dupuy; Dmitry V Papin; Giedre Motuzaite Matuzeviciute; Jamsranjav Bayarsaikhan; Jean-Luc Houle; Alexey A Tishkin; Almut Nebel; Ben Krause-Kyora; Cheryl A Makarewicz
Journal:  PLoS One       Date:  2020-05-21       Impact factor: 3.240

8.  Population Dynamics in Italian Canids between the Late Pleistocene and Bronze Age.

Authors:  Kyriaki Koupadi; Francesco Fontani; Marta Maria Ciucani; Elena Maini; Sara De Fanti; Maurizio Cattani; Antonio Curci; Gabriele Nenzioni; Paolo Reggiani; Adam J Andrews; Stefania Sarno; Carla Bini; Susi Pelotti; Romolo Caniglia; Donata Luiselli; Elisabetta Cilli
Journal:  Genes (Basel)       Date:  2020-11-26       Impact factor: 4.096

9.  Transport distance of invertebrate environmental DNA in a natural river.

Authors:  Kristy Deiner; Florian Altermatt
Journal:  PLoS One       Date:  2014-02-11       Impact factor: 3.240

10.  Use of domesticated pigs by Mesolithic hunter-gatherers in northwestern Europe.

Authors:  Ben Krause-Kyora; Cheryl Makarewicz; Allowen Evin; Linus Girdland Flink; Keith Dobney; Greger Larson; Sönke Hartz; Stefan Schreiber; Claus von Carnap-Bornheim; Nicole von Wurmb-Schwark; Almut Nebel
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.