Literature DB >> 33922908

First Bronze Age Human Mitogenomes from Calabria (Grotta Della Monaca, Southern Italy).

Francesco Fontani1, Elisabetta Cilli1, Fabiola Arena2,3, Stefania Sarno4, Alessandra Modi5, Sara De Fanti4,6, Adam Jon Andrews1,4, Adriana Latorre1, Paolo Abondio4, Felice Larocca3,7, Martina Lari5, David Caramelli5, Emanuela Gualdi-Russo2, Donata Luiselli1.   

Abstract

The Italian peninsula was host to a strong history of migration processes that shaped its genomic variability since prehistoric times. During the Metal Age, Sicily and Southern Italy were the protagonists of intense trade networks and settlements along the Mediterranean. Nonetheless, ancient DNA studies in Southern Italy are, at present, still limited to prehistoric and Roman Apulia. Here, we present the first mitogenomes from a Middle Bronze Age cave burial in Calabria to address this knowledge gap. We adopted a hybridization capture approach, which enabled the recovery of one complete and one partial mitochondrial genome. Phylogenetic analysis assigned these two individuals to the H1e and H5 subhaplogroups, respectively. This preliminary phylogenetic analysis supports affinities with coeval Sicilian populations, along with Linearbandkeramik and Bell Beaker cultures maternal lineages from Central Europe and Iberia. Our work represents a starting point which contributes to the comprehension of migrations and population dynamics in Southern Italy, and highlights this knowledge gap yet to be filled by genomic studies.

Entities:  

Keywords:  Bronze Age; Italy; ancient DNA; archaeology; human; mitochondrial DNA; paleogenomics

Year:  2021        PMID: 33922908     DOI: 10.3390/genes12050636

Source DB:  PubMed          Journal:  Genes (Basel)        ISSN: 2073-4425            Impact factor:   4.096


  57 in total

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Authors:  Aaron McKenna; Matthew Hanna; Eric Banks; Andrey Sivachenko; Kristian Cibulskis; Andrew Kernytsky; Kiran Garimella; David Altshuler; Stacey Gabriel; Mark Daly; Mark A DePristo
Journal:  Genome Res       Date:  2010-07-19       Impact factor: 9.043

2.  Assessing ancient DNA studies.

Authors:  M Thomas P Gilbert; Hans-Jürgen Bandelt; Michael Hofreiter; Ian Barnes
Journal:  Trends Ecol Evol       Date:  2005-07-21       Impact factor: 17.712

3.  Linguistic, geographic and genetic isolation: a collaborative study of Italian populations.

Authors:  Marco Capocasa; Paolo Anagnostou; Valeria Bachis; Cinzia Battaggia; Stefania Bertoncini; Gianfranco Biondi; Alessio Boattini; Ilaria Boschi; Francesca Brisighelli; Carla Maria Caló; Marilisa Carta; Valentina Coia; Laura Corrias; Federica Crivellaro; Sara De Fanti; Valentina Dominici; Gianmarco Ferri; Paolo Francalacci; Zelda Alice Franceschi; Donata Luiselli; Laura Morelli; Giorgio Paoli; Olga Rickards; Renato Robledo; Daria Sanna; Emanuele Sanna; Stefania Sarno; Luca Sineo; Luca Taglioli; Giuseppe Tagarelli; Sergio Tofanelli; Giuseppe Vona; Davide Pettener; Giovanni Destro Bisol
Journal:  J Anthropol Sci       Date:  2014-03-03

4.  mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters.

Authors:  Hákon Jónsson; Aurélien Ginolhac; Mikkel Schubert; Philip L F Johnson; Ludovic Orlando
Journal:  Bioinformatics       Date:  2013-04-23       Impact factor: 6.937

5.  Optimal Ancient DNA Yields from the Inner Ear Part of the Human Petrous Bone.

Authors:  Ron Pinhasi; Daniel Fernandes; Kendra Sirak; Mario Novak; Sarah Connell; Songül Alpaslan-Roodenberg; Fokke Gerritsen; Vyacheslav Moiseyev; Andrey Gromov; Pál Raczky; Alexandra Anders; Michael Pietrusewsky; Gary Rollefson; Marija Jovanovic; Hiep Trinhhoang; Guy Bar-Oz; Marc Oxenham; Hirofumi Matsumura; Michael Hofreiter
Journal:  PLoS One       Date:  2015-06-18       Impact factor: 3.240

6.  Comparing Ancient DNA Preservation in Petrous Bone and Tooth Cementum.

Authors:  Henrik B Hansen; Peter B Damgaard; Ashot Margaryan; Jesper Stenderup; Niels Lynnerup; Eske Willerslev; Morten E Allentoft
Journal:  PLoS One       Date:  2017-01-27       Impact factor: 3.240

7.  Population structure of modern-day Italians reveals patterns of ancient and archaic ancestries in Southern Europe.

Authors:  A Raveane; S Aneli; F Montinaro; G Athanasiadis; S Barlera; G Birolo; G Boncoraglio; A M Di Blasio; C Di Gaetano; L Pagani; S Parolo; P Paschou; A Piazza; G Stamatoyannopoulos; A Angius; N Brucato; F Cucca; G Hellenthal; A Mulas; M Peyret-Guzzon; M Zoledziewska; A Baali; C Bycroft; M Cherkaoui; J Chiaroni; J Di Cristofaro; C Dina; J M Dugoujon; P Galan; J Giemza; T Kivisild; S Mazieres; M Melhaoui; M Metspalu; S Myers; L Pereira; F X Ricaut; F Brisighelli; I Cardinali; V Grugni; H Lancioni; V L Pascali; A Torroni; O Semino; G Matullo; A Achilli; A Olivieri; C Capelli
Journal:  Sci Adv       Date:  2019-09-04       Impact factor: 14.136

8.  Genomic history of the Italian population recapitulates key evolutionary dynamics of both Continental and Southern Europeans.

Authors:  Marco Sazzini; Paolo Abondio; Stefania Sarno; Guido Alberto Gnecchi-Ruscone; Matteo Ragno; Cristina Giuliani; Sara De Fanti; Claudia Ojeda-Granados; Alessio Boattini; Julien Marquis; Armand Valsesia; Jerome Carayol; Frederic Raymond; Chiara Pirazzini; Elena Marasco; Alberto Ferrarini; Luciano Xumerle; Sebastiano Collino; Daniela Mari; Beatrice Arosio; Daniela Monti; Giuseppe Passarino; Patrizia D'Aquila; Davide Pettener; Donata Luiselli; Gastone Castellani; Massimo Delledonne; Patrick Descombes; Claudio Franceschi; Paolo Garagnani
Journal:  BMC Biol       Date:  2020-05-22       Impact factor: 7.431

9.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

10.  New population and phylogenetic features of the internal variation within mitochondrial DNA macro-haplogroup R0.

Authors:  Vanesa Alvarez-Iglesias; Ana Mosquera-Miguel; Maria Cerezo; Beatriz Quintáns; Maria Teresa Zarrabeitia; Ivon Cuscó; Maria Victoria Lareu; Oscar García; Luis Pérez-Jurado; Angel Carracedo; Antonio Salas
Journal:  PLoS One       Date:  2009-04-02       Impact factor: 3.240

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  1 in total

1.  Ancient and Archaic Genomes.

Authors:  Stefania Vai; Martina Lari; David Caramelli
Journal:  Genes (Basel)       Date:  2021-09-13       Impact factor: 4.096

  1 in total

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