Literature DB >> 22227387

Thermodynamic measurements of bilayer insertion of a single transmembrane helix chaperoned by fluorinated surfactants.

Alexander Kyrychenko1, Mykola V Rodnin, Yevgen O Posokhov, Andrea Holt, Bernard Pucci, J Antoinette Killian, Alexey S Ladokhin.   

Abstract

Accurate determination of the free energy of transfer of a helical segment from an aqueous into a transmembrane (TM) conformation is essential for understanding and predicting the folding and stability of membrane proteins. Until recently, direct thermodynamically sound measurements of free energy of insertion of hydrophobic TM peptides were impossible due to peptide aggregation outside the lipid bilayer. Here, we overcome this problem by using fluorinated surfactants that are capable of preventing aggregation but, unlike detergents, do not themselves interact with the bilayer. We have applied the fluorescence correlation spectroscopy methodology to study surfactant-chaperoned insertion into preformed POPC (palmitoyloleoylphosphatidylcholine) vesicles of the two well-studied dye-labeled TM peptides of different lengths: WALP23 and WALP27. Extrapolation of the apparent free-energy values measured in the presence of surfactants to a zero surfactant concentration yielded free-energy values of -9.0±0.1 and -10.0±0.1 kcal/mol for insertion of WALP23 and WALP27, respectively. Circular dichroism measurements confirmed helical structure of peptides in lipid bilayer, in the presence of surfactants, and in aqueous mixtures of organic solvents. From a combination of thermodynamic and conformational measurements, we conclude that the partitioning of a four-residue L-A-L-A segment in the context of a continuous helical conformation from an aqueous environment into the hydrocarbon core of the membrane has a favorable free energy of 1 kcal/mol. Our measurements, combined with the predictions of two independent experimental hydrophobicity scales, indicate that the per-residue cost of transfer of the helical backbone from water to the hydrocarbon core of the lipid bilayer is unfavorable and is equal to +2.13±0.17 kcal/mol.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 22227387      PMCID: PMC3273640          DOI: 10.1016/j.jmb.2011.12.037

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  55 in total

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Authors:  S H White; A S Ladokhin; S Jayasinghe; K Hristova
Journal:  J Biol Chem       Date:  2001-06-29       Impact factor: 5.157

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Authors:  Tom A Rapoport; Veit Goder; Sven U Heinrich; Kent E S Matlack
Journal:  Trends Cell Biol       Date:  2004-10       Impact factor: 20.808

3.  A monomeric membrane peptide that lives in three worlds: in solution, attached to, and inserted across lipid bilayers.

Authors:  Yana K Reshetnyak; Michael Segala; Oleg A Andreev; Donald M Engelman
Journal:  Biophys J       Date:  2007-06-08       Impact factor: 4.033

Review 4.  Experimentally determined hydrophobicity scale for proteins at membrane interfaces.

Authors:  W C Wimley; S H White
Journal:  Nat Struct Biol       Date:  1996-10

Review 5.  Peptides in lipid bilayers: the power of simple models.

Authors:  J Antoinette Killian; Thomas K M Nyholm
Journal:  Curr Opin Struct Biol       Date:  2006-07-07       Impact factor: 6.809

Review 6.  Lipid-protein interactions drive membrane protein topogenesis in accordance with the positive inside rule.

Authors:  Mikhail Bogdanov; Jun Xie; William Dowhan
Journal:  J Biol Chem       Date:  2008-12-12       Impact factor: 5.157

7.  Interactions of fluorinated surfactants with diphtheria toxin T-domain: testing new media for studies of membrane proteins.

Authors:  Mykola V Rodnin; Yevgen O Posokhov; Christiane Contino-Pépin; Joshua Brettmann; Alexander Kyrychenko; Sergiy S Palchevskyy; Bernard Pucci; Alexey S Ladokhin
Journal:  Biophys J       Date:  2008-02-29       Impact factor: 4.033

Review 8.  Helix insertion into bilayers and the evolution of membrane proteins.

Authors:  Robert Renthal
Journal:  Cell Mol Life Sci       Date:  2009-12-29       Impact factor: 9.261

Review 9.  Biogenesis of tail-anchored proteins: the beginning for the end?

Authors:  Catherine Rabu; Volker Schmid; Blanche Schwappach; Stephen High
Journal:  J Cell Sci       Date:  2009-10-15       Impact factor: 5.285

10.  Folding amphipathic helices into membranes: amphiphilicity trumps hydrophobicity.

Authors:  Mónica Fernández-Vidal; Sajith Jayasinghe; Alexey S Ladokhin; Stephen H White
Journal:  J Mol Biol       Date:  2007-05-22       Impact factor: 5.469

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  8 in total

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Authors:  Victor Vasquez-Montes; Janessa Gerhart; Kelly E King; Damien Thévenin; Alexey S Ladokhin
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2.  Structural plasticity in the topology of the membrane-interacting domain of HIV-1 gp41.

Authors:  Alexander Kyrychenko; J Alfredo Freites; Jing He; Douglas J Tobias; William C Wimley; Alexey S Ladokhin
Journal:  Biophys J       Date:  2014-02-04       Impact factor: 4.033

3.  How lipid headgroups sense the membrane environment: an application of ¹⁴N NMR.

Authors:  Jacques P F Doux; Benjamin A Hall; J Antoinette Killian
Journal:  Biophys J       Date:  2012-09-19       Impact factor: 4.033

4.  Following Natures Lead: On the Construction of Membrane-Inserted Toxins in Lipid Bilayer Nanodiscs.

Authors:  Narahari Akkaladevi; Srayanta Mukherjee; Hiroo Katayama; Blythe Janowiak; Deepa Patel; Edward P Gogol; Bradley L Pentelute; R John Collier; Mark T Fisher
Journal:  J Membr Biol       Date:  2015-01-13       Impact factor: 1.843

5.  Folding and Misfolding of Human Membrane Proteins in Health and Disease: From Single Molecules to Cellular Proteostasis.

Authors:  Justin T Marinko; Hui Huang; Wesley D Penn; John A Capra; Jonathan P Schlebach; Charles R Sanders
Journal:  Chem Rev       Date:  2019-01-04       Impact factor: 60.622

Review 6.  Life at the border: adaptation of proteins to anisotropic membrane environment.

Authors:  Irina D Pogozheva; Henry I Mosberg; Andrei L Lomize
Journal:  Protein Sci       Date:  2014-07-02       Impact factor: 6.725

7.  Conformational switching, refolding and membrane insertion of the diphtheria toxin translocation domain.

Authors:  Alexey S Ladokhin; Alexander Kyrychenko; Mykola V Rodnin; Victor Vasquez-Montes
Journal:  Methods Enzymol       Date:  2021-02-02       Impact factor: 1.600

Review 8.  Towards a Quantitative Understanding of Protein-Lipid Bilayer Interactions at the Single Molecule Level: Opportunities and Challenges.

Authors:  Gavin M King; Ioan Kosztin
Journal:  J Membr Biol       Date:  2020-11-16       Impact factor: 1.843

  8 in total

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