Literature DB >> 18310255

Interactions of fluorinated surfactants with diphtheria toxin T-domain: testing new media for studies of membrane proteins.

Mykola V Rodnin1, Yevgen O Posokhov, Christiane Contino-Pépin, Joshua Brettmann, Alexander Kyrychenko, Sergiy S Palchevskyy, Bernard Pucci, Alexey S Ladokhin.   

Abstract

The principal difficulty in experimental exploration of the folding and stability of membrane proteins (MPs) is their aggregation outside of the native environment of the lipid bilayer. To circumvent this problem, we recently applied fluorinated nondetergent surfactants that act as chemical chaperones. The ideal chaperone surfactant would 1), maintain the MP in solution; 2), minimally perturb the MP's structure; 3), dissociate from the MP during membrane insertion; and 4), not partition into the lipid bilayer. Here, we compare how surfactants with hemifluorinated (HFTAC) and completely fluorinated (FTAC) hydrophobic chains of different length compare to this ideal. Using fluorescence correlation spectroscopy of dye-labeled FTAC and HFTAC, we demonstrate that neither type of surfactant will bind lipid vesicles. Thus, unlike detergents, fluorinated surfactants do not compromise vesicle integrity even at concentrations far in excess of their critical micelle concentration. We examined the interaction of surfactants with a model MP, DTT, using a variety of spectroscopic techniques. Site-selective labeling of DTT with fluorescent dyes indicates that the surfactants do not interact with DTT uniformly, instead concentrating in the most hydrophobic patches. Circular dichroism measurements suggest that the presence of surfactants does not alter the structure of DTT. However, the cooperativity of the thermal unfolding transition is reduced by the presence of surfactants, especially above the critical micelle concentration (a feature of regular detergents, too). The linear dependence of DTT's enthalpy of unfolding on the surfactant concentration is encouraging for future application of (H)FTACs to determine the stability of the membrane-competent conformations of other MPs. The observed reduction in the efficiency of Förster resonance energy transfer between donor-labeled (H)FTACs and acceptor-labeled DTT upon addition of lipid vesicles indicates that the protein sheds the layer of surfactant during its bilayer insertion. We discuss the advantages of fluorinated surfactants over other types of solubilizing agents, with a specific emphasis on their possible applications in thermodynamic measurements.

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Year:  2008        PMID: 18310255      PMCID: PMC2480697          DOI: 10.1529/biophysj.107.126235

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  44 in total

1.  Translocation of the catalytic domain of diphtheria toxin across planar phospholipid bilayers by its own T domain.

Authors:  K J Oh; L Senzel; R J Collier; A Finkelstein
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

2.  Protein chemistry at membrane interfaces: non-additivity of electrostatic and hydrophobic interactions.

Authors:  A S Ladokhin; S H White
Journal:  J Mol Biol       Date:  2001-06-08       Impact factor: 5.469

Review 3.  Ultrasensitive investigations of biological systems by fluorescence correlation spectroscopy.

Authors:  Elke Haustein; Petra Schwille
Journal:  Methods       Date:  2003-02       Impact factor: 3.608

Review 4.  French swimwear for membrane proteins.

Authors:  Charles R Sanders; Amy Kuhn Hoffmann; Don N Gray; Melvin H Keyes; Charles D Ellis
Journal:  Chembiochem       Date:  2004-04-02       Impact factor: 3.164

Review 5.  Cotranslational membrane protein biogenesis at the endoplasmic reticulum.

Authors:  Nathan N Alder; Arthur E Johnson
Journal:  J Biol Chem       Date:  2004-03-17       Impact factor: 5.157

Review 6.  Membrane-protein integration and the role of the translocation channel.

Authors:  Tom A Rapoport; Veit Goder; Sven U Heinrich; Kent E S Matlack
Journal:  Trends Cell Biol       Date:  2004-10       Impact factor: 20.808

7.  Chaperoning of insertion of membrane proteins into lipid bilayers by hemifluorinated surfactants: application to diphtheria toxin.

Authors:  Sergiy S Palchevskyy; Yevgen O Posokhov; Blandine Olivier; Jean-Luc Popot; Bernard Pucci; Alexey S Ladokhin
Journal:  Biochemistry       Date:  2006-02-28       Impact factor: 3.162

Review 8.  Insights into membrane insertion based on studies of colicins.

Authors:  M W Parker; A D Tucker; D Tsernoglou; F Pattus
Journal:  Trends Biochem Sci       Date:  1990-04       Impact factor: 13.807

Review 9.  Amphipols: polymeric surfactants for membrane biology research.

Authors:  J-L Popot; E A Berry; D Charvolin; C Creuzenet; C Ebel; D M Engelman; M Flötenmeyer; F Giusti; Y Gohon; Q Hong; J H Lakey; K Leonard; H A Shuman; P Timmins; D E Warschawski; F Zito; M Zoonens; B Pucci; C Tribet
Journal:  Cell Mol Life Sci       Date:  2003-08       Impact factor: 9.261

10.  Dynamics of membrane protein/amphipol association studied by Förster resonance energy transfer: implications for in vitro studies of amphipol-stabilized membrane proteins.

Authors:  Manuela Zoonens; Fabrice Giusti; Francesca Zito; Jean-Luc Popot
Journal:  Biochemistry       Date:  2007-08-18       Impact factor: 3.162

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  23 in total

1.  FCS study of the thermodynamics of membrane protein insertion into the lipid bilayer chaperoned by fluorinated surfactants.

Authors:  Yevgen O Posokhov; Mykola V Rodnin; Somes K Das; Bernard Pucci; Alexey S Ladokhin
Journal:  Biophys J       Date:  2008-08-15       Impact factor: 4.033

2.  Micellar and biochemical properties of (hemi)fluorinated surfactants are controlled by the size of the polar head.

Authors:  Cécile Breyton; Frank Gabel; Maher Abla; Yves Pierre; Florence Lebaupain; Grégory Durand; Jean-Luc Popot; Christine Ebel; Bernard Pucci
Journal:  Biophys J       Date:  2009-08-19       Impact factor: 4.033

3.  Detergent-activated BAX protein is a monomer.

Authors:  Olena Ivashyna; Ana J García-Sáez; Jonas Ries; Eric T Christenson; Petra Schwille; Paul H Schlesinger
Journal:  J Biol Chem       Date:  2009-06-29       Impact factor: 5.157

4.  The pH-Dependent Trigger in Diphtheria Toxin T Domain Comes with a Safety Latch.

Authors:  Mykola V Rodnin; Jing Li; Michael L Gross; Alexey S Ladokhin
Journal:  Biophys J       Date:  2016-11-01       Impact factor: 4.033

5.  Folding of diphtheria toxin T-domain in the presence of amphipols and fluorinated surfactants: Toward thermodynamic measurements of membrane protein folding.

Authors:  Alexander Kyrychenko; Mykola V Rodnin; Mauricio Vargas-Uribe; Shivaji K Sharma; Grégory Durand; Bernard Pucci; Jean-Luc Popot; Alexey S Ladokhin
Journal:  Biochim Biophys Acta       Date:  2011-09-17

6.  Crucial role of H322 in folding of the diphtheria toxin T-domain into the open-channel state.

Authors:  Mauricio Vargas-Uribe; Mykola V Rodnin; Paul Kienker; Alan Finkelstein; Alexey S Ladokhin
Journal:  Biochemistry       Date:  2013-05-09       Impact factor: 3.162

7.  Conformational switching of the diphtheria toxin T domain.

Authors:  Mykola V Rodnin; Alexander Kyrychenko; Paul Kienker; Onkar Sharma; Yevgen O Posokhov; R John Collier; Alan Finkelstein; Alexey S Ladokhin
Journal:  J Mol Biol       Date:  2010-07-21       Impact factor: 5.469

8.  Refining Protein Penetration into the Lipid Bilayer Using Fluorescence Quenching and Molecular Dynamics Simulations: The Case of Diphtheria Toxin Translocation Domain.

Authors:  Alexander Kyrychenko; Nathan M Lim; Victor Vasquez-Montes; Mykola V Rodnin; J Alfredo Freites; Linh P Nguyen; Douglas J Tobias; David L Mobley; Alexey S Ladokhin
Journal:  J Membr Biol       Date:  2018-03-17       Impact factor: 1.843

9.  Hydrogenated and fluorinated surfactants derived from Tris(hydroxymethyl)-acrylamidomethane allow the purification of a highly active yeast F1-F0 ATP-synthase with an enhanced stability.

Authors:  Jean-Claude Talbot; Alain Dautant; Ange Polidori; Bernard Pucci; Touria Cohen-Bouhacina; Abdelhamid Maali; Bénédicte Salin; Daniel Brèthes; Jean Velours; Marie-France Giraud
Journal:  J Bioenerg Biomembr       Date:  2009-10-10       Impact factor: 2.945

10.  Calibration of Distribution Analysis of the Depth of Membrane Penetration Using Simulations and Depth-Dependent Fluorescence Quenching.

Authors:  Alexander Kyrychenko; Mykola V Rodnin; Alexey S Ladokhin
Journal:  J Membr Biol       Date:  2014-08-09       Impact factor: 1.843

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