Literature DB >> 33712192

Conformational switching, refolding and membrane insertion of the diphtheria toxin translocation domain.

Alexey S Ladokhin1, Alexander Kyrychenko2, Mykola V Rodnin3, Victor Vasquez-Montes3.   

Abstract

Diphtheria toxin is among many bacterial toxins that utilize the endosomal pathway of cellular entry, which is ensured by the bridging of the endosomal membrane by the toxin's translocation (T) domain. Endosomal acidification triggers a series of conformational changes of the T-domain, that take place first in aqueous and subsequently in membranous milieu. These rearrangements ultimately result in establishing membrane-inserted conformation(s) and translocation of the catalytic moiety of the toxin into the cytoplasm. We discuss here the strategy for combining site-selective labeling with various spectroscopic methods to characterize structural and thermodynamic aspects of protonation-dependent conformational switching and membrane insertion of the diphtheria toxin T-domain. Among the discussed methods are FRET, FCS and depth-dependent fluorescence quenching with lipid-attached bromine atoms and spin probes. The membrane-insertion pathway of the T-domain contains multiple intermediates and is governed by staggered pH-dependent transitions involving protonation of histidines and acidic residues. Presented data demonstrate that the lipid bilayer plays an active part in T-domain functioning and that the so-called Open-Channel State does not constitute the translocation pathway, but is likely to be a byproduct of the translocation. The spectroscopic approaches presented here are broadly applicable to many other systems of physiological and biomedical interest for which conformational changes can lead to membrane insertion (e.g., other bacterial toxins, host defense peptides, tumor-targeting pHLIP peptides and members of Bcl-2 family of apoptotic regulators).
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Diphtheria toxin; Distribution analysis of depth-dependent quenching; FRET; Fluorescence correlation spectroscopy; Fluorescence quenching; Fluorescence spectroscopy; Lipid bilayer insertion; Membrane protein; Thermodynamics

Mesh:

Substances:

Year:  2021        PMID: 33712192      PMCID: PMC8528022          DOI: 10.1016/bs.mie.2020.12.016

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  82 in total

1.  Site-directed spin labeling of proteins. Applications to diphtheria toxin.

Authors:  K J Oh; C Altenbach; R J Collier; W L Hubbell
Journal:  Methods Mol Biol       Date:  2000

2.  Topography of helices 5-7 in membrane-inserted diphtheria toxin T domain: identification and insertion boundaries of two hydrophobic sequences that do not form a stable transmembrane hairpin.

Authors:  Michael P Rosconi; Erwin London
Journal:  J Biol Chem       Date:  2002-02-21       Impact factor: 5.157

3.  Behavior of the N-terminal helices of the diphtheria toxin T domain during the successive steps of membrane interaction.

Authors:  Caroline Montagner; Aurélie Perier; Sylvain Pichard; Grégory Vernier; André Ménez; Daniel Gillet; Vincent Forge; Alexandre Chenal
Journal:  Biochemistry       Date:  2007-01-24       Impact factor: 3.162

Review 4.  Border crossings: colicins and transporters.

Authors:  Karen S Jakes; William A Cramer
Journal:  Annu Rev Genet       Date:  2012-08-28       Impact factor: 16.830

5.  Quantification of alpha-synuclein binding to lipid vesicles using fluorescence correlation spectroscopy.

Authors:  Elizabeth Rhoades; Trudy F Ramlall; Watt W Webb; David Eliezer
Journal:  Biophys J       Date:  2006-03-31       Impact factor: 4.033

6.  Refining Protein Penetration into the Lipid Bilayer Using Fluorescence Quenching and Molecular Dynamics Simulations: The Case of Diphtheria Toxin Translocation Domain.

Authors:  Alexander Kyrychenko; Nathan M Lim; Victor Vasquez-Montes; Mykola V Rodnin; J Alfredo Freites; Linh P Nguyen; Douglas J Tobias; David L Mobley; Alexey S Ladokhin
Journal:  J Membr Biol       Date:  2018-03-17       Impact factor: 1.843

Review 7.  Anthrax toxin.

Authors:  R John Collier; John A T Young
Journal:  Annu Rev Cell Dev Biol       Date:  2003       Impact factor: 13.827

8.  Microsecond Simulations of the Diphtheria Toxin Translocation Domain in Association with Anionic Lipid Bilayers.

Authors:  Jose C Flores-Canales; Maria Kurnikova
Journal:  J Phys Chem B       Date:  2015-08-31       Impact factor: 2.991

9.  Analysis of protein and peptide penetration into membranes by depth-dependent fluorescence quenching: theoretical considerations.

Authors:  A S Ladokhin
Journal:  Biophys J       Date:  1999-02       Impact factor: 4.033

Review 10.  Mechanism of diphtheria toxin catalytic domain delivery to the eukaryotic cell cytosol and the cellular factors that directly participate in the process.

Authors:  John R Murphy
Journal:  Toxins (Basel)       Date:  2011-03-21       Impact factor: 4.546

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  1 in total

1.  Ca2+ -dependent interactions between lipids and the tumor-targeting peptide pHLIP.

Authors:  Victor Vasquez-Montes; Vivek Tyagi; Eden Sikorski; Alexander Kyrychenko; J Alfredo Freites; Damien Thévenin; Douglas J Tobias; Alexey S Ladokhin
Journal:  Protein Sci       Date:  2022-09       Impact factor: 6.993

  1 in total

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