Literature DB >> 17532340

Folding amphipathic helices into membranes: amphiphilicity trumps hydrophobicity.

Mónica Fernández-Vidal1, Sajith Jayasinghe, Alexey S Ladokhin, Stephen H White.   

Abstract

High amphiphilicity is a hallmark of interfacial helices in membrane proteins and membrane-active peptides, such as toxins and antimicrobial peptides. Although there is general agreement that amphiphilicity is important for membrane-interface binding, an unanswered question is its importance relative to simple hydrophobicity-driven partitioning. We have examined this fundamental question using measurements of the interfacial partitioning of a family of 17-residue amidated-acetylated peptides into both neutral and anionic lipid vesicles. Composed only of Ala, Leu, and Gln residues, the amino acid sequences of the peptides were varied to change peptide amphiphilicity without changing total hydrophobicity. We found that peptide helicity in water and interface increased linearly with hydrophobic moment, as did the favorable peptide partitioning free energy. This observation provides simple tools for designing amphipathic helical peptides. Finally, our results show that helical amphiphilicity is far more important for interfacial binding than simple hydrophobicity.

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Year:  2007        PMID: 17532340      PMCID: PMC2034331          DOI: 10.1016/j.jmb.2007.05.016

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  55 in total

Review 1.  Structural features of helical antimicrobial peptides: their potential to modulate activity on model membranes and biological cells.

Authors:  M Dathe; T Wieprecht
Journal:  Biochim Biophys Acta       Date:  1999-12-15

Review 2.  The relationship between sequence and structure in elementary folding units.

Authors:  L Serrano
Journal:  Adv Protein Chem       Date:  2000

Review 3.  Amphipathic, alpha-helical antimicrobial peptides.

Authors:  A Tossi; L Sandri; A Giangaspero
Journal:  Biopolymers       Date:  2000       Impact factor: 2.505

4.  Protein chemistry at membrane interfaces: non-additivity of electrostatic and hydrophobic interactions.

Authors:  A S Ladokhin; S H White
Journal:  J Mol Biol       Date:  2001-06-08       Impact factor: 5.469

5.  Origin of the different strengths of the (i,i+4) and (i,i+3) leucine pair interactions in helices.

Authors:  Peizhi Luo; Robert L Baldwin
Journal:  Biophys Chem       Date:  2002-05-02       Impact factor: 2.352

6.  Thermodynamics of fusion peptide-membrane interactions.

Authors:  Yinling Li; Xing Han; Lukas K Tamm
Journal:  Biochemistry       Date:  2003-06-17       Impact factor: 3.162

7.  Thermodynamics of the alpha-helix-coil transition of amphipathic peptides in a membrane environment: implications for the peptide-membrane binding equilibrium.

Authors:  T Wieprecht; O Apostolov; M Beyermann; J Seelig
Journal:  J Mol Biol       Date:  1999-12-03       Impact factor: 5.469

8.  Discovering structural correlations in alpha-helices.

Authors:  T M Klingler; D L Brutlag
Journal:  Protein Sci       Date:  1994-10       Impact factor: 6.725

Review 9.  Structure-activity studies on magainins and other host defense peptides.

Authors:  W L Maloy; U P Kari
Journal:  Biopolymers       Date:  1995       Impact factor: 2.505

10.  How to measure and analyze tryptophan fluorescence in membranes properly, and why bother?

Authors:  A S Ladokhin; S Jayasinghe; S H White
Journal:  Anal Biochem       Date:  2000-10-15       Impact factor: 3.365

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  64 in total

1.  Effect of sequence hydrophobicity and bilayer width upon the minimum length required for the formation of transmembrane helices in membranes.

Authors:  Shyam S Krishnakumar; Erwin London
Journal:  J Mol Biol       Date:  2007-09-20       Impact factor: 5.469

2.  FCS study of the thermodynamics of membrane protein insertion into the lipid bilayer chaperoned by fluorinated surfactants.

Authors:  Yevgen O Posokhov; Mykola V Rodnin; Somes K Das; Bernard Pucci; Alexey S Ladokhin
Journal:  Biophys J       Date:  2008-08-15       Impact factor: 4.033

3.  Effects of D-Lysine Substitutions on the Activity and Selectivity of Antimicrobial Peptide CM15.

Authors:  Heather M Kaminski; Jimmy B Feix
Journal:  Polymers (Basel)       Date:  2011-12-06       Impact factor: 4.329

4.  Interaction of 18-residue peptides derived from amphipathic helical segments of globular proteins with model membranes.

Authors:  Chandrasekaran Sivakamasundari; Ramakrishnan Nagaraj
Journal:  J Biosci       Date:  2009-06       Impact factor: 1.826

5.  MPEx: a tool for exploring membrane proteins.

Authors:  Craig Snider; Sajith Jayasinghe; Kalina Hristova; Stephen H White
Journal:  Protein Sci       Date:  2009-12       Impact factor: 6.725

Review 6.  Membrane-active peptides: binding, translocation, and flux in lipid vesicles.

Authors:  Paulo F Almeida
Journal:  Biochim Biophys Acta       Date:  2014-04-25

7.  Mechanism of membrane curvature sensing by amphipathic helix containing proteins.

Authors:  Haosheng Cui; Edward Lyman; Gregory A Voth
Journal:  Biophys J       Date:  2011-03-02       Impact factor: 4.033

8.  Thermodynamics of RTA3 peptide binding to membranes and consequences for antimicrobial activity.

Authors:  Ayman Hawrani; Robin A Howe; Timothy R Walsh; Christopher E Dempsey
Journal:  Biochim Biophys Acta       Date:  2010-03-24

9.  Is lipid bilayer binding a common property of inhibitor cysteine knot ion-channel blockers?

Authors:  Yevgen O Posokhov; Philip A Gottlieb; Michael J Morales; Frederick Sachs; Alexey S Ladokhin
Journal:  Biophys J       Date:  2007-06-15       Impact factor: 4.033

10.  Energetics of peptide (pHLIP) binding to and folding across a lipid bilayer membrane.

Authors:  Yana K Reshetnyak; Oleg A Andreev; Michael Segala; Vladislav S Markin; Donald M Engelman
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-30       Impact factor: 11.205

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