Literature DB >> 22221832

Synthetic biological approaches to natural product biosynthesis.

Jaclyn M Winter1, Yi Tang.   

Abstract

Small molecules produced in Nature possess exquisite chemical diversity and continue to be an inspiration for the development of new therapeutic agents. In their host organisms, natural products are assembled and modified using dedicated biosynthetic pathways. By rationally reprogramming and manipulating these pathways, unnatural metabolites containing enhanced structural features that were otherwise inaccessible can be obtained. Additionally, new chemical entities can be synthesized by developing the enzymes that carry out these complicated chemical reactions into biocatalysts. In this review, we will discuss a variety of combinatorial biosynthetic strategies, their technical challenges, and highlight some recent (since 2007) examples of rationally designed metabolites, as well as platforms that have been established for the production and modification of clinically important pharmaceutical compounds.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22221832      PMCID: PMC3418455          DOI: 10.1016/j.copbio.2011.12.016

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  60 in total

1.  Deciphering biosynthesis of the RNA polymerase inhibitor streptolydigin and generation of glycosylated derivatives.

Authors:  Carlos Olano; Cristina Gómez; María Pérez; Martina Palomino; Antonio Pineda-Lucena; Rodrigo J Carbajo; Alfredo F Braña; Carmen Méndez; José A Salas
Journal:  Chem Biol       Date:  2009-10-30

2.  The Catalytic Diversity of Multimodular Polyketide Synthases: Natural Product Biosynthesis Beyond Textbook Assembly Rules.

Authors:  Tobias A M Gulder; Michael F Freeman; Jörn Piel
Journal:  Top Curr Chem       Date:  2011-03-01

3.  Biosynthesis of complex polyketides in a metabolically engineered strain of E. coli.

Authors:  B A Pfeifer; S J Admiraal; H Gramajo; D E Cane; C Khosla
Journal:  Science       Date:  2001-03-02       Impact factor: 47.728

Review 4.  Metabolic engineering for the production of natural products.

Authors:  Lauren B Pickens; Yi Tang; Yit-Heng Chooi
Journal:  Annu Rev Chem Biomol Eng       Date:  2011       Impact factor: 11.059

5.  Expanding the genetic code of Escherichia coli with phosphoserine.

Authors:  Hee-Sung Park; Michael J Hohn; Takuya Umehara; Li-Tao Guo; Edith M Osborne; Jack Benner; Christopher J Noren; Jesse Rinehart; Dieter Söll
Journal:  Science       Date:  2011-08-26       Impact factor: 47.728

6.  Engineering Escherichia coli for production of functionalized terpenoids using plant P450s.

Authors:  Michelle C Y Chang; Rachel A Eachus; William Trieu; Dae-Kyun Ro; Jay D Keasling
Journal:  Nat Chem Biol       Date:  2007-04-15       Impact factor: 15.040

7.  Development of a genetic system for combinatorial biosynthesis of lipopeptides in Streptomyces fradiae and heterologous expression of the A54145 biosynthesis gene cluster.

Authors:  Dylan C Alexander; Jessica Rock; Xiaowei He; Paul Brian; Vivian Miao; Richard H Baltz
Journal:  Appl Environ Microbiol       Date:  2010-08-27       Impact factor: 4.792

8.  Production of the potent antibacterial polyketide erythromycin C in Escherichia coli.

Authors:  Salvador Peirú; Hugo G Menzella; Eduardo Rodríguez; John Carney; Hugo Gramajo
Journal:  Appl Environ Microbiol       Date:  2005-05       Impact factor: 4.792

9.  Exploiting enzymatic promiscuity to engineer a focused library of highly selective antifungal and antiproliferative aureothin analogues.

Authors:  Martina Werneburg; Benjamin Busch; Jing He; Martin E A Richter; Longkuan Xiang; Bradley S Moore; Martin Roth; Hans-Martin Dahse; Christian Hertweck
Journal:  J Am Chem Soc       Date:  2010-08-04       Impact factor: 15.419

10.  Engineered biosynthesis of bacterial aromatic polyketides in Escherichia coli.

Authors:  Wenjun Zhang; Yanran Li; Yi Tang
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-15       Impact factor: 11.205

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  25 in total

1.  Expanding the structural diversity of polyketides by exploring the cofactor tolerance of an inline methyltransferase domain.

Authors:  Jaclyn M Winter; Grace Chiou; Ian R Bothwell; Wei Xu; Neil K Garg; Minkui Luo; Yi Tang
Journal:  Org Lett       Date:  2013-07-09       Impact factor: 6.005

Review 2.  Synthetic biology of antimicrobial discovery.

Authors:  Bijan Zakeri; Timothy K Lu
Journal:  ACS Synth Biol       Date:  2012-12-04       Impact factor: 5.110

Review 3.  Recent advances in natural product discovery.

Authors:  Yunzi Luo; Ryan E Cobb; Huimin Zhao
Journal:  Curr Opin Biotechnol       Date:  2014-09-26       Impact factor: 9.740

4.  Identification of Middle Chain Fatty Acyl-CoA Ligase Responsible for the Biosynthesis of 2-Alkylmalonyl-CoAs for Polyketide Extender Unit.

Authors:  Takeshi Miyazawa; Shunji Takahashi; Akihiro Kawata; Suresh Panthee; Teruo Hayashi; Takeshi Shimizu; Toshihiko Nogawa; Hiroyuki Osada
Journal:  J Biol Chem       Date:  2015-09-16       Impact factor: 5.157

5.  Clinical efficacy of implementing Bio Immune(G)ene MEDicine in the treatment of chronic asthma with the objective of reducing or removing effectively corticosteroid therapy: A novel approach and promising results.

Authors:  Gilbert Glady
Journal:  Exp Ther Med       Date:  2018-04-02       Impact factor: 2.447

6.  Diversity-oriented combinatorial biosynthesis of benzenediol lactone scaffolds by subunit shuffling of fungal polyketide synthases.

Authors:  Yuquan Xu; Tong Zhou; Shuwei Zhang; Patricia Espinosa-Artiles; Luoyi Wang; Wei Zhang; Min Lin; A A Leslie Gunatilaka; Jixun Zhan; István Molnár
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-21       Impact factor: 11.205

7.  Production of bioactive diterpenoids in the euphorbiaceae depends on evolutionarily conserved gene clusters.

Authors:  Andrew J King; Geoffrey D Brown; Alison D Gilday; Tony R Larson; Ian A Graham
Journal:  Plant Cell       Date:  2014-08-29       Impact factor: 11.277

8.  Genetic engineering combined with random mutagenesis to enhance G418 production in Micromonospora echinospora.

Authors:  Xianpu Ni; Zhenpeng Sun; Hongyu Zhang; Han He; Zhouxiang Ji; Huanzhang Xia
Journal:  J Ind Microbiol Biotechnol       Date:  2014-07-17       Impact factor: 3.346

9.  Characterization of a silent azaphilone gene cluster from Aspergillus niger ATCC 1015 reveals a hydroxylation-mediated pyran-ring formation.

Authors:  Angelica O Zabala; Wei Xu; Yit-Heng Chooi; Yi Tang
Journal:  Chem Biol       Date:  2012-08-24

Review 10.  Iterative polyketide biosynthesis by modular polyketide synthases in bacteria.

Authors:  Haotong Chen; Liangcheng Du
Journal:  Appl Microbiol Biotechnol       Date:  2015-11-09       Impact factor: 4.813

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