| Literature DB >> 22220079 |
Augusto Rivera, Dency José Pacheco, Jaime Ríos-Motta, Michaela Pojarová, Michal Dušek.
Abstract
The cyclo-hexane ring in the title compound, C(21)H(24)N(8), adopts a chair conformation and the five-membered heterocyclic ring to which it is fused adopts a twist conformation on their common C-C bond. The substituents on the N atoms of the central five-membered heterocycle are arranged trans with respect to the central ring. The terminalEntities:
Year: 2011 PMID: 22220079 PMCID: PMC3247461 DOI: 10.1107/S160053681104044X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H24N8 | |
| Monoclinic, | Melting point: 424 K |
| Hall symbol: -P 2ybc | Cu |
| Cell parameters from 13493 reflections | |
| θ = 3.2° | |
| µ = 0.68 mm−1 | |
| β = 90.861 (1)° | |
| Plate, colourless | |
| 0.31 × 0.18 × 0.11 mm |
| Oxford Diffraction Xcalibur Atlas Gemini ultra diffractometer | 2990 reflections with |
| Radiation source: Enhance Ultra (Cu) X-ray Source | |
| mirror | θmax = 67.1°, θmin = 3.2° |
| Detector resolution: 10.3784 pixels mm-1 | |
| Rotation method data acquisition using ω scans | |
| 37999 measured reflections | |
| 3461 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3461 reflections | (Δ/σ)max < 0.001 |
| 262 parameters | Δρmax = 0.23 e Å−3 |
| 0 restraints | Δρmin = −0.31 e Å−3 |
| 0 constraints |
| N1 | 0.06576 (12) | 1.3038 (2) | 0.03014 (5) | 0.0301 (4) | |
| N2 | 0.06561 (12) | 1.1599 (2) | 0.06570 (5) | 0.0298 (3) | |
| N3 | 0.12624 (11) | 0.9755 (2) | 0.05292 (5) | 0.0256 (3) | |
| N4 | 0.21777 (12) | 0.7711 (2) | 0.12114 (5) | 0.0277 (3) | |
| N5 | 0.34776 (11) | 0.9703 (2) | 0.16832 (5) | 0.0250 (3) | |
| N6 | 0.31150 (11) | 0.9133 (2) | 0.25550 (5) | 0.0240 (3) | |
| N7 | 0.34948 (11) | 0.7097 (3) | 0.27089 (5) | 0.0296 (4) | |
| N8 | 0.27753 (12) | 0.6222 (3) | 0.30094 (5) | 0.0302 (3) | |
| C1 | 0.12747 (13) | 1.2136 (3) | −0.00732 (6) | 0.0249 (4) | |
| C2 | 0.14940 (14) | 1.3000 (3) | −0.05407 (6) | 0.0293 (4) | |
| H2 | 0.1233 | 1.4406 | −0.0639 | 0.035* | |
| C3 | 0.21134 (15) | 1.1660 (3) | −0.08439 (7) | 0.0332 (4) | |
| H3 | 0.2266 | 1.2157 | −0.1158 | 0.040* | |
| C4 | 0.25227 (15) | 0.9548 (3) | −0.06892 (7) | 0.0334 (4) | |
| H4 | 0.2949 | 0.8705 | −0.0904 | 0.040* | |
| C5 | 0.23166 (14) | 0.8690 (3) | −0.02351 (7) | 0.0299 (4) | |
| H5 | 0.2591 | 0.7296 | −0.0136 | 0.036* | |
| C6 | 0.16690 (13) | 1.0034 (3) | 0.00695 (6) | 0.0239 (4) | |
| C7 | 0.12758 (14) | 0.7809 (3) | 0.08616 (7) | 0.0288 (4) | |
| H7A | 0.0577 | 0.7797 | 0.1038 | 0.035* | |
| H7B | 0.1296 | 0.6450 | 0.0666 | 0.035* | |
| C8 | 0.22853 (13) | 0.9669 (3) | 0.15340 (6) | 0.0270 (4) | |
| H8A | 0.1810 | 0.9509 | 0.1816 | 0.032* | |
| H8B | 0.2083 | 1.1041 | 0.1362 | 0.032* | |
| C9 | 0.33087 (14) | 0.7201 (3) | 0.10497 (6) | 0.0265 (4) | |
| H9 | 0.3541 | 0.8339 | 0.0813 | 0.032* | |
| C10 | 0.35246 (16) | 0.4874 (3) | 0.08427 (7) | 0.0350 (4) | |
| H10A | 0.3126 | 0.4691 | 0.0534 | 0.042* | |
| H10B | 0.3265 | 0.3730 | 0.1067 | 0.042* | |
| C11 | 0.47850 (16) | 0.4632 (3) | 0.07680 (8) | 0.0391 (5) | |
| H11A | 0.5017 | 0.5670 | 0.0515 | 0.047* | |
| H11B | 0.4945 | 0.3117 | 0.0657 | 0.047* | |
| C12 | 0.54586 (16) | 0.5107 (3) | 0.12368 (8) | 0.0391 (5) | |
| H12A | 0.6251 | 0.5020 | 0.1167 | 0.047* | |
| H12B | 0.5292 | 0.3956 | 0.1476 | 0.047* | |
| C13 | 0.51985 (14) | 0.7429 (3) | 0.14530 (7) | 0.0338 (4) | |
| H13A | 0.5590 | 0.7621 | 0.1763 | 0.041* | |
| H13B | 0.5437 | 0.8607 | 0.1233 | 0.041* | |
| C14 | 0.39463 (14) | 0.7551 (3) | 0.15242 (6) | 0.0265 (4) | |
| H14 | 0.3728 | 0.6377 | 0.1755 | 0.032* | |
| C15 | 0.37030 (13) | 1.0415 (3) | 0.21750 (6) | 0.0270 (4) | |
| H15A | 0.3498 | 1.1989 | 0.2204 | 0.032* | |
| H15B | 0.4502 | 1.0302 | 0.2238 | 0.032* | |
| C16 | 0.21029 (13) | 0.9579 (3) | 0.27606 (6) | 0.0235 (4) | |
| C17 | 0.13513 (14) | 1.1384 (3) | 0.27189 (6) | 0.0284 (4) | |
| H17 | 0.1497 | 1.2636 | 0.2526 | 0.034* | |
| C18 | 0.03858 (15) | 1.1180 (3) | 0.29813 (7) | 0.0333 (4) | |
| H18 | −0.0144 | 1.2324 | 0.2960 | 0.040* | |
| C19 | 0.01666 (14) | 0.9313 (3) | 0.32806 (6) | 0.0313 (4) | |
| H19 | −0.0497 | 0.9267 | 0.3454 | 0.038* | |
| C20 | 0.09064 (14) | 0.7563 (3) | 0.33234 (6) | 0.0297 (4) | |
| H20 | 0.0762 | 0.6333 | 0.3523 | 0.036* | |
| C21 | 0.18967 (14) | 0.7708 (3) | 0.30514 (6) | 0.0255 (4) |
| N1 | 0.0331 (8) | 0.0264 (8) | 0.0309 (8) | 0.0061 (6) | −0.0009 (6) | −0.0036 (6) |
| N2 | 0.0288 (7) | 0.0288 (8) | 0.0320 (8) | 0.0062 (6) | 0.0007 (6) | −0.0046 (6) |
| N3 | 0.0240 (7) | 0.0252 (7) | 0.0275 (8) | 0.0008 (5) | 0.0001 (6) | −0.0031 (6) |
| N4 | 0.0231 (7) | 0.0284 (8) | 0.0316 (8) | −0.0020 (5) | −0.0018 (6) | 0.0023 (6) |
| N5 | 0.0199 (7) | 0.0294 (8) | 0.0258 (8) | −0.0033 (5) | 0.0033 (5) | 0.0013 (6) |
| N6 | 0.0203 (6) | 0.0282 (7) | 0.0233 (7) | −0.0007 (5) | 0.0004 (5) | 0.0026 (5) |
| N7 | 0.0238 (7) | 0.0329 (8) | 0.0320 (8) | 0.0046 (6) | 0.0004 (6) | 0.0050 (6) |
| N8 | 0.0263 (7) | 0.0314 (8) | 0.0329 (8) | 0.0032 (6) | 0.0028 (6) | 0.0057 (6) |
| C1 | 0.0228 (8) | 0.0221 (8) | 0.0298 (9) | −0.0012 (6) | −0.0019 (6) | −0.0047 (6) |
| C2 | 0.0281 (8) | 0.0257 (9) | 0.0338 (10) | −0.0039 (7) | −0.0051 (7) | 0.0021 (7) |
| C3 | 0.0281 (9) | 0.0409 (10) | 0.0308 (9) | −0.0068 (7) | 0.0025 (7) | 0.0020 (8) |
| C4 | 0.0283 (9) | 0.0375 (10) | 0.0345 (10) | 0.0027 (7) | 0.0063 (7) | −0.0074 (8) |
| C5 | 0.0267 (8) | 0.0271 (9) | 0.0361 (10) | 0.0033 (7) | 0.0018 (7) | −0.0047 (7) |
| C6 | 0.0204 (7) | 0.0258 (8) | 0.0255 (9) | −0.0025 (6) | −0.0025 (6) | −0.0034 (6) |
| C7 | 0.0256 (8) | 0.0261 (9) | 0.0345 (10) | −0.0034 (6) | −0.0024 (7) | 0.0021 (7) |
| C8 | 0.0218 (8) | 0.0345 (9) | 0.0247 (9) | −0.0010 (7) | 0.0016 (6) | 0.0004 (7) |
| C9 | 0.0249 (8) | 0.0247 (9) | 0.0299 (9) | −0.0019 (6) | 0.0020 (7) | 0.0035 (7) |
| C10 | 0.0373 (10) | 0.0263 (9) | 0.0412 (11) | 0.0003 (7) | −0.0049 (8) | −0.0014 (8) |
| C11 | 0.0403 (11) | 0.0298 (10) | 0.0473 (12) | 0.0066 (8) | 0.0055 (9) | −0.0036 (8) |
| C12 | 0.0282 (9) | 0.0362 (11) | 0.0530 (13) | 0.0040 (8) | 0.0008 (8) | 0.0004 (9) |
| C13 | 0.0230 (9) | 0.0353 (10) | 0.0431 (11) | −0.0004 (7) | 0.0007 (7) | 0.0002 (8) |
| C14 | 0.0236 (8) | 0.0259 (9) | 0.0299 (9) | −0.0024 (6) | 0.0028 (7) | 0.0046 (7) |
| C15 | 0.0223 (8) | 0.0304 (9) | 0.0283 (9) | −0.0073 (6) | 0.0021 (6) | 0.0022 (7) |
| C16 | 0.0204 (8) | 0.0276 (9) | 0.0225 (8) | −0.0011 (6) | −0.0003 (6) | −0.0027 (6) |
| C17 | 0.0319 (9) | 0.0243 (9) | 0.0291 (9) | 0.0023 (7) | 0.0012 (7) | −0.0005 (7) |
| C18 | 0.0324 (9) | 0.0346 (10) | 0.0330 (10) | 0.0088 (7) | 0.0013 (7) | −0.0074 (7) |
| C19 | 0.0252 (8) | 0.0393 (10) | 0.0297 (10) | −0.0011 (7) | 0.0067 (7) | −0.0085 (7) |
| C20 | 0.0284 (9) | 0.0333 (10) | 0.0274 (9) | −0.0055 (7) | 0.0037 (7) | 0.0010 (7) |
| C21 | 0.0247 (8) | 0.0268 (9) | 0.0250 (9) | 0.0005 (6) | 0.0006 (6) | 0.0004 (6) |
| N1—N2 | 1.296 (2) | C8—H8B | 0.9700 |
| N1—C1 | 1.380 (2) | C9—C14 | 1.511 (2) |
| N2—N3 | 1.3619 (19) | C9—C10 | 1.517 (2) |
| N3—C6 | 1.366 (2) | C9—H9 | 0.9800 |
| N3—C7 | 1.471 (2) | C10—C11 | 1.529 (3) |
| N4—C7 | 1.432 (2) | C10—H10A | 0.9700 |
| N4—C9 | 1.460 (2) | C10—H10B | 0.9700 |
| N4—C8 | 1.465 (2) | C11—C12 | 1.531 (3) |
| N5—C15 | 1.433 (2) | C11—H11A | 0.9700 |
| N5—C14 | 1.464 (2) | C11—H11B | 0.9700 |
| N5—C8 | 1.476 (2) | C12—C13 | 1.535 (3) |
| N6—N7 | 1.357 (2) | C12—H12A | 0.9700 |
| N6—C16 | 1.367 (2) | C12—H12B | 0.9700 |
| N6—C15 | 1.476 (2) | C13—C14 | 1.513 (2) |
| N7—N8 | 1.307 (2) | C13—H13A | 0.9700 |
| N8—C21 | 1.378 (2) | C13—H13B | 0.9700 |
| C1—C6 | 1.389 (2) | C14—H14 | 0.9800 |
| C1—C2 | 1.408 (2) | C15—H15A | 0.9700 |
| C2—C3 | 1.375 (3) | C15—H15B | 0.9700 |
| C2—H2 | 0.9300 | C16—C21 | 1.391 (2) |
| C3—C4 | 1.409 (3) | C16—C17 | 1.402 (2) |
| C3—H3 | 0.9300 | C17—C18 | 1.374 (2) |
| C4—C5 | 1.370 (3) | C17—H17 | 0.9300 |
| C4—H4 | 0.9300 | C18—C19 | 1.406 (3) |
| C5—C6 | 1.397 (2) | C18—H18 | 0.9300 |
| C5—H5 | 0.9300 | C19—C20 | 1.369 (3) |
| C7—H7A | 0.9700 | C19—H19 | 0.9300 |
| C7—H7B | 0.9700 | C20—C21 | 1.410 (2) |
| C8—H8A | 0.9700 | C20—H20 | 0.9300 |
| N2—N1—C1 | 108.00 (14) | C9—C10—H10A | 110.1 |
| N1—N2—N3 | 109.32 (13) | C11—C10—H10A | 110.1 |
| N2—N3—C6 | 109.70 (13) | C9—C10—H10B | 110.1 |
| N2—N3—C7 | 118.30 (13) | C11—C10—H10B | 110.1 |
| C6—N3—C7 | 131.64 (14) | H10A—C10—H10B | 108.4 |
| C7—N4—C9 | 119.73 (14) | C10—C11—C12 | 112.13 (16) |
| C7—N4—C8 | 115.44 (13) | C10—C11—H11A | 109.2 |
| C9—N4—C8 | 105.94 (13) | C12—C11—H11A | 109.2 |
| C15—N5—C14 | 118.03 (14) | C10—C11—H11B | 109.2 |
| C15—N5—C8 | 115.53 (13) | C12—C11—H11B | 109.2 |
| C14—N5—C8 | 106.11 (13) | H11A—C11—H11B | 107.9 |
| N7—N6—C16 | 109.79 (13) | C11—C12—C13 | 112.45 (16) |
| N7—N6—C15 | 121.24 (13) | C11—C12—H12A | 109.1 |
| C16—N6—C15 | 128.57 (14) | C13—C12—H12A | 109.1 |
| N8—N7—N6 | 109.28 (13) | C11—C12—H12B | 109.1 |
| N7—N8—C21 | 107.87 (14) | C13—C12—H12B | 109.1 |
| N1—C1—C6 | 108.83 (15) | H12A—C12—H12B | 107.8 |
| N1—C1—C2 | 130.01 (16) | C14—C13—C12 | 107.41 (14) |
| C6—C1—C2 | 121.12 (16) | C14—C13—H13A | 110.2 |
| C3—C2—C1 | 116.57 (16) | C12—C13—H13A | 110.2 |
| C3—C2—H2 | 121.7 | C14—C13—H13B | 110.2 |
| C1—C2—H2 | 121.7 | C12—C13—H13B | 110.2 |
| C2—C3—C4 | 121.44 (17) | H13A—C13—H13B | 108.5 |
| C2—C3—H3 | 119.3 | N5—C14—C9 | 100.73 (13) |
| C4—C3—H3 | 119.3 | N5—C14—C13 | 117.62 (14) |
| C5—C4—C3 | 122.54 (17) | C9—C14—C13 | 111.67 (14) |
| C5—C4—H4 | 118.7 | N5—C14—H14 | 108.8 |
| C3—C4—H4 | 118.7 | C9—C14—H14 | 108.8 |
| C4—C5—C6 | 115.99 (16) | C13—C14—H14 | 108.8 |
| C4—C5—H5 | 122.0 | N5—C15—N6 | 115.18 (13) |
| C6—C5—H5 | 122.0 | N5—C15—H15A | 108.5 |
| N3—C6—C1 | 104.14 (14) | N6—C15—H15A | 108.5 |
| N3—C6—C5 | 133.54 (16) | N5—C15—H15B | 108.5 |
| C1—C6—C5 | 122.31 (16) | N6—C15—H15B | 108.5 |
| N4—C7—N3 | 116.54 (13) | H15A—C15—H15B | 107.5 |
| N4—C7—H7A | 108.2 | N6—C16—C21 | 104.25 (14) |
| N3—C7—H7A | 108.2 | N6—C16—C17 | 133.15 (15) |
| N4—C7—H7B | 108.2 | C21—C16—C17 | 122.59 (15) |
| N3—C7—H7B | 108.2 | C18—C17—C16 | 115.60 (16) |
| H7A—C7—H7B | 107.3 | C18—C17—H17 | 122.2 |
| N4—C8—N5 | 104.68 (13) | C16—C17—H17 | 122.2 |
| N4—C8—H8A | 110.8 | C17—C18—C19 | 122.65 (16) |
| N5—C8—H8A | 110.8 | C17—C18—H18 | 118.7 |
| N4—C8—H8B | 110.8 | C19—C18—H18 | 118.7 |
| N5—C8—H8B | 110.8 | C20—C19—C18 | 121.58 (16) |
| H8A—C8—H8B | 108.9 | C20—C19—H19 | 119.2 |
| N4—C9—C14 | 99.64 (13) | C18—C19—H19 | 119.2 |
| N4—C9—C10 | 117.77 (14) | C19—C20—C21 | 117.01 (16) |
| C14—C9—C10 | 111.14 (14) | C19—C20—H20 | 121.5 |
| N4—C9—H9 | 109.3 | C21—C20—H20 | 121.5 |
| C14—C9—H9 | 109.3 | N8—C21—C16 | 108.80 (14) |
| C10—C9—H9 | 109.3 | N8—C21—C20 | 130.64 (16) |
| C9—C10—C11 | 107.98 (15) | C16—C21—C20 | 120.56 (15) |
| N3—C7—N4—C8 | 56.8 (4) | C8—N5—C15—N6 | 55.5 (4) |
| H··· | ||||
| C8—H8a···N6 | 0.97 | 2.55 | 2.970 (2) | 106 |
| C8—H8b···N3 | 0.97 | 2.58 | 2.995 (2) | 106 |
| C7—H7b···N1i | 0.97 | 2.38 | 3.301 (2) | 159 |
| C15—H15b···N7ii | 0.97 | 2.62 | 3.504 (2) | 151 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C7—H7b⋯N1i | 0.97 | 2.38 | 3.301 (2) | 159 |
| C15—H15b⋯N7ii | 0.97 | 2.62 | 3.504 (2) | 151 |
Symmetry codes: (i) ; (ii) .