Literature DB >> 21202540

Methyl 3-[(E)-1-(4-amino-phen-yl)ethyl-idene]dithio-carbazate.

Shang Shan1, Shan-Heng Wang, Yu-Liang Tian, Wen-Long Wang, Ying-Li Xu.   

Abstract

The title compound, C(10)n class="Species">H(13)N(3)S(2), was obtained from a condensation reaction of methyl dithio-carbazate and 4-amino-acetophenone. In the crystal structure, the nearly planar mol-ecule assumes an E configuration, the benzene ring and dithio-carbazate group being located on opposite sides of the N=C bond. C-H⋯π inter-actions and N-H⋯S hydrogen bonding are present in the crystal structure.

Entities:  

Year:  2008        PMID: 21202540      PMCID: PMC2961396          DOI: 10.1107/S160053680801283X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Okabe et al. (1993 ▶); Shan et al. (2003 ▶); Jiang (2007 ▶). For related structures, see: Shan et al. (2006 ▶); Zhang et al. (2005 ▶). For synthesis, see: Hu et al. (2001 ▶).

Experimental

Crystal data

C10H13N3S2 M = 239.35 Monoclinic, a = 10.8247 (12) Å b = 5.3673 (8) Å c = 20.4549 (14) Å β = 94.756 (12)° V = 1184.3 (2) Å3 Z = 4 Mo Kα radiation μ = 0.42 mm−1 T = 295 (2) K 0.32 × 0.22 × 0.20 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.870, T max = 0.926 10489 measured reflections 2682 independent reflections 1867 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.124 S = 1.07 2682 reflections 138 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.35 e Å−3 Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680801283X/om2229sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680801283X/om2229Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H13N3S2F000 = 504
Mr = 239.35Dx = 1.342 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 4876 reflections
a = 10.8247 (12) Åθ = 3.5–25.0º
b = 5.3673 (8) ŵ = 0.42 mm1
c = 20.4549 (14) ÅT = 295 (2) K
β = 94.756 (12)ºPrism, yellow
V = 1184.3 (2) Å30.32 × 0.22 × 0.20 mm
Z = 4
Rigaku R-AXIS RAPID IP diffractometer2682 independent reflections
Radiation source: fine-focus sealed tube1867 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.030
Detector resolution: 10.00 pixels mm-1θmax = 27.5º
T = 295(2) Kθmin = 3.4º
ω scansh = −14→14
Absorption correction: multi-scan(ABSCOR; Higashi, 1995)k = −6→6
Tmin = 0.870, Tmax = 0.926l = −26→26
10489 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.043H-atom parameters constrained
wR(F2) = 0.124  w = 1/[σ2(Fo2) + (0.0597P)2 + 0.2088P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max = 0.001
2682 reflectionsΔρmax = 0.32 e Å3
138 parametersΔρmin = −0.35 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.64254 (5)0.21562 (12)0.48386 (3)0.0615 (2)
S20.88535 (6)0.31459 (16)0.42531 (3)0.0800 (3)
N10.3499 (3)0.7090 (5)0.79285 (13)0.0946 (8)
H1A0.36350.80870.82810.114*
H1B0.30620.57730.80210.114*
N20.72126 (16)0.5566 (3)0.57515 (8)0.0535 (4)
N30.80638 (17)0.5371 (4)0.52873 (9)0.0581 (5)
H3N0.88450.61450.53420.070*
C10.63507 (19)0.7276 (4)0.66547 (10)0.0482 (5)
C20.6266 (2)0.9072 (4)0.71383 (10)0.0597 (6)
H20.68501.03460.71780.072*
C30.5336 (2)0.9013 (5)0.75625 (11)0.0671 (6)
H30.52981.02570.78760.081*
C40.4458 (2)0.7123 (5)0.75263 (11)0.0630 (6)
C50.4553 (2)0.5303 (5)0.70511 (13)0.0691 (6)
H50.39800.40090.70170.083*
C60.5470 (2)0.5376 (4)0.66329 (12)0.0615 (6)
H60.55090.41170.63230.074*
C70.73087 (18)0.7311 (4)0.61800 (10)0.0483 (5)
C80.8278 (2)0.9319 (4)0.62278 (12)0.0641 (6)
H8A0.86930.93570.58310.096*
H8B0.88700.89820.65930.096*
H8C0.78911.09010.62900.096*
C90.78466 (19)0.3662 (4)0.48112 (10)0.0539 (5)
C100.6466 (2)−0.0091 (5)0.41878 (12)0.0720 (7)
H10A0.64590.07600.37750.108*
H10B0.5753−0.11570.41860.108*
H10C0.7206−0.10740.42550.108*
U11U22U33U12U13U23
S10.0515 (3)0.0747 (4)0.0591 (3)−0.0119 (3)0.0090 (2)−0.0129 (3)
S20.0592 (4)0.1134 (6)0.0703 (4)−0.0144 (4)0.0219 (3)−0.0215 (4)
N10.0967 (18)0.0956 (18)0.0979 (17)0.0018 (14)0.0456 (14)−0.0022 (15)
N20.0518 (10)0.0545 (10)0.0548 (9)−0.0059 (8)0.0083 (8)−0.0056 (9)
N30.0511 (10)0.0621 (11)0.0621 (10)−0.0118 (8)0.0105 (8)−0.0079 (9)
C10.0488 (11)0.0440 (10)0.0508 (10)0.0030 (8)−0.0019 (8)−0.0002 (9)
C20.0680 (15)0.0529 (12)0.0571 (12)−0.0071 (10)−0.0020 (10)−0.0078 (11)
C30.0838 (17)0.0641 (15)0.0537 (12)0.0034 (13)0.0067 (11)−0.0091 (11)
C40.0675 (15)0.0632 (14)0.0598 (13)0.0122 (11)0.0133 (11)0.0077 (12)
C50.0653 (15)0.0559 (13)0.0884 (17)−0.0078 (11)0.0197 (12)−0.0053 (13)
C60.0618 (14)0.0502 (12)0.0738 (14)−0.0067 (10)0.0130 (11)−0.0143 (11)
C70.0469 (11)0.0439 (10)0.0526 (11)0.0002 (8)−0.0057 (8)0.0021 (9)
C80.0562 (13)0.0563 (13)0.0797 (15)−0.0096 (10)0.0048 (11)−0.0079 (12)
C90.0477 (11)0.0618 (13)0.0525 (11)−0.0013 (9)0.0055 (9)0.0025 (10)
C100.0718 (16)0.0774 (17)0.0662 (14)−0.0118 (13)0.0018 (12)−0.0185 (13)
S1—C91.743 (2)C2—H20.9300
S1—C101.800 (2)C3—C41.387 (4)
S2—C91.666 (2)C3—H30.9300
N1—C41.378 (3)C4—C51.388 (3)
N1—H1A0.9008C5—C61.364 (3)
N1—H1B0.8793C5—H50.9300
N2—C71.281 (3)C6—H60.9300
N2—N31.381 (2)C7—C81.501 (3)
N3—C91.345 (3)C8—H8A0.9600
N3—H3N0.9399C8—H8B0.9600
C1—C21.390 (3)C8—H8C0.9600
C1—C61.394 (3)C10—H10A0.9600
C1—C71.478 (3)C10—H10B0.9600
C2—C31.383 (3)C10—H10C0.9600
C9—S1—C10102.20 (11)C4—C5—H5119.4
C4—N1—H1A112.9C5—C6—C1122.2 (2)
C4—N1—H1B125.7C5—C6—H6118.9
H1A—N1—H1B111.1C1—C6—H6118.9
C7—N2—N3120.32 (17)N2—C7—C1114.74 (18)
C9—N3—N2117.59 (17)N2—C7—C8125.9 (2)
C9—N3—H3N119.2C1—C7—C8119.40 (18)
N2—N3—H3N122.0C7—C8—H8A109.5
C2—C1—C6116.4 (2)C7—C8—H8B109.5
C2—C1—C7123.35 (19)H8A—C8—H8B109.5
C6—C1—C7120.22 (19)C7—C8—H8C109.5
C3—C2—C1121.6 (2)H8A—C8—H8C109.5
C3—C2—H2119.2H8B—C8—H8C109.5
C1—C2—H2119.2N3—C9—S2121.66 (16)
C2—C3—C4121.0 (2)N3—C9—S1113.26 (15)
C2—C3—H3119.5S2—C9—S1125.07 (14)
C4—C3—H3119.5S1—C10—H10A109.5
N1—C4—C3121.6 (2)S1—C10—H10B109.5
N1—C4—C5120.8 (2)H10A—C10—H10B109.5
C3—C4—C5117.5 (2)S1—C10—H10C109.5
C6—C5—C4121.3 (2)H10A—C10—H10C109.5
C6—C5—H5119.4H10B—C10—H10C109.5
C7—N2—N3—C9−173.50 (19)N3—N2—C7—C1−178.93 (17)
C6—C1—C2—C3−1.8 (3)N3—N2—C7—C81.7 (3)
C7—C1—C2—C3178.2 (2)C2—C1—C7—N2−177.2 (2)
C1—C2—C3—C41.0 (4)C6—C1—C7—N22.9 (3)
C2—C3—C4—N1−177.5 (2)C2—C1—C7—C82.3 (3)
C2—C3—C4—C50.1 (4)C6—C1—C7—C8−177.7 (2)
N1—C4—C5—C6177.3 (2)N2—N3—C9—S2−176.19 (15)
C3—C4—C5—C6−0.3 (4)N2—N3—C9—S15.0 (2)
C4—C5—C6—C1−0.6 (4)C10—S1—C9—N3−176.49 (17)
C2—C1—C6—C51.6 (3)C10—S1—C9—S24.73 (19)
C7—C1—C6—C5−178.4 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1A···S2i0.902.833.722 (3)170
N3—H3N···S2ii0.942.593.483 (2)159
C10—H10A···Cgiii0.962.803.538 (3)134
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯S2i0.902.833.722 (3)170
N3—H3N⋯S2ii0.942.593.483 (2)159
C10—H10ACgiii0.962.803.538 (3)134

Symmetry codes: (i) ; (ii) ; (iii) . Cg is the centroid of the benzene ring.

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Benzaldehyde 2,4-dinitrophenylhydrazone.

Authors:  Shang Shan; Duan-Jun Xu; Chen-Hsiung Hung; Jing-Yun Wu; Michael Y Chiang
Journal:  Acta Crystallogr C       Date:  2003-02-18       Impact factor: 1.172

  2 in total
  1 in total

1.  Methyl (E)-3-(2-bromo-4,5-dimeth-oxy-benzyl-idene)dithio-carbazate.

Authors:  Zheng Fan; Yan-Lan Huang; Fang Tong; Yi-Wei Huang; Shang Shan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-12
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.