Literature DB >> 22215010

[NSI+] determinant has a pleiotropic phenotypic manifestation that is modulated by SUP35, SUP45, and VTS1 genes.

Anton A Nizhnikov1, Zalina M Magomedova, Alexandr A Rubel, Alexandra M Kondrashkina, Sergey G Inge-Vechtomov, Alexey P Galkin.   

Abstract

We recently discovered the novel non-chromosomal determinant in Saccharomyces cerevisiae [NSI(+)] (nonsense suppression inducer), which causes omnipotent nonsense suppression in strains where the Sup35 N-terminal domain is deleted. [NSI(+)] possesses yeast prion features and does not correspond to previously identified yeast prion determinants. Here, we show that [NSI(+)] enhances nonsense codon read-through and inhibits vegetative growth in S. cerevisiae. Using a large-scale overexpression screen to identify genes that impact the phenotypic effects of [NSI(+)], we found that the SUP35 and SUP45 genes encoding the translation termination factors eRF3 and eRF1, respectively, modulate nonsense suppression in [NSI(+)] strains. The VTS1 gene encodes an NQ-enriched RNA-binding protein that enhances nonsense suppression in [NSI(+)] and [nsi(-)] strains. We demonstrate that VTS1 overexpression, like [NSI(+)] induction, causes translational read-through and growth defects in S. cerevisiae.

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Year:  2012        PMID: 22215010     DOI: 10.1007/s00294-011-0363-1

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  44 in total

Review 1.  The molecular basis of amyloidosis.

Authors:  L C Serpell; M Sunde; C C Blake
Journal:  Cell Mol Life Sci       Date:  1997-12       Impact factor: 9.261

2.  The eukaryotic polypeptide chain releasing factor (eRF3/GSPT) carrying the translation termination signal to the 3'-Poly(A) tail of mRNA. Direct association of erf3/GSPT with polyadenylate-binding protein.

Authors:  S Hoshino; M Imai; T Kobayashi; N Uchida; T Katada
Journal:  J Biol Chem       Date:  1999-06-11       Impact factor: 5.157

3.  Role of the chaperone protein Hsp104 in propagation of the yeast prion-like factor [psi+].

Authors:  Y O Chernoff; S L Lindquist; B Ono; S G Inge-Vechtomov; S W Liebman
Journal:  Science       Date:  1995-05-12       Impact factor: 47.728

4.  Multiple Gln/Asn-rich prion domains confer susceptibility to induction of the yeast [PSI(+)] prion.

Authors:  L Z Osherovich; J S Weissman
Journal:  Cell       Date:  2001-07-27       Impact factor: 41.582

5.  [NSI (+)]: a novel non-Mendelian nonsense suppressor determinant in Saccharomyces cerevisiae.

Authors:  Alsu F Saifitdinova; Anton A Nizhnikov; Artem G Lada; Alexandr A Rubel; Zalina M Magomedova; Valentina V Ignatova; Sergey G Inge-Vechtomov; Alexey P Galkin
Journal:  Curr Genet       Date:  2010-07-29       Impact factor: 3.886

6.  Detection of specific polymerase chain reaction product by utilizing the 5'----3' exonuclease activity of Thermus aquaticus DNA polymerase.

Authors:  P M Holland; R D Abramson; R Watson; D H Gelfand
Journal:  Proc Natl Acad Sci U S A       Date:  1991-08-15       Impact factor: 11.205

7.  New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae.

Authors:  A Wach; A Brachat; R Pöhlmann; P Philippsen
Journal:  Yeast       Date:  1994-12       Impact factor: 3.239

8.  Elongation factor eEF1B modulates functions of the release factors eRF1 and eRF3 and the efficiency of translation termination in yeast.

Authors:  Igor A Valouev; Gleb V Fominov; Elizaveta E Sokolova; Vladimir N Smirnov; Michael D Ter-Avanesyan
Journal:  BMC Mol Biol       Date:  2009-06-22       Impact factor: 2.946

9.  A systematic survey identifies prions and illuminates sequence features of prionogenic proteins.

Authors:  Simon Alberti; Randal Halfmann; Oliver King; Atul Kapila; Susan Lindquist
Journal:  Cell       Date:  2009-04-03       Impact factor: 41.582

10.  The products of the SUP45 (eRF1) and SUP35 genes interact to mediate translation termination in Saccharomyces cerevisiae.

Authors:  I Stansfield; K M Jones; V V Kushnirov; A R Dagkesamanskaya; A I Poznyakovski; S V Paushkin; C R Nierras; B S Cox; M D Ter-Avanesyan; M F Tuite
Journal:  EMBO J       Date:  1995-09-01       Impact factor: 11.598

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  8 in total

Review 1.  Prions and the concept of polyprionic inheritance.

Authors:  Alexey P Galkin
Journal:  Curr Genet       Date:  2017-03-04       Impact factor: 3.886

Review 2.  Prions, amyloids, and RNA: Pieces of a puzzle.

Authors:  Anton A Nizhnikov; Kirill S Antonets; Stanislav A Bondarev; Sergey G Inge-Vechtomov; Irina L Derkatch
Journal:  Prion       Date:  2016-05-03       Impact factor: 3.931

Review 3.  Modulation of efficiency of translation termination in Saccharomyces cerevisiae.

Authors:  Anton A Nizhnikov; Kirill S Antonets; Sergey G Inge-Vechtomov; Irina L Derkatch
Journal:  Prion       Date:  2014-11-01       Impact factor: 3.931

4.  Interaction of Prions Causes Heritable Traits in Saccharomyces cerevisiae.

Authors:  Anton A Nizhnikov; Tatyana A Ryzhova; Kirill V Volkov; Sergey P Zadorsky; Julia V Sopova; Sergey G Inge-Vechtomov; Alexey P Galkin
Journal:  PLoS Genet       Date:  2016-12-27       Impact factor: 5.917

5.  RNA Sequencing Reveals Specific TranscriptomicSignatures Distinguishing Effects of the [SWI⁺] Prion and SWI1 Deletion in Yeast Saccharomyces cerevisiae.

Authors:  Yury V Malovichko; Kirill S Antonets; Anna R Maslova; Elena A Andreeva; Sergey G Inge-Vechtomov; Anton A Nizhnikov
Journal:  Genes (Basel)       Date:  2019-03-12       Impact factor: 4.096

6.  Elucidating the regulatory mechanism of Swi1 prion in global transcription and stress responses.

Authors:  Zhiqiang Du; Jeniece Regan; Elizabeth Bartom; Wei-Sheng Wu; Li Zhang; Dustin Kenneth Goncharoff; Liming Li
Journal:  Sci Rep       Date:  2020-12-14       Impact factor: 4.379

Review 7.  Saccharomyces cerevisiae in neuroscience: how unicellular organism helps to better understand prion protein?

Authors:  Takao Ishikawa
Journal:  Neural Regen Res       Date:  2021-03       Impact factor: 5.135

Review 8.  Protein Co-Aggregation Related to Amyloids: Methods of Investigation, Diversity, and Classification.

Authors:  Stanislav A Bondarev; Kirill S Antonets; Andrey V Kajava; Anton A Nizhnikov; Galina A Zhouravleva
Journal:  Int J Mol Sci       Date:  2018-08-04       Impact factor: 5.923

  8 in total

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