Literature DB >> 22203568

Gramella jeungdoensis sp. nov., isolated from a solar saltern in Korea.

Yochan Joung1, Haneul Kim, Taeyong Jang, Tae-Seok Ahn, Kiseong Joh.   

Abstract

A non-motile, Gram-stain-negative, yellow pigmented, rod-shaped bacterium, strain HMD3159(T), was isolated from a solar saltern in Korea. The major fatty acids were iso-C(15:0) (26.3%), iso-C(17:0) 3OH (12.1%), iso-C(16:0) (12.0%), summed feature 3 (comprising C(16:1) ω7c and/or C(16:1) ω6c; 11.0%) and summed feature 9 (iso-C17:1 ω9c and/or 10-methyl C(16:0); 10.0%). The major respiratory quinone was MK-6. The DNA G+C content was 40.9 mol%. The phylogenetic tree based on 16S rRNA gene sequences showed that strain HMD3159(T) formed a lineage within the genus Gramella and closely related to Gramella gaetbulicola (95.5% sequence similarity), Gramella portivictoriae (94.9%), Gramella echinicola (94.6%), and Gramella marina (93.6%). On the basis of the evidence presented in this study, strain HMD3159(T) represents a novel species of the genus Gramella, for which the name Gramella jeungdoensis sp. nov., is proposed. The type strain is HMD3159(T) (=KCTC 32123(T) =CECT 7683(T)).

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 22203568     DOI: 10.1007/s12275-011-1192-0

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  12 in total

1.  EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences.

Authors:  Jongsik Chun; Jae-Hak Lee; Yoonyoung Jung; Myungjin Kim; Seil Kim; Byung Kwon Kim; Young-Woon Lim
Journal:  Int J Syst Evol Microbiol       Date:  2007-10       Impact factor: 2.747

2.  MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.

Authors:  Koichiro Tamura; Joel Dudley; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2007-05-07       Impact factor: 16.240

3.  Gramella marina sp. nov., isolated from the sea urchin Strongylocentrotus intermedius.

Authors:  Olga I Nedashkovskaya; Seung Bum Kim; Kyung Sook Bae
Journal:  Int J Syst Evol Microbiol       Date:  2010-01-15       Impact factor: 2.747

4.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  Gramella echinicola gen. nov., sp. nov., a novel halophilic bacterium of the family Flavobacteriaceae isolated from the sea urchin Strongylocentrotus intermedius.

Authors:  Olga I Nedashkovskaya; Seung Bum Kim; Anatoly M Lysenko; Galina M Frolova; Valery V Mikhailov; Kyung Sook Bae; Dong Hyuck Lee; In Seop Kim
Journal:  Int J Syst Evol Microbiol       Date:  2005-01       Impact factor: 2.747

7.  Gramella portivictoriae sp. nov., a novel member of the family Flavobacteriaceae isolated from marine sediment.

Authors:  Stanley C K Lau; Mandy M Y Tsoi; Xiancui Li; Ioulia Plakhotnikova; Sergey Dobretsov; Po-Keung Wong; Pei-Yuan Qian
Journal:  Int J Syst Evol Microbiol       Date:  2005-11       Impact factor: 2.747

8.  Measurement of deoxyguanosine/thymidine ratios in complex mixtures by high-performance liquid chromatography for determination of the mole percentage guanine + cytosine of DNA.

Authors:  M Mesbah; W B Whitman
Journal:  J Chromatogr       Date:  1989-10-06

9.  Gramella gaetbulicola sp. nov., a member of the family Flavobacteriaceae isolated from foreshore soil.

Authors:  Sung-Heun Cho; Song-Hee Chae; Myoungho Cho; Tae-Ui Kim; Seri Choi; Ji-Hye Han; Young Tae Kim; Yochan Joung; Kiseong Joh; Olga I Nedashkovskaya; Seung Bum Kim
Journal:  Int J Syst Evol Microbiol       Date:  2010-12-10       Impact factor: 2.747

10.  Parvularcula bermudensis gen. nov., sp. nov., a marine bacterium that forms a deep branch in the alpha-Proteobacteria.

Authors:  Jang-Cheon Cho; Stephen J Giovannoni
Journal:  Int J Syst Evol Microbiol       Date:  2003-07       Impact factor: 2.747

View more
  2 in total

1.  Gramella lutea sp. nov., a Novel Species of the Family Flavobacteriaceae Isolated from Marine Sediment.

Authors:  Jaewoo Yoon; Yujin Jo; Geum Jin Kim; Hyukjae Choi
Journal:  Curr Microbiol       Date:  2015-06-02       Impact factor: 2.188

2.  Gramella fulva sp. nov., isolated from a dry surface of tidal flat.

Authors:  Sae Hyun Hwang; Woon Mo Hwang; Keunsoo Kang; Tae-Young Ahn
Journal:  J Microbiol       Date:  2018-11-19       Impact factor: 3.422

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.